Gene annotation
Transcriptome id Sobic.001G435900.1
Synonym Sb01g041010
Functional annotation expressed protein
UniProt C5WQX1
Pfam -
Panther DB PTHR33828 PTHR33828:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G19990 : -
RAP-DB (Rice) LOC_Os03g14580.1 : expressed protein
MaizeGDB (Corn) Zm00025a052874
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G119750 - -
2 Sobic.001G293900 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
3 Sobic.003G168800 photosystem II reaction center protein H, putative, expressed K02709: photosystem II PsbH protein
4 Sobic.010G132200 inhibitor I family protein, putative, expressed -
5 Sobic.004G268600 nodulin, putative, expressed -
6 Sobic.003G423400 OsFBX191 - F-box domain containing protein, expressed -
7 Sobic.003G344300 - -
8 Sobic.002G218400 DUF1645 domain containing protein, putative, expressed -
9 Sobic.001G128000 expressed protein -
10 Sobic.001G182900 - -
11 Sobic.007G004750 - -
12 Sobic.006G192600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat protein PPR868-14, putative, expressed -
13 Sobic.003G354166 - -
14 Sobic.003G172850 - K03043: DNA-directed RNA polymerase subunit beta
15 Sobic.010G185250 - -
16 Sobic.001G054050 - -
17 Sobic.010G107601 - -
18 Sobic.003G337200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat-containing protein, putative, expressed -
19 Sobic.010G035600 - -
20 Sobic.003G169400 DNA-directed RNA polymerase subunit beta, putative, expressed K03046: DNA-directed RNA polymerase subunit beta'


Gene co-expression network
sample Sobic001G435900 Sobic001G435900 Sobic003G119750 Sobic003G119750 Sobic001G435900--Sobic003G119750 Sobic001G293900 Sobic001G293900 Sobic001G435900--Sobic001G293900 Sobic003G168800 Sobic003G168800 Sobic001G435900--Sobic003G168800 Sobic010G132200 Sobic010G132200 Sobic001G435900--Sobic010G132200 Sobic004G268600 Sobic004G268600 Sobic001G435900--Sobic004G268600 Sobic003G423400 Sobic003G423400 Sobic001G435900--Sobic003G423400 Sobic003G344300 Sobic003G344300 Sobic001G435900--Sobic003G344300 Sobic002G218400 Sobic002G218400 Sobic001G435900--Sobic002G218400 Sobic001G128000 Sobic001G128000 Sobic001G435900--Sobic001G128000 Sobic003G119750--Sobic001G293900 Sobic003G119750--Sobic003G344300 Sobic007G004750 Sobic007G004750 Sobic003G119750--Sobic007G004750 Sobic003G119750--Sobic010G132200 Sobic003G119750--Sobic003G168800 Sobic003G119750--Sobic003G423400 Sobic006G192600 Sobic006G192600 Sobic003G119750--Sobic006G192600 Sobic003G119750--Sobic001G128000 Sobic003G169400 Sobic003G169400 Sobic003G119750--Sobic003G169400 Sobic001G293900--Sobic003G119750 Sobic001G293900--Sobic010G132200 Sobic001G293900--Sobic003G169400 Sobic001G293900--Sobic003G168800 Sobic003G172850 Sobic003G172850 Sobic001G293900--Sobic003G172850 Sobic001G293900--Sobic003G423400 Sobic006G124850 Sobic006G124850 Sobic001G293900--Sobic006G124850 Sobic001G293900--Sobic006G192600 Sobic003G168500 Sobic003G168500 Sobic001G293900--Sobic003G168500 Sobic003G168800--Sobic003G172850 Sobic010G052866 Sobic010G052866 Sobic003G168800--Sobic010G052866 Sobic003G168800--Sobic003G344300 