Gene annotation
| Transcriptome id | Sobic.004G299300.4,Sobic.004G299300.1,Sobic.004G299300.2,Sobic.004G299300.3 |
|---|---|
| Synonym | Sb04g033310 |
| Functional annotation | protein kinase domain containing protein, expressed |
| UniProt | A0A1Z5RPQ3 , C5XS26 , A0A1Z5RPQ6 , A0A194YS92 |
| Pfam | PF00069 PF07714 |
| Panther DB | PTHR27001 PTHR27001:SF228 |
| NCBI CDD | KOG1187; Serine/threonine protein kinase KOG2345Serine/threonine protein kinase/TGF-beta stimulated factor |
| KEGG Orthology | - |
| Gene Ontology | GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity |
Orthologs (automatic annotation)
| TAIR | AT5G47070 : Protein kinase superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os02g43430.1 : protein kinase domain containing protein, expressed |
| MaizeGDB (Corn) | Zm00025a032171 , Zm00025a010358 |
| Brachypodium | KQK17540 , PNT75574 , KQK17539 |
| Barley | HORVU7Hr1G091520.10 , HORVU7Hr1G091520.11 , HORVU7Hr1G091520.8 , HORVU7Hr1G091520.9 , HORVU7Hr1G091520.1 , HORVU7Hr1G091520.2 , HORVU7Hr1G091520.3 , HORVU7Hr1G091520.4 , HORVU7Hr1G091520.5 , HORVU7Hr1G091520.6 , HORVU7Hr1G091520.7 , HORVU6Hr1G061470.4 , HORVU6Hr1G061470.6 , HORVU6Hr1G061470.1 , HORVU6Hr1G061470.2 , HORVU6Hr1G061470.3 |
| Wheat | TraesCS6D02G223300 , TraesCS6B02G283600 , TraesCS6B02G283600 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G128100 | ATP-binding cassette sub-family E member 1, putative, expressed | K06174: ABCE1, ATP-binding cassette, sub-family E, member 1 |
| 2 | Sobic.009G105500 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@D-mannose binding lectin family protein, expressed | - |
| 3 | Sobic.006G058400 | Trihelix Family(PubMedID : 24864043)@transcription factor, putative, expressed | - |
| 4 | Sobic.004G087700 | pleiotropic drug resistance protein, putative, expressed | - |
| 5 | Sobic.003G267300 | "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed | K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1 |
| 6 | Sobic.003G413600 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@potassium transporter, putative, expressed | K03549: KUP system potassium uptake protein |
| 7 | Sobic.003G279700 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein | - |
| 8 | Sobic.009G140150 | - | K08472: mlo protein |
| 9 | Sobic.009G027200 | tetraspanin family protein, putative, expressed | - |
| 10 | Sobic.003G097000 | expressed protein | - |
| 11 | Sobic.003G358100 | O-fucosyltransferase family protein(PubMedID : 26465154)@growth regulator related protein, putative, expressed | - |
| 12 | Sobic.010G132100 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@thioredoxin domain-containing protein 17, putative, expressed | - |
| 13 | Sobic.001G087800 | expressed protein | - |
| 14 | Sobic.001G291400 | methyltransferase, putative, expressed | - |
| 15 | Sobic.009G178650 | - | - |
| 16 | Sobic.004G206050 | - | - |
| 17 | Sobic.003G444900 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ankyrin repeat domain-containing protein 28, putative, expressed | - |
| 18 | Sobic.001G235600 | - | - |
| 19 | Sobic.009G077901 | - | - |
| 20 | Sobic.002G108900 | transporter family protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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