Gene annotation
Transcriptome id Sobic.001G102200.1
Synonym Sb01g009120
Functional annotation expressed protein
UniProt C5WLX9
Pfam -
Panther DB PTHR35135 PTHR35135:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G14105 : -
RAP-DB (Rice) LOC_Os05g44160.1 : expressed protein
MaizeGDB (Corn) Zm00025a016875
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G102200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G130500 cation efflux family protein, putative, expressed K14692: SLC30A5_7, ZNT5_7, MTP, solute carrier family 30 (zinc transporter), member 5/7
2 Sobic.006G004200 expressed protein -
3 Sobic.001G411500 expressed protein -
4 Sobic.010G026850 - -
5 Sobic.005G028500 expressed protein -
6 Sobic.006G206600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine phosphatase, putative, expressed -
7 Sobic.003G271100 expressed protein -
8 Sobic.005G100500 RNA polymerase subunit, putative, expressed K03020: RPC19, DNA-directed RNA polymerases I and III subunit RPAC2
9 Sobic.002G191900 OsFBX325 - F-box domain containing protein, expressed -
10 Sobic.001G201933 - -
11 Sobic.004G104200 berberine and berberine like domain containing protein, expressed -
12 Sobic.004G078200 - -
13 Sobic.002G088300 expressed protein -
14 Sobic.007G107800 expressed protein -
15 Sobic.010G002301 - -
16 Sobic.009G255000 tyrosine protein kinase domain containing protein, putative, expressed -
17 Sobic.002G198900 PPR repeat domain containing protein, putative, expressed -
18 Sobic.007G028300 - -
19 Sobic.006G219400 - -
20 Sobic.006G109200 expressed protein -


Gene co-expression network
sample Sobic001G102200 Sobic001G102200 Sobic007G130500 Sobic007G130500 Sobic001G102200--Sobic007G130500 Sobic006G004200 Sobic006G004200 Sobic001G102200--Sobic006G004200 Sobic001G411500 Sobic001G411500 Sobic001G102200--Sobic001G411500 Sobic010G026850 Sobic010G026850 Sobic001G102200--Sobic010G026850 Sobic005G028500 Sobic005G028500 Sobic001G102200--Sobic005G028500 Sobic006G206600 Sobic006G206600 Sobic001G102200--Sobic006G206600 Sobic003G271100 Sobic003G271100 Sobic001G102200--Sobic003G271100 Sobic005G100500 Sobic005G100500 Sobic001G102200--Sobic005G100500 Sobic002G191900 Sobic002G191900 Sobic001G102200--Sobic002G191900 Sobic007G130500--Sobic001G102200 Sobic006G095100 Sobic006G095100 Sobic007G130500--Sobic006G095100 Sobic001G041900 Sobic001G041900 Sobic007G130500--Sobic001G041900 Sobic003G030500 Sobic003G030500 Sobic007G130500--Sobic003G030500 Sobic007G130500--Sobic005G100500 Sobic006G109200 Sobic006G109200 Sobic007G130500--Sobic006G109200 Sobic007G130500--Sobic001G411500 Sobic001G026400 Sobic001G026400 Sobic007G130500--Sobic001G026400 Sobic003G442800 Sobic003G442800 Sobic007G130500--Sobic003G442800 Sobic006G004200--Sobic003G271100 Sobic006G219400 Sobic006G219400 Sobic006G004200--Sobic006G219400 Sobic006G004200--Sobic005G028500 Sobic006G210233 Sobic006G210233 Sobic006G004200--Sobic006G210233 Sobic006G004200--Sobic002G191900 Sobic005G224601 Sobic005G224601 Sobic006G004200--Sobic005G224601 Sobic006G074600 Sobic006G074600 Sobic006G004200--Sobic006G074600 Sobic004G078200 Sobic004G078200 Sobic006G004200--Sobic004G078200 Sobic009G131032 