Gene annotation
Transcriptome id Sobic.001G041900.2,Sobic.001G041900.1
Synonym SDP1, Sb01g003870
Functional annotation phospholipase, patatin family, putative, expressed
UniProt A0A1Z5S492 , C5WW05
Pfam PF01734 PF11815
Panther DB PTHR14226 PTHR14226:SF30
NCBI CDD -
KEGG Orthology K14674; TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase
Gene Ontology GO:0006629; lipid metabolic process GO:0004806triglyceride lipase activity


Orthologs (automatic annotation)
TAIR AT5G04040 : Patatin-like phospholipase family protein
RAP-DB (Rice) LOC_Os03g59620.1 : phospholipase, patatin family, putative, expressed
MaizeGDB (Corn) Zm00025a008735
Brachypodium KQK12534 , KQK12533
Barley HORVU5Hr1G111180.4 , HORVU5Hr1G111180.3 , HORVU5Hr1G111180.2 , HORVU5Hr1G111180.1
Wheat TraesCS5A02G465200 , TraesCS5D02G477800 , TraesCS5B02G477000 , TraesCS5D02G477800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G050600 GATA zinc finger domain containing protein, expressed -
2 Sobic.006G095100 ORG4, putative, expressed -
3 Sobic.004G023600 expressed protein -
4 Sobic.004G199500 CRP12 - Cysteine-rich family protein precursor, expressed -
5 Sobic.001G207301 - -
6 Sobic.004G128100 ATP-binding cassette sub-family E member 1, putative, expressed K06174: ABCE1, ATP-binding cassette, sub-family E, member 1
7 Sobic.001G102200 expressed protein -
8 Sobic.007G130500 cation efflux family protein, putative, expressed K14692: SLC30A5_7, ZNT5_7, MTP, solute carrier family 30 (zinc transporter), member 5/7
9 Sobic.009G027200 tetraspanin family protein, putative, expressed -
10 Sobic.003G340200 - -
11 Sobic.004G061100 - -
12 Sobic.010G026850 - -
13 Sobic.007G028300 - -
14 Sobic.006G205800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@plant protein of unknown function domain containing protein, expressed -
15 Sobic.001G397550 - -
16 Sobic.002G088300 expressed protein -
17 Sobic.008G123700 expressed protein -
18 Sobic.001G175200 expressed protein -
19 Sobic.002G314100 dimethyladenosine transferase, putative, expressed K14191: 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
20 Sobic.002G025200 - -


