Gene annotation
Transcriptome id Sobic.004G128100.1
Synonym Sb04g011050, ATRLI2, RLI2
Functional annotation ATP-binding cassette sub-family E member 1, putative, expressed
UniProt A0A194YQE8
Pfam PF04068 PF00037 PF00005
Panther DB PTHR19248 PTHR19248:SF18
NCBI CDD -
KEGG Orthology K06174; ABCE1, ATP-binding cassette, sub-family E, member 1
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT4G19210 : RNAse l inhibitor protein 2
RAP-DB (Rice) LOC_Os02g18180.1 : ATP-binding cassette sub-family E member 1, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ94415
Barley -
Wheat TraesCS7B02G045400
Populus PNT42874 , PNT42873


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G056100 HIRAN domain containing protein, putative, expressed K15363: FAN1, fanconi-associated nuclease 1
2 Sobic.004G299300 protein kinase domain containing protein, expressed -
3 Sobic.009G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@D-mannose binding lectin family protein, expressed -
4 Sobic.003G097000 expressed protein -
5 Sobic.004G199500 CRP12 - Cysteine-rich family protein precursor, expressed -
6 Sobic.009G027200 tetraspanin family protein, putative, expressed -
7 Sobic.001G041900 phospholipase, patatin family, putative, expressed K14674: TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase
8 Sobic.003G301400 DNA-directed polymerase, putative, expressed K03509: DNA polymerase eta
9 Sobic.003G395600 CorA-like magnesium transporter protein, putative, expressed K16075: MRS2, magnesium transporter
10 Sobic.007G113101 - -
11 Sobic.001G092250 - -
12 Sobic.003G358100 O-fucosyltransferase family protein(PubMedID : 26465154)@growth regulator related protein, putative, expressed -
13 Sobic.008G014400 expressed protein -
14 Sobic.010G117000 anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
15 Sobic.004G304700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin receptor-type protein kinase, putative, expressed -
16 Sobic.007G085400 NBS-LRR disease resistance protein, putative, expressed -
17 Sobic.008G093300 - -
18 Sobic.003G413600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
19 Sobic.002G375200 expressed protein -
20 Sobic.010G026850 - -