Sobic009G131032 Sobic006G004200--Sobic009G131032 Sobic007G107800 Sobic007G107800 Sobic001G411500--Sobic007G107800 Sobic004G268600 Sobic004G268600 Sobic001G411500--Sobic004G268600 Sobic004G104200 Sobic004G104200 Sobic001G411500--Sobic004G104200 Sobic004G208301 Sobic004G208301 Sobic001G411500--Sobic004G208301 Sobic003G119750 Sobic003G119750 Sobic001G411500--Sobic003G119750 Sobic001G128000 Sobic001G128000 Sobic001G411500--Sobic001G128000 Sobic009G192200 Sobic009G192200 Sobic001G411500--Sobic009G192200 Sobic007G085900 Sobic007G085900 Sobic001G411500--Sobic007G085900 Sobic003G337200 Sobic003G337200 Sobic001G411500--Sobic003G337200 Sobic001G201933 Sobic001G201933 Sobic010G026850--Sobic001G201933 Sobic010G002301 Sobic010G002301 Sobic010G026850--Sobic010G002301 Sobic010G026850--Sobic006G206600 Sobic006G135701 Sobic006G135701 Sobic010G026850--Sobic006G135701 Sobic001G118050 Sobic001G118050 Sobic010G026850--Sobic001G118050 Sobic004G162100 Sobic004G162100 Sobic010G026850--Sobic004G162100 Sobic007G113566 Sobic007G113566 Sobic010G026850--Sobic007G113566 Sobic003G139600 Sobic003G139600 Sobic010G026850--Sobic003G139600 Sobic002G088300 Sobic002G088300 Sobic010G026850--Sobic002G088300 Sobic005G028500--Sobic004G078200 Sobic005G028500--Sobic006G219400 Sobic005G028500--Sobic003G271100 Sobic005G028500--Sobic009G192200 Sobic009G255000 Sobic009G255000 Sobic005G028500--Sobic009G255000 Sobic005G028500--Sobic007G113566 Sobic005G028500--Sobic002G191900 Sobic001G465600 Sobic001G465600 Sobic005G028500--Sobic001G465600 Sobic005G028500--Sobic010G002301 Sobic007G028300 Sobic007G028300 Sobic006G206600--Sobic007G028300 Sobic006G100150 Sobic006G100150 Sobic006G206600--Sobic006G100150 Sobic006G206600--Sobic004G078200 Sobic004G303900 Sobic004G303900 Sobic006G206600--Sobic004G303900 Sobic009G218700 Sobic009G218700 Sobic006G206600--Sobic009G218700 Sobic006G206600--Sobic006G135701 Sobic006G206600--Sobic001G118050 Sobic006G206600--Sobic002G088300 Sobic006G206600--Sobic007G113566 Sobic003G271100--Sobic005G028500 Sobic003G271100--Sobic006G219400 Sobic003G271100--Sobic004G078200 Sobic003G271100--Sobic002G191900 Sobic003G271100--Sobic009G131032 Sobic003G271100--Sobic007G028300 Sobic003G271100--Sobic002G088300 Sobic003G271100--Sobic001G201933 Sobic003G271100--Sobic006G074600 Sobic006G108500 Sobic006G108500 Sobic005G100500--Sobic006G108500 Sobic003G409500 Sobic003G409500 Sobic005G100500--Sobic003G409500 Sobic005G100500--Sobic007G107800 Sobic010G267300 Sobic010G267300 Sobic005G100500--Sobic010G267300 Sobic001G395600 Sobic001G395600 Sobic005G100500--Sobic001G395600 Sobic005G100500--Sobic009G218700 Sobic004G015600 Sobic004G015600 Sobic005G100500--Sobic004G015600 Sobic005G100500--Sobic007G113566 Sobic004G157050 Sobic004G157050 Sobic005G100500--Sobic004G157050 Sobic002G191900--Sobic001G201933 Sobic002G191900--Sobic010G002301 Sobic002G191900--Sobic001G465600 Sobic002G191900--Sobic006G219400 Sobic002G191900--Sobic003G139600 Sobic002G191900--Sobic005G028500 Sobic002G191900--Sobic003G271100 Sobic002G191900--Sobic007G113566 Sobic002G191900--Sobic004G157050
Octagon: transcription factors


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