Gene annotation
Transcriptome id Sobic.004G208301.1
Synonym -
Functional annotation -
UniProt A0A194YQX3 , C5XX79
Pfam PF02005
Panther DB PTHR23245 PTHR23245:SF36
NCBI CDD KOG2078; tRNA modification enzyme
KEGG Orthology K15429; TRM5, tRNA (guanine37-N1)-methyltransferase
Gene Ontology GO:0008033; tRNA processing GO:0004809tRNA (guanine-N2-)-methyltransferase activity GO:0003723RNA binding


Orthologs (automatic annotation)
TAIR AT3G56120 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os02g39370.1 : tRNA methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a031876
Brachypodium KQK00245
Barley HORVU5Hr1G036670.5 , HORVU5Hr1G036670.6 , HORVU7Hr1G055850.1 , HORVU7Hr1G055850.2 , HORVU6Hr1G055290.19 , HORVU6Hr1G055290.18 , HORVU6Hr1G055290.17 , HORVU6Hr1G055290.16 , HORVU6Hr1G055290.15 , HORVU6Hr1G055290.14 , HORVU6Hr1G055290.13 , HORVU6Hr1G055290.12 , HORVU6Hr1G055290.11 , HORVU6Hr1G055290.10 , HORVU6Hr1G055290.20 , HORVU4Hr1G057690.1 , HORVU6Hr1G055290.7 , HORVU6Hr1G055290.6 , HORVU6Hr1G055290.5 , HORVU6Hr1G055290.4 , HORVU6Hr1G055290.3 , HORVU6Hr1G055290.2 , HORVU6Hr1G055290.1 , HORVU6Hr1G055290.9 , HORVU6Hr1G055290.8
Wheat TraesCS6D02G199000 , TraesCS6A02G216600 , TraesCS6A02G216600 , TraesCS6B02G246300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G268600 nodulin, putative, expressed -
2 Sobic.003G160300 - -
3 Sobic.003G160433 - -
4 Sobic.007G085900 - -
5 Sobic.001G054050 - -
6 Sobic.001G128000 expressed protein -
7 Sobic.002G390200 pentatricopeptide, putative, expressed -
8 Sobic.003G337200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat-containing protein, putative, expressed -
9 Sobic.009G192200 outer membrane protein, OMP85 family, putative, expressed -
10 Sobic.002G180732 - -
11 Sobic.008G140050 - -
12 Sobic.005G216900 DUF538 domain containing protein, putative, expressed -
13 Sobic.005G167100 - -
14 Sobic.010G267300 thaumatin, putative, expressed -
15 Sobic.008G024900 expressed protein -
16 Sobic.003G160400 zinc knuckle family protein, expressed -
17 Sobic.K029400 conserved hypothetical protein -
18 Sobic.010G107601 - -
19 Sobic.005G116400 apocytochrome f precursor, putative, expressed K02634: apocytochrome f
20 Sobic.001G435900 expressed protein -