Gene co-expression network
sample Sobic004G128100 Sobic004G128100 Sobic010G056100 Sobic010G056100 Sobic004G128100--Sobic010G056100 Sobic004G299300 Sobic004G299300 Sobic004G128100--Sobic004G299300 Sobic009G105500 Sobic009G105500 Sobic004G128100--Sobic009G105500 Sobic003G097000 Sobic003G097000 Sobic004G128100--Sobic003G097000 Sobic004G199500 Sobic004G199500 Sobic004G128100--Sobic004G199500 Sobic009G027200 Sobic009G027200 Sobic004G128100--Sobic009G027200 Sobic001G041900 Sobic001G041900 Sobic004G128100--Sobic001G041900 Sobic003G301400 Sobic003G301400 Sobic004G128100--Sobic003G301400 Sobic003G395600 Sobic003G395600 Sobic004G128100--Sobic003G395600 Sobic010G056100--Sobic004G128100 Sobic010G066200 Sobic010G066200 Sobic010G056100--Sobic010G066200 Sobic010G056100--Sobic003G301400 Sobic006G141100 Sobic006G141100 Sobic010G056100--Sobic006G141100 Sobic002G284600 Sobic002G284600 Sobic010G056100--Sobic002G284600 Sobic010G063433 Sobic010G063433 Sobic010G056100--Sobic010G063433 Sobic003G077600 Sobic003G077600 Sobic010G056100--Sobic003G077600 Sobic010G056100--Sobic003G395600 Sobic001G192900 Sobic001G192900 Sobic010G056100--Sobic001G192900 Sobic004G299300--Sobic004G128100 Sobic004G299300--Sobic009G105500 Sobic006G058400 Sobic006G058400 Sobic004G299300--Sobic006G058400 Sobic004G087700 Sobic004G087700 Sobic004G299300--Sobic004G087700 Sobic003G267300 Sobic003G267300 Sobic004G299300--Sobic003G267300 Sobic003G413600 Sobic003G413600 Sobic004G299300--Sobic003G413600 Sobic003G279700 Sobic003G279700 Sobic004G299300--Sobic003G279700 Sobic009G140150 Sobic009G140150 Sobic004G299300--Sobic009G140150 Sobic004G299300--Sobic009G027200 Sobic009G105500--Sobic004G299300 Sobic009G105500--Sobic004G128100 Sobic009G105500--Sobic009G140150 Sobic009G105500--Sobic003G413600 Sobic009G105500--Sobic006G058400 Sobic001G491800 Sobic001G491800 Sobic009G105500--Sobic001G491800 Sobic009G105500--Sobic004G087700 Sobic009G148800 Sobic009G148800 Sobic009G105500--Sobic009G148800 Sobic009G105500--Sobic003G097000 Sobic006G272000 Sobic006G272000 Sobic003G097000--Sobic006G272000 Sobic002G334800 Sobic002G334800 Sobic003G097000--Sobic002G334800 Sobic001G107550 Sobic001G107550 Sobic003G097000--Sobic001G107550 Sobic002G074900 Sobic002G074900 Sobic003G097000--Sobic002G074900 Sobic003G413700 Sobic003G413700 Sobic003G097000--Sobic003G413700 Sobic001G373850 Sobic001G373850 Sobic003G097000--Sobic001G373850 Sobic009G077000 Sobic009G077000 Sobic003G097000--Sobic009G077000 Sobic009G210250 Sobic009G210250 Sobic003G097000--Sobic009G210250 Sobic002G009000 Sobic002G009000 Sobic003G097000--Sobic002G009000 Sobic008G123700 Sobic008G123700 Sobic004G199500--Sobic008G123700 Sobic009G206900 Sobic009G206900 Sobic004G199500--Sobic009G206900 Sobic008G142450 Sobic008G142450 Sobic004G199500--Sobic008G142450 Sobic001G452800 Sobic001G452800 Sobic004G199500--Sobic001G452800 Sobic006G090450 Sobic006G090450 Sobic004G199500--Sobic006G090450 Sobic004G233100 Sobic004G233100 Sobic004G199500--Sobic004G233100 Sobic001G509901 Sobic001G509901 Sobic004G199500--Sobic001G509901 Sobic001G490350 Sobic001G490350 Sobic004G199500--Sobic001G490350 Sobic002G071201 Sobic002G071201 Sobic004G199500--Sobic002G071201 Sobic006G217400 Sobic006G217400 Sobic009G027200--Sobic006G217400 Sobic007G200700 Sobic007G200700 Sobic009G027200--Sobic007G200700 Sobic003G226600 Sobic003G226600 Sobic009G027200--Sobic003G226600 Sobic008G093300 Sobic008G093300 Sobic009G027200--Sobic008G093300 Sobic004G115100 Sobic004G115100 Sobic009G027200--Sobic004G115100 Sobic006G029850 Sobic006G029850 Sobic009G027200--Sobic006G029850 Sobic001G207301 Sobic001G207301 Sobic009G027200--Sobic001G207301 Sobic006G035350 Sobic006G035350 Sobic009G027200--Sobic006G035350 Sobic008G100201 Sobic008G100201 Sobic009G027200--Sobic008G100201 Sobic009G050600 Sobic009G050600 Sobic001G041900--Sobic009G050600 Sobic006G095100 Sobic006G095100 Sobic001G041900--Sobic006G095100 Sobic004G023600 Sobic004G023600 Sobic001G041900--Sobic004G023600 Sobic001G041900--Sobic004G199500 Sobic001G041900--Sobic001G207301 Sobic001G041900--Sobic004G128100 Sobic001G102200 Sobic001G102200 Sobic001G041900--Sobic001G102200 Sobic007G130500 Sobic007G130500 Sobic001G041900--Sobic007G130500 Sobic001G041900--Sobic009G027200 Sobic003G301400--Sobic003G395600 Sobic003G301400--Sobic010G056100 Sobic010G195100 Sobic010G195100 Sobic003G301400--Sobic010G195100 Sobic003G301400--Sobic002G284600 Sobic009G184900 Sobic009G184900 Sobic003G301400--Sobic009G184900 Sobic007G177700 Sobic007G177700 Sobic003G301400--Sobic007G177700 Sobic003G301400--Sobic004G128100 Sobic003G292500 Sobic003G292500 Sobic003G301400--Sobic003G292500 Sobic001G215700 Sobic001G215700 Sobic003G301400--Sobic001G215700 Sobic003G395600--Sobic003G301400 Sobic003G395600--Sobic002G284600 Sobic008G083600 Sobic008G083600 Sobic003G395600--Sobic008G083600 Sobic003G395600--Sobic001G215700 Sobic003G395600--Sobic007G177700 Sobic003G009501 Sobic003G009501 Sobic003G395600--Sobic003G009501 Sobic003G395600--Sobic010G056100 Sobic003G395600--Sobic010G195100 Sobic003G395600--Sobic004G128100
Octagon: transcription factors


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