Gene annotation
Transcriptome id Sobic.007G130500.1
Synonym Sb07g020630
Functional annotation cation efflux family protein, putative, expressed
UniProt C5YL05
Pfam PF01545
Panther DB PTHR11562 PTHR11562:SF13
NCBI CDD KOG1484; Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily)
KEGG Orthology K14692; SLC30A5_7, ZNT5_7, MTP, solute carrier family 30 (zinc transporter), member 5/7
Gene Ontology GO:0016021; integral component of membrane GO:0008324cation transmembrane transporter activity GO:0006812cation transport


Orthologs (automatic annotation)
TAIR AT2G04620 : Cation efflux family protein
RAP-DB (Rice) LOC_Os05g03780.1 : cation efflux family protein, putative, expressed
MaizeGDB (Corn) Zm00025a006011 , Zm00025a031065
Brachypodium -
Barley HORVU2Hr1G025050.2 , HORVU2Hr1G025050.3 , HORVU2Hr1G025050.1 , HORVU2Hr1G025050.6 , HORVU2Hr1G025050.7 , HORVU2Hr1G025050.4 , HORVU2Hr1G025050.5
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G102200 expressed protein -
2 Sobic.006G095100 ORG4, putative, expressed -
3 Sobic.001G041900 phospholipase, patatin family, putative, expressed K14674: TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase
4 Sobic.003G030500 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
5 Sobic.005G100500 RNA polymerase subunit, putative, expressed K03020: RPC19, DNA-directed RNA polymerases I and III subunit RPAC2
6 Sobic.006G109200 expressed protein -
7 Sobic.001G411500 expressed protein -
8 Sobic.001G026400 expressed protein K15446: TRM13, tRNA:m4X modification enzyme
9 Sobic.003G442800 PPR repeat containing protein, expressed -
10 Sobic.006G108500 dynein light chain type 1 domain containing protein, expressed -
11 Sobic.008G033800 ABCG protein(PubMedID : 21265893)@pleiotropic drug resistance protein 15, putative, expressed -
12 Sobic.007G194200 expressed protein -
13 Sobic.003G124000 DNA methyltransferase protein, putative, expressed -
14 Sobic.003G368200 expressed protein -
15 Sobic.004G208301 - K15429: TRM5, tRNA (guanine37-N1)-methyltransferase
16 Sobic.001G408500 alpha-taxilin, putative, expressed -
17 Sobic.009G218700 pentatricopeptide, putative, expressed -
18 Sobic.002G139700 tubulin binding cofactor C, putative, expressed -
19 Sobic.006G206600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine phosphatase, putative, expressed -
20 Sobic.003G226600 WRKY12, expressed -


