Gene annotation
Transcriptome id Sobic.001G411500.1
Synonym Sb01g038830, ELP6
Functional annotation expressed protein
UniProt C5WNM9
Pfam PF09807
Panther DB PTHR16184 PTHR16184:SF6
NCBI CDD KOG4723; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G10090 : elongator protein 6
RAP-DB (Rice) LOC_Os03g17560.1 : expressed protein
MaizeGDB (Corn) Zm00025a050242
Brachypodium -
Barley HORVU4Hr1G057580.1
Wheat TraesCS4B02G198800
Populus -


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cDNA sequences
Sobic.001G411500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G107800 expressed protein -
2 Sobic.004G268600 nodulin, putative, expressed -
3 Sobic.004G104200 berberine and berberine like domain containing protein, expressed -
4 Sobic.004G208301 - K15429: TRM5, tRNA (guanine37-N1)-methyltransferase
5 Sobic.003G119750 - -
6 Sobic.001G128000 expressed protein -
7 Sobic.009G192200 outer membrane protein, OMP85 family, putative, expressed -
8 Sobic.007G085900 - -
9 Sobic.003G337200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat-containing protein, putative, expressed -
10 Sobic.001G435900 expressed protein -
11 Sobic.005G100500 RNA polymerase subunit, putative, expressed K03020: RPC19, DNA-directed RNA polymerases I and III subunit RPAC2
12 Sobic.006G143800 - -
13 Sobic.008G024900 expressed protein -
14 Sobic.004G282933 - -
15 Sobic.006G192600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat protein PPR868-14, putative, expressed -
16 Sobic.005G167100 - -
17 Sobic.001G293900 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
18 Sobic.008G140050 - -
19 Sobic.005G028500 expressed protein -
20 Sobic.004G337850 - -


