Gene annotation
Transcriptome id Sobic.004G304700.1
Synonym RLK, Sb04g033790
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
lectin receptor-type protein kinase, putative, expressed
UniProt C5XSQ1
Pfam PF00069 PF00139
Panther DB PTHR27007 PTHR27007:SF3
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G37710 : receptor lectin kinase
RAP-DB (Rice) LOC_Os02g42780.1 : lectin receptor-type protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a056577 , Zm00025a004289
Brachypodium KQJ96881 , PNT69125 , PNT61549 , PNT61550
Barley HORVU2Hr1G014890.2 , HORVU2Hr1G014890.3 , HORVU2Hr1G014890.1 , HORVU6Hr1G060540.1 , HORVU5Hr1G104840.1 , HORVU5Hr1G104840.2 , HORVU6Hr1G053120.2 , HORVU6Hr1G053120.1 , HORVU2Hr1G091360.2 , HORVU2Hr1G091360.1
Wheat TraesCS6B02G236500 , TraesCS2D02G137300 , TraesCS2B02G158800 , TraesCS2D02G137200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G073600 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by BR treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
2 Sobic.001G137900 cytochrome P450, putative, expressed -
3 Sobic.002G033550 - -
4 Sobic.002G224900 gibberellin receptor GID1L2, putative, expressed -
5 Sobic.001G413300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
6 Sobic.002G153600 expressed protein -
7 Sobic.004G169401 - -
8 Sobic.003G105200 ethylene-responsive protein related, putative, expressed -
9 Sobic.006G232100 expressed protein -
10 Sobic.001G094100 - -
11 Sobic.010G276850 - -
12 Sobic.008G123700 expressed protein -
13 Sobic.002G142400 - -
14 Sobic.006G148400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK51 - OsWAK receptor-like protein kinase, expressed -
15 Sobic.003G120900 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.001G224500 - -
17 Sobic.004G291300 expressed protein -
18 Sobic.006G200650 - -
19 Sobic.004G269300 - -
20 Sobic.003G351501 - -


Gene co-expression network
sample Sobic004G304700 Sobic004G304700 Sobic004G073600 Sobic004G073600 Sobic004G304700--Sobic004G073600 Sobic001G137900 Sobic001G137900 Sobic004G304700--Sobic001G137900 Sobic002G033550 Sobic002G033550 Sobic004G304700--Sobic002G033550 Sobic002G224900 Sobic002G224900 Sobic004G304700--Sobic002G224900 Sobic001G413300 Sobic001G413300 Sobic004G304700--Sobic001G413300 Sobic002G153600 Sobic002G153600 Sobic004G304700--Sobic002G153600 Sobic004G169401 Sobic004G169401 Sobic004G304700--Sobic004G169401 Sobic003G105200 Sobic003G105200 Sobic004G304700--Sobic003G105200 Sobic006G232100 Sobic006G232100 Sobic004G304700--Sobic006G232100 Sobic004G073600--Sobic001G137900 Sobic004G291300 Sobic004G291300 Sobic004G073600--Sobic004G291300 Sobic004G073600--Sobic002G033550 Sobic005G020501 Sobic005G020501 Sobic004G073600--Sobic005G020501 Sobic007G115700 Sobic007G115700 Sobic004G073600--Sobic007G115700 Sobic006G279600 Sobic006G279600 Sobic004G073600--Sobic006G279600 Sobic006G174050 Sobic006G174050 Sobic004G073600--Sobic006G174050 Sobic005G152866 Sobic005G152866 Sobic004G073600--Sobic005G152866 Sobic004G199100 Sobic004G199100 Sobic004G073600--Sobic004G199100 Sobic001G137900--Sobic002G033550 Sobic001G137900--Sobic004G199100 Sobic008G123700 Sobic008G123700 Sobic001G137900--Sobic008G123700 Sobic002G109700 Sobic002G109700 Sobic001G137900--Sobic002G109700 Sobic001G137900--Sobic004G291300 Sobic002G121201 Sobic002G121201 Sobic001G137900--Sobic002G121201 Sobic002G199300 Sobic002G199300 Sobic001G137900--Sobic002G199300 Sobic009G106601 Sobic009G106601 Sobic001G137900--Sobic009G106601 Sobic003G143600 Sobic003G143600 