Gene co-expression network
sample Sobic007G130500 Sobic007G130500 Sobic001G102200 Sobic001G102200 Sobic007G130500--Sobic001G102200 Sobic006G095100 Sobic006G095100 Sobic007G130500--Sobic006G095100 Sobic001G041900 Sobic001G041900 Sobic007G130500--Sobic001G041900 Sobic003G030500 Sobic003G030500 Sobic007G130500--Sobic003G030500 Sobic005G100500 Sobic005G100500 Sobic007G130500--Sobic005G100500 Sobic006G109200 Sobic006G109200 Sobic007G130500--Sobic006G109200 Sobic001G411500 Sobic001G411500 Sobic007G130500--Sobic001G411500 Sobic001G026400 Sobic001G026400 Sobic007G130500--Sobic001G026400 Sobic003G442800 Sobic003G442800 Sobic007G130500--Sobic003G442800 Sobic001G102200--Sobic007G130500 Sobic006G004200 Sobic006G004200 Sobic001G102200--Sobic006G004200 Sobic001G102200--Sobic001G411500 Sobic010G026850 Sobic010G026850 Sobic001G102200--Sobic010G026850 Sobic005G028500 Sobic005G028500 Sobic001G102200--Sobic005G028500 Sobic006G206600 Sobic006G206600 Sobic001G102200--Sobic006G206600 Sobic003G271100 Sobic003G271100 Sobic001G102200--Sobic003G271100 Sobic001G102200--Sobic005G100500 Sobic002G191900 Sobic002G191900 Sobic001G102200--Sobic002G191900 Sobic009G174150 Sobic009G174150 Sobic006G095100--Sobic009G174150 Sobic004G303433 Sobic004G303433 Sobic006G095100--Sobic004G303433 Sobic006G095100--Sobic003G030500 Sobic009G016666 Sobic009G016666 Sobic006G095100--Sobic009G016666 Sobic001G535850 Sobic001G535850 Sobic006G095100--Sobic001G535850 Sobic010G186900 Sobic010G186900 Sobic006G095100--Sobic010G186900 Sobic005G104900 Sobic005G104900 Sobic006G095100--Sobic005G104900 Sobic009G204501 Sobic009G204501 Sobic006G095100--Sobic009G204501 Sobic001G394532 Sobic001G394532 Sobic006G095100--Sobic001G394532 Sobic009G050600 Sobic009G050600 Sobic001G041900--Sobic009G050600 Sobic001G041900--Sobic006G095100 Sobic004G023600 Sobic004G023600 Sobic001G041900--Sobic004G023600 Sobic004G199500 Sobic004G199500 Sobic001G041900--Sobic004G199500 Sobic001G207301 Sobic001G207301 Sobic001G041900--Sobic001G207301 Sobic004G128100 Sobic004G128100 Sobic001G041900--Sobic004G128100 Sobic001G041900--Sobic001G102200 Sobic001G041900--Sobic007G130500 Sobic009G027200 Sobic009G027200 Sobic001G041900--Sobic009G027200 Sobic007G102600 Sobic007G102600 Sobic003G030500--Sobic007G102600 Sobic003G030500--Sobic006G095100 Sobic003G124000 Sobic003G124000 Sobic003G030500--Sobic003G124000 Sobic001G092250 Sobic001G092250 Sobic003G030500--Sobic001G092250 Sobic005G086250 Sobic005G086250 Sobic003G030500--Sobic005G086250 Sobic004G246000 Sobic004G246000 Sobic003G030500--Sobic004G246000 Sobic005G194400 Sobic005G194400 Sobic003G030500--Sobic005G194400 Sobic007G134300 Sobic007G134300 Sobic003G030500--Sobic007G134300 Sobic002G224800 Sobic002G224800 Sobic003G030500--Sobic002G224800 Sobic006G108500 Sobic006G108500 Sobic005G100500--Sobic006G108500 Sobic003G409500 Sobic003G409500 Sobic005G100500--Sobic003G409500 Sobic007G107800 Sobic007G107800 Sobic005G100500--Sobic007G107800 Sobic010G267300 Sobic010G267300 Sobic005G100500--Sobic010G267300 Sobic001G395600 Sobic001G395600 Sobic005G100500--Sobic001G395600 Sobic009G218700 Sobic009G218700 Sobic005G100500--Sobic009G218700 Sobic004G015600 Sobic004G015600 Sobic005G100500--Sobic004G015600 Sobic007G113566 Sobic007G113566 Sobic005G100500--Sobic007G113566 Sobic004G157050 Sobic004G157050 Sobic005G100500--Sobic004G157050 Sobic006G109200--Sobic001G102200 Sobic006G109200--Sobic006G095100 Sobic007G194200 Sobic007G194200 Sobic006G109200--Sobic007G194200 Sobic006G109200--Sobic007G130500 Sobic006G109200--Sobic003G124000 Sobic001G408500 Sobic001G408500 Sobic006G109200--Sobic001G408500 Sobic006G109200--Sobic001G041900 Sobic006G141100 Sobic006G141100 Sobic006G109200--Sobic006G141100 Sobic009G102200 Sobic009G102200 Sobic006G109200--Sobic009G102200 Sobic001G411500--Sobic007G107800 Sobic004G268600 Sobic004G268600 Sobic001G411500--Sobic004G268600 Sobic004G104200 Sobic004G104200 Sobic001G411500--Sobic004G104200 Sobic004G208301 Sobic004G208301 Sobic001G411500--Sobic004G208301 Sobic003G119750 Sobic003G119750 Sobic001G411500--Sobic003G119750 Sobic001G128000 Sobic001G128000 Sobic001G411500--Sobic001G128000 Sobic009G192200 Sobic009G192200 Sobic001G411500--Sobic009G192200 Sobic007G085900 Sobic007G085900 Sobic001G411500--Sobic007G085900 Sobic003G337200 Sobic003G337200 Sobic001G411500--Sobic003G337200 Sobic001G026400--Sobic005G100500 Sobic003G398500 Sobic003G398500 Sobic001G026400--Sobic003G398500 Sobic004G208800 Sobic004G208800 Sobic001G026400--Sobic004G208800 Sobic001G026400--Sobic001G102200 Sobic010G224100 Sobic010G224100 Sobic001G026400--Sobic010G224100 Sobic006G094800 Sobic006G094800 Sobic001G026400--Sobic006G094800 Sobic002G198900 Sobic002G198900 Sobic001G026400--Sobic002G198900 Sobic001G026400--Sobic006G108500 Sobic004G053100 Sobic004G053100 Sobic001G026400--Sobic004G053100 Sobic003G442800--Sobic001G411500 Sobic001G016300 Sobic001G016300 Sobic003G442800--Sobic001G016300 Sobic007G118400 Sobic007G118400 Sobic003G442800--Sobic007G118400 Sobic005G030600 Sobic005G030600 Sobic003G442800--Sobic005G030600 Sobic003G442800--Sobic007G194200 Sobic003G055400 Sobic003G055400 Sobic003G442800--Sobic003G055400 Sobic001G450400 Sobic001G450400 Sobic003G442800--Sobic001G450400 Sobic003G442800--Sobic005G100500 Sobic003G442800--Sobic001G102200
Octagon: transcription factors


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