Gene co-expression network
sample Sobic001G411500 Sobic001G411500 Sobic007G107800 Sobic007G107800 Sobic001G411500--Sobic007G107800 Sobic004G268600 Sobic004G268600 Sobic001G411500--Sobic004G268600 Sobic004G104200 Sobic004G104200 Sobic001G411500--Sobic004G104200 Sobic004G208301 Sobic004G208301 Sobic001G411500--Sobic004G208301 Sobic003G119750 Sobic003G119750 Sobic001G411500--Sobic003G119750 Sobic001G128000 Sobic001G128000 Sobic001G411500--Sobic001G128000 Sobic009G192200 Sobic009G192200 Sobic001G411500--Sobic009G192200 Sobic007G085900 Sobic007G085900 Sobic001G411500--Sobic007G085900 Sobic003G337200 Sobic003G337200 Sobic001G411500--Sobic003G337200 Sobic004G157050 Sobic004G157050 Sobic007G107800--Sobic004G157050 Sobic004G207800 Sobic004G207800 Sobic007G107800--Sobic004G207800 Sobic007G107800--Sobic009G192200 Sobic007G113566 Sobic007G113566 Sobic007G107800--Sobic007G113566 Sobic003G290200 Sobic003G290200 Sobic007G107800--Sobic003G290200 Sobic010G002301 Sobic010G002301 Sobic007G107800--Sobic010G002301 Sobic001G332933 Sobic001G332933 Sobic007G107800--Sobic001G332933 Sobic008G171200 Sobic008G171200 Sobic007G107800--Sobic008G171200 Sobic007G107800--Sobic007G085900 Sobic004G268600--Sobic003G337200 Sobic004G268600--Sobic001G128000 Sobic002G180732 Sobic002G180732 Sobic004G268600--Sobic002G180732 Sobic004G234766 Sobic004G234766 Sobic004G268600--Sobic004G234766 Sobic003G160433 Sobic003G160433 Sobic004G268600--Sobic003G160433 Sobic005G163932 Sobic005G163932 Sobic004G268600--Sobic005G163932 Sobic010G107901 Sobic010G107901 Sobic004G268600--Sobic010G107901 Sobic008G024900 Sobic008G024900 Sobic004G268600--Sobic008G024900 Sobic004G268600--Sobic003G119750 Sobic004G282933 Sobic004G282933 Sobic004G104200--Sobic004G282933 Sobic004G104200--Sobic009G192200 Sobic004G104200--Sobic007G085900 Sobic008G140050 Sobic008G140050 Sobic004G104200--Sobic008G140050 Sobic003G160400 Sobic003G160400 Sobic004G104200--Sobic003G160400 Sobic005G167100 Sobic005G167100 Sobic004G104200--Sobic005G167100 Sobic006G057100 Sobic006G057100 Sobic004G104200--Sobic006G057100 Sobic004G104200--Sobic008G024900 Sobic005G028500 Sobic005G028500 Sobic004G104200--Sobic005G028500 Sobic004G208301--Sobic004G268600 Sobic003G160300 Sobic003G160300 Sobic004G208301--Sobic003G160300 Sobic004G208301--Sobic003G160433 Sobic004G208301--Sobic007G085900 Sobic001G054050 Sobic001G054050 Sobic004G208301--Sobic001G054050 Sobic004G208301--Sobic001G128000 Sobic002G390200 Sobic002G390200 Sobic004G208301--Sobic002G390200 Sobic004G208301--Sobic003G337200 Sobic004G208301--Sobic009G192200 Sobic001G293900 Sobic001G293900 Sobic003G119750--Sobic001G293900 Sobic003G344300 Sobic003G344300 Sobic003G119750--Sobic003G344300 Sobic007G004750 Sobic007G004750 Sobic003G119750--Sobic007G004750 Sobic010G132200 Sobic010G132200 Sobic003G119750--Sobic010G132200 Sobic003G168800 Sobic003G168800 Sobic003G119750--Sobic003G168800 Sobic003G423400 Sobic003G423400 Sobic003G119750--Sobic003G423400 Sobic006G192600 Sobic006G192600 Sobic003G119750--Sobic006G192600 Sobic003G119750--Sobic001G128000 Sobic003G169400 Sobic003G169400 Sobic003G119750--Sobic003G169400 Sobic001G128000--Sobic003G160433 Sobic001G128000--Sobic007G085900 Sobic001G128000--Sobic003G160300 Sobic001G128000--Sobic003G160400 Sobic005G216900 Sobic005G216900 Sobic001G128000--Sobic005G216900 Sobic001G128000--Sobic001G054050 Sobic001G128000--Sobic002G390200 Sobic010G267300 Sobic010G267300 Sobic001G128000--Sobic010G267300 Sobic001G128000--Sobic008G140050 Sobic009G192200--Sobic007G085900 Sobic009G192200--Sobic006G057100 Sobic009G192200--Sobic003G160300 Sobic009G192200--Sobic004G282933 Sobic009G192200--Sobic008G140050 Sobic003G218950 Sobic003G218950 Sobic009G192200--Sobic003G218950 Sobic009G192200--Sobic003G160433 Sobic006G131700 Sobic006G131700 Sobic009G192200--Sobic006G131700 Sobic003G352000 Sobic003G352000 Sobic009G192200--Sobic003G352000 Sobic007G085900--Sobic003G160300 Sobic007G085900--Sobic003G160433 Sobic007G085900--Sobic009G192200 Sobic007G085900--Sobic003G160400 Sobic007G085900--Sobic008G140050 Sobic007G085900--Sobic006G057100 Sobic007G085900--Sobic001G128000 Sobic007G085900--Sobic002G390200 Sobic007G085900--Sobic001G054050 Sobic003G337200--Sobic004G234766 Sobic003G337200--Sobic010G107901 Sobic003G337200--Sobic004G268600 Sobic002G397700 Sobic002G397700 Sobic003G337200--Sobic002G397700 Sobic006G093550 Sobic006G093550 Sobic003G337200--Sobic006G093550 Sobic002G322101 Sobic002G322101 Sobic003G337200--Sobic002G322101 Sobic003G172450 Sobic003G172450 Sobic003G337200--Sobic003G172450 Sobic003G255850 Sobic003G255850 Sobic003G337200--Sobic003G255850 Sobic007G149750 Sobic007G149750 Sobic003G337200--Sobic007G149750
Octagon: transcription factors


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