Gene co-expression network
sample Sobic001G041900 Sobic001G041900 Sobic009G050600 Sobic009G050600 Sobic001G041900--Sobic009G050600 Sobic006G095100 Sobic006G095100 Sobic001G041900--Sobic006G095100 Sobic004G023600 Sobic004G023600 Sobic001G041900--Sobic004G023600 Sobic004G199500 Sobic004G199500 Sobic001G041900--Sobic004G199500 Sobic001G207301 Sobic001G207301 Sobic001G041900--Sobic001G207301 Sobic004G128100 Sobic004G128100 Sobic001G041900--Sobic004G128100 Sobic001G102200 Sobic001G102200 Sobic001G041900--Sobic001G102200 Sobic007G130500 Sobic007G130500 Sobic001G041900--Sobic007G130500 Sobic009G027200 Sobic009G027200 Sobic001G041900--Sobic009G027200 Sobic009G050600--Sobic001G041900 Sobic010G162200 Sobic010G162200 Sobic009G050600--Sobic010G162200 Sobic001G087800 Sobic001G087800 Sobic009G050600--Sobic001G087800 Sobic006G109200 Sobic006G109200 Sobic009G050600--Sobic006G109200 Sobic009G050600--Sobic006G095100 Sobic004G157700 Sobic004G157700 Sobic009G050600--Sobic004G157700 Sobic003G225300 Sobic003G225300 Sobic009G050600--Sobic003G225300 Sobic001G291400 Sobic001G291400 Sobic009G050600--Sobic001G291400 Sobic009G050600--Sobic004G128100 Sobic009G174150 Sobic009G174150 Sobic006G095100--Sobic009G174150 Sobic004G303433 Sobic004G303433 Sobic006G095100--Sobic004G303433 Sobic003G030500 Sobic003G030500 Sobic006G095100--Sobic003G030500 Sobic009G016666 Sobic009G016666 Sobic006G095100--Sobic009G016666 Sobic001G535850 Sobic001G535850 Sobic006G095100--Sobic001G535850 Sobic010G186900 Sobic010G186900 Sobic006G095100--Sobic010G186900 Sobic005G104900 Sobic005G104900 Sobic006G095100--Sobic005G104900 Sobic009G204501 Sobic009G204501 Sobic006G095100--Sobic009G204501 Sobic001G394532 Sobic001G394532 Sobic006G095100--Sobic001G394532 Sobic001G397550 Sobic001G397550 Sobic004G023600--Sobic001G397550 Sobic004G199100 Sobic004G199100 Sobic004G023600--Sobic004G199100 Sobic006G261650 Sobic006G261650 Sobic004G023600--Sobic006G261650 Sobic003G169700 Sobic003G169700 Sobic004G023600--Sobic003G169700 Sobic003G327950 Sobic003G327950 Sobic004G023600--Sobic003G327950 Sobic007G028300 Sobic007G028300 Sobic004G023600--Sobic007G028300 Sobic002G033550 Sobic002G033550 Sobic004G023600--Sobic002G033550 Sobic004G303900 Sobic004G303900 Sobic004G023600--Sobic004G303900 Sobic003G163000 Sobic003G163000 Sobic004G023600--Sobic003G163000 Sobic008G123700 Sobic008G123700 Sobic004G199500--Sobic008G123700 Sobic009G206900 Sobic009G206900 Sobic004G199500--Sobic009G206900 Sobic008G142450 Sobic008G142450 Sobic004G199500--Sobic008G142450 Sobic001G452800 Sobic001G452800 Sobic004G199500--Sobic001G452800 Sobic006G090450 Sobic006G090450 Sobic004G199500--Sobic006G090450 Sobic004G233100 Sobic004G233100 Sobic004G199500--Sobic004G233100 Sobic001G509901 Sobic001G509901 Sobic004G199500--Sobic001G509901 Sobic001G490350 Sobic001G490350 Sobic004G199500--Sobic001G490350 Sobic002G071201 Sobic002G071201 Sobic004G199500--Sobic002G071201 Sobic001G207301--Sobic003G169700 SobicK031400 SobicK031400 Sobic001G207301--SobicK031400 Sobic006G217400 Sobic006G217400 Sobic001G207301--Sobic006G217400 Sobic004G332200 Sobic004G332200 Sobic001G207301--Sobic004G332200 Sobic006G205800 Sobic006G205800 Sobic001G207301--Sobic006G205800 Sobic001G207301--Sobic006G261650 Sobic001G207301--Sobic003G163000 Sobic001G420150 Sobic001G420150 Sobic001G207301--Sobic001G420150 Sobic004G291300 Sobic004G291300 Sobic001G207301--Sobic004G291300 Sobic010G056100 Sobic010G056100 Sobic004G128100--Sobic010G056100 Sobic004G299300 Sobic004G299300 Sobic004G128100--Sobic004G299300 Sobic009G105500 Sobic009G105500 Sobic004G128100--Sobic009G105500 Sobic003G097000 Sobic003G097000 Sobic004G128100--Sobic003G097000 Sobic004G128100--Sobic004G199500 Sobic004G128100--Sobic009G027200 Sobic004G128100--Sobic001G041900 Sobic003G301400 Sobic003G301400 Sobic004G128100--Sobic003G301400 Sobic003G395600 Sobic003G395600 Sobic004G128100--Sobic003G395600 Sobic001G102200--Sobic007G130500 Sobic006G004200 Sobic006G004200 Sobic001G102200--Sobic006G004200 Sobic001G411500 Sobic001G411500 Sobic001G102200--Sobic001G411500 Sobic010G026850 Sobic010G026850 Sobic001G102200--Sobic010G026850 Sobic005G028500 Sobic005G028500 Sobic001G102200--Sobic005G028500 Sobic006G206600 Sobic006G206600 Sobic001G102200--Sobic006G206600 Sobic003G271100 Sobic003G271100 Sobic001G102200--Sobic003G271100 Sobic005G100500 Sobic005G100500 Sobic001G102200--Sobic005G100500 Sobic002G191900 Sobic002G191900 Sobic001G102200--Sobic002G191900 Sobic007G130500--Sobic001G102200 Sobic007G130500--Sobic006G095100 Sobic007G130500--Sobic001G041900 Sobic007G130500--Sobic003G030500 Sobic007G130500--Sobic005G100500 Sobic007G130500--Sobic006G109200 Sobic007G130500--Sobic001G411500 Sobic001G026400 Sobic001G026400 Sobic007G130500--Sobic001G026400 Sobic003G442800 Sobic003G442800 Sobic007G130500--Sobic003G442800 Sobic009G027200--Sobic006G217400 Sobic007G200700 Sobic007G200700 Sobic009G027200--Sobic007G200700 Sobic003G226600 Sobic003G226600 Sobic009G027200--Sobic003G226600 Sobic008G093300 Sobic008G093300 Sobic009G027200--Sobic008G093300 Sobic004G115100 Sobic004G115100 Sobic009G027200--Sobic004G115100 Sobic006G029850 Sobic006G029850 Sobic009G027200--Sobic006G029850 Sobic009G027200--Sobic001G207301 Sobic006G035350 Sobic006G035350 Sobic009G027200--Sobic006G035350 Sobic008G100201 Sobic008G100201 Sobic009G027200--Sobic008G100201
Octagon: transcription factors


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