Sobic001G137900--Sobic003G143600 Sobic002G033550--Sobic001G137900 Sobic002G033550--Sobic001G413300 Sobic002G033550--Sobic004G199100 Sobic002G033550--Sobic006G279600 Sobic002G033550--Sobic003G143600 Sobic003G169700 Sobic003G169700 Sobic002G033550--Sobic003G169700 Sobic003G208200 Sobic003G208200 Sobic002G033550--Sobic003G208200 Sobic002G033550--Sobic009G106601 Sobic005G019250 Sobic005G019250 Sobic002G033550--Sobic005G019250 Sobic001G489550 Sobic001G489550 Sobic002G224900--Sobic001G489550 Sobic002G423901 Sobic002G423901 Sobic002G224900--Sobic002G423901 Sobic010G008433 Sobic010G008433 Sobic002G224900--Sobic010G008433 Sobic007G223250 Sobic007G223250 Sobic002G224900--Sobic007G223250 Sobic005G093901 Sobic005G093901 Sobic002G224900--Sobic005G093901 Sobic004G320900 Sobic004G320900 Sobic002G224900--Sobic004G320900 Sobic001G472050 Sobic001G472050 Sobic002G224900--Sobic001G472050 Sobic002G288700 Sobic002G288700 Sobic002G224900--Sobic002G288700 Sobic010G102700 Sobic010G102700 Sobic002G224900--Sobic010G102700 Sobic001G413300--Sobic003G208200 Sobic003G351501 Sobic003G351501 Sobic001G413300--Sobic003G351501 Sobic001G413300--Sobic003G169700 Sobic007G085400 Sobic007G085400 Sobic001G413300--Sobic007G085400 Sobic001G413300--Sobic002G033550 Sobic001G224500 Sobic001G224500 Sobic001G413300--Sobic001G224500 Sobic001G373850 Sobic001G373850 Sobic001G413300--Sobic001G373850 Sobic002G245700 Sobic002G245700 Sobic001G413300--Sobic002G245700 Sobic003G161900 Sobic003G161900 Sobic001G413300--Sobic003G161900 Sobic002G153600--Sobic006G232100 Sobic003G142800 Sobic003G142800 Sobic002G153600--Sobic003G142800 Sobic006G217400 Sobic006G217400 Sobic002G153600--Sobic006G217400 Sobic004G130500 Sobic004G130500 Sobic002G153600--Sobic004G130500 Sobic006G035350 Sobic006G035350 Sobic002G153600--Sobic006G035350 Sobic004G127733 Sobic004G127733 Sobic002G153600--Sobic004G127733 SobicK031400 SobicK031400 Sobic002G153600--SobicK031400 Sobic004G260250 Sobic004G260250 Sobic002G153600--Sobic004G260250 Sobic010G132400 Sobic010G132400 Sobic002G153600--Sobic010G132400 Sobic004G169401--Sobic002G245700 Sobic007G199901 Sobic007G199901 Sobic004G169401--Sobic007G199901 Sobic007G023000 Sobic007G023000 Sobic004G169401--Sobic007G023000 Sobic004G169401--Sobic001G413300 Sobic004G169401--Sobic003G208200 Sobic008G129500 Sobic008G129500 Sobic004G169401--Sobic008G129500 Sobic004G169401--Sobic001G224500 Sobic004G169401--Sobic003G351501 Sobic004G169401--Sobic001G373850 Sobic006G200650 Sobic006G200650 Sobic003G105200--Sobic006G200650 Sobic009G188200 Sobic009G188200 Sobic003G105200--Sobic009G188200 Sobic002G142400 Sobic002G142400 Sobic003G105200--Sobic002G142400 Sobic003G436100 Sobic003G436100 Sobic003G105200--Sobic003G436100 Sobic009G097500 Sobic009G097500 Sobic003G105200--Sobic009G097500 Sobic003G105200--Sobic001G224500 Sobic006G239200 Sobic006G239200 Sobic003G105200--Sobic006G239200 Sobic002G334700 Sobic002G334700 Sobic003G105200--Sobic002G334700 Sobic002G305900 Sobic002G305900 Sobic003G105200--Sobic002G305900 Sobic006G232100--Sobic003G142800 Sobic006G232100--Sobic002G153600 Sobic006G232100--Sobic010G132400 Sobic006G232100--Sobic004G130500 Sobic003G186066 Sobic003G186066 Sobic006G232100--Sobic003G186066 Sobic003G119200 Sobic003G119200 Sobic006G232100--Sobic003G119200 Sobic006G232100--Sobic004G260250 Sobic005G176300 Sobic005G176300 Sobic006G232100--Sobic005G176300 Sobic010G174000 Sobic010G174000 Sobic006G232100--Sobic010G174000
Octagon: transcription factors


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