Sobic003G168800--Sobic006G192600 Sobic003G168800--Sobic001G293900 Sobic003G168800--Sobic010G132200 Sobic004G251400 Sobic004G251400 Sobic003G168800--Sobic004G251400 Sobic003G173266 Sobic003G173266 Sobic003G168800--Sobic003G173266 Sobic003G168800--Sobic003G168500 Sobic010G132200--Sobic001G293900 Sobic010G132200--Sobic003G169400 Sobic010G107601 Sobic010G107601 Sobic010G132200--Sobic010G107601 Sobic010G132200--Sobic003G168500 Sobic010G132200--Sobic003G172850 Sobic010G132200--Sobic003G423400 Sobic010G132200--Sobic003G168800 Sobic003G171900 Sobic003G171900 Sobic010G132200--Sobic003G171900 Sobic003G172400 Sobic003G172400 Sobic010G132200--Sobic003G172400 Sobic003G337200 Sobic003G337200 Sobic004G268600--Sobic003G337200 Sobic004G268600--Sobic001G128000 Sobic002G180732 Sobic002G180732 Sobic004G268600--Sobic002G180732 Sobic004G234766 Sobic004G234766 Sobic004G268600--Sobic004G234766 Sobic003G160433 Sobic003G160433 Sobic004G268600--Sobic003G160433 Sobic005G163932 Sobic005G163932 Sobic004G268600--Sobic005G163932 Sobic010G107901 Sobic010G107901 Sobic004G268600--Sobic010G107901 Sobic008G024900 Sobic008G024900 Sobic004G268600--Sobic008G024900 Sobic004G268600--Sobic003G119750 Sobic003G423400--Sobic010G132200 Sobic003G423400--Sobic001G293900 Sobic003G423400--Sobic003G169400 Sobic003G423400--Sobic006G192600 Sobic003G423400--Sobic010G107601 Sobic003G423400--Sobic003G168500 Sobic003G423400--Sobic003G172850 Sobic005G167100 Sobic005G167100 Sobic003G423400--Sobic005G167100 Sobic003G423400--Sobic003G168800 Sobic003G344300--Sobic003G168800 Sobic002G165200 Sobic002G165200 Sobic003G344300--Sobic002G165200 Sobic004G019550 Sobic004G019550 Sobic003G344300--Sobic004G019550 Sobic010G035600 Sobic010G035600 Sobic003G344300--Sobic010G035600 Sobic003G344300--Sobic003G119750 Sobic001G154000 Sobic001G154000 Sobic003G344300--Sobic001G154000 Sobic010G185250 Sobic010G185250 Sobic003G344300--Sobic010G185250 Sobic003G344300--Sobic001G293900 Sobic003G344300--Sobic006G192600 Sobic002G387450 Sobic002G387450 Sobic002G218400--Sobic002G387450 Sobic006G122000 Sobic006G122000 Sobic002G218400--Sobic006G122000 Sobic002G218400--Sobic005G163932 Sobic003G354166 Sobic003G354166 Sobic002G218400--Sobic003G354166 Sobic002G218400--Sobic003G119750 Sobic004G322650 Sobic004G322650 Sobic002G218400--Sobic004G322650 Sobic002G218400--Sobic003G344300 Sobic002G218400--Sobic001G435900 Sobic004G015600 Sobic004G015600 Sobic002G218400--Sobic004G015600 Sobic001G128000--Sobic003G160433 Sobic007G085900 Sobic007G085900 Sobic001G128000--Sobic007G085900 Sobic003G160300 Sobic003G160300 Sobic001G128000--Sobic003G160300 Sobic003G160400 Sobic003G160400 Sobic001G128000--Sobic003G160400 Sobic005G216900 Sobic005G216900 Sobic001G128000--Sobic005G216900 Sobic001G054050 Sobic001G054050 Sobic001G128000--Sobic001G054050 Sobic002G390200 Sobic002G390200 Sobic001G128000--Sobic002G390200 Sobic010G267300 Sobic010G267300 Sobic001G128000--Sobic010G267300 Sobic008G140050 Sobic008G140050 Sobic001G128000--Sobic008G140050
Octagon: transcription factors


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