Gene co-expression network
sample Sobic004G208301 Sobic004G208301 Sobic004G268600 Sobic004G268600 Sobic004G208301--Sobic004G268600 Sobic003G160300 Sobic003G160300 Sobic004G208301--Sobic003G160300 Sobic003G160433 Sobic003G160433 Sobic004G208301--Sobic003G160433 Sobic007G085900 Sobic007G085900 Sobic004G208301--Sobic007G085900 Sobic001G054050 Sobic001G054050 Sobic004G208301--Sobic001G054050 Sobic001G128000 Sobic001G128000 Sobic004G208301--Sobic001G128000 Sobic002G390200 Sobic002G390200 Sobic004G208301--Sobic002G390200 Sobic003G337200 Sobic003G337200 Sobic004G208301--Sobic003G337200 Sobic009G192200 Sobic009G192200 Sobic004G208301--Sobic009G192200 Sobic004G268600--Sobic003G337200 Sobic004G268600--Sobic001G128000 Sobic002G180732 Sobic002G180732 Sobic004G268600--Sobic002G180732 Sobic004G234766 Sobic004G234766 Sobic004G268600--Sobic004G234766 Sobic004G268600--Sobic003G160433 Sobic005G163932 Sobic005G163932 Sobic004G268600--Sobic005G163932 Sobic010G107901 Sobic010G107901 Sobic004G268600--Sobic010G107901 Sobic008G024900 Sobic008G024900 Sobic004G268600--Sobic008G024900 Sobic003G119750 Sobic003G119750 Sobic004G268600--Sobic003G119750 Sobic003G160300--Sobic003G160433 Sobic003G160300--Sobic002G390200 Sobic003G160300--Sobic007G085900 Sobic003G160400 Sobic003G160400 Sobic003G160300--Sobic003G160400 Sobic008G140050 Sobic008G140050 Sobic003G160300--Sobic008G140050 Sobic005G216900 Sobic005G216900 Sobic003G160300--Sobic005G216900 Sobic003G160300--Sobic001G128000 Sobic003G160300--Sobic002G180732 Sobic003G160300--Sobic001G054050 Sobic003G160433--Sobic003G160300 Sobic003G160433--Sobic002G390200 Sobic003G160433--Sobic007G085900 Sobic003G160433--Sobic001G128000 Sobic003G160433--Sobic005G216900 Sobic003G160433--Sobic002G180732 Sobic003G160433--Sobic003G160400 Sobic003G160433--Sobic001G054050 Sobic003G160433--Sobic008G140050 Sobic007G085900--Sobic003G160300 Sobic007G085900--Sobic003G160433 Sobic007G085900--Sobic009G192200 Sobic007G085900--Sobic003G160400 Sobic007G085900--Sobic008G140050 Sobic006G057100 Sobic006G057100 Sobic007G085900--Sobic006G057100 Sobic007G085900--Sobic001G128000 Sobic007G085900--Sobic002G390200 Sobic007G085900--Sobic001G054050 Sobic001G054050--Sobic007G085900 Sobic001G054050--Sobic003G160400 Sobic001G054050--Sobic003G160300 Sobic003G113100 Sobic003G113100 Sobic001G054050--Sobic003G113100 Sobic001G054050--Sobic008G140050 Sobic001G054050--Sobic003G160433 Sobic001G054050--Sobic005G216900 Sobic005G167100 Sobic005G167100 Sobic001G054050--Sobic005G167100 Sobic001G054050--Sobic001G128000 Sobic001G128000--Sobic003G160433 Sobic001G128000--Sobic007G085900 Sobic001G128000--Sobic003G160300 Sobic001G128000--Sobic003G160400 Sobic001G128000--Sobic005G216900 Sobic001G128000--Sobic001G054050 Sobic001G128000--Sobic002G390200 Sobic010G267300 Sobic010G267300 Sobic001G128000--Sobic010G267300 Sobic001G128000--Sobic008G140050 Sobic002G390200--Sobic003G160300 Sobic002G390200--Sobic003G160433 Sobic002G390200--Sobic002G180732 Sobic002G390200--Sobic007G085900 Sobic002G390200--Sobic003G160400 Sobic006G139200 Sobic006G139200 Sobic002G390200--Sobic006G139200 Sobic002G390200--Sobic008G140050 Sobic002G040550 Sobic002G040550 Sobic002G390200--Sobic002G040550 Sobic003G172450 Sobic003G172450 Sobic002G390200--Sobic003G172450 Sobic003G337200--Sobic004G234766 Sobic003G337200--Sobic010G107901 Sobic003G337200--Sobic004G268600 Sobic002G397700 Sobic002G397700 Sobic003G337200--Sobic002G397700 Sobic006G093550 Sobic006G093550 Sobic003G337200--Sobic006G093550 Sobic002G322101 Sobic002G322101 Sobic003G337200--Sobic002G322101 Sobic003G337200--Sobic003G172450 Sobic003G255850 Sobic003G255850 Sobic003G337200--Sobic003G255850 Sobic007G149750 Sobic007G149750 Sobic003G337200--Sobic007G149750 Sobic009G192200--Sobic007G085900 Sobic009G192200--Sobic006G057100 Sobic009G192200--Sobic003G160300 Sobic004G282933 Sobic004G282933 Sobic009G192200--Sobic004G282933 Sobic009G192200--Sobic008G140050 Sobic003G218950 Sobic003G218950 Sobic009G192200--Sobic003G218950 Sobic009G192200--Sobic003G160433 Sobic006G131700 Sobic006G131700 Sobic009G192200--Sobic006G131700 Sobic003G352000 Sobic003G352000 Sobic009G192200--Sobic003G352000
Octagon: transcription factors


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