Gene annotation
Transcriptome id Sobic.010G056100.1
Synonym Sb10g004890
Functional annotation HIRAN domain containing protein, putative, expressed
UniProt A0A194YHI9
Pfam PF08797 PF08774
Panther DB PTHR15749 PTHR15749:SF4
NCBI CDD -
KEGG Orthology K15363; FAN1, fanconi-associated nuclease 1
Gene Ontology GO:0016818; hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides GO:0008270zinc ion binding GO:0003676nucleic acid binding GO:0016788hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT1G48360 : zinc ion binding;nucleic acid binding;hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides
RAP-DB (Rice) LOC_Os06g07490.1 : HIRAN domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a049872
Brachypodium KQK24198 , PNT76429 , PNT76426 , KQK19406 , PNT76432 , PNT76433 , PNT76430 , PNT76431 , PNT76434
Barley HORVU7Hr1G027580.22 , HORVU7Hr1G027580.23 , HORVU7Hr1G027580.20 , HORVU7Hr1G027580.21 , HORVU7Hr1G027580.24 , HORVU7Hr1G027580.25 , HORVU7Hr1G027580.3 , HORVU7Hr1G027580.7 , HORVU7Hr1G027580.6 , HORVU7Hr1G027580.5 , HORVU7Hr1G027580.4 , HORVU7Hr1G027580.9 , HORVU7Hr1G027580.8 , HORVU7Hr1G027580.13 , HORVU7Hr1G027580.12 , HORVU7Hr1G027580.11 , HORVU7Hr1G027580.10 , HORVU7Hr1G027580.17 , HORVU7Hr1G027580.16 , HORVU7Hr1G027580.15 , HORVU7Hr1G027580.14 , HORVU7Hr1G027580.19 , HORVU7Hr1G027580.18
Wheat TraesCS7D02G132100 , TraesCS7D02G132100 , TraesCS7D02G132100 , TraesCS7A02G132600 , TraesCS7A02G132600 , TraesCS7B02G033200 , TraesCS7B02G033200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G128100 ATP-binding cassette sub-family E member 1, putative, expressed K06174: ABCE1, ATP-binding cassette, sub-family E, member 1
2 Sobic.010G066200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@multidrug resistance-associated protein 11, putative, expressed K05674: ATP-binding cassette, subfamily C (CFTR/MRP), member 10
3 Sobic.003G301400 DNA-directed polymerase, putative, expressed K03509: DNA polymerase eta
4 Sobic.006G141100 OsFBO6 - F-box and other domain containing protein, expressed -
5 Sobic.002G284600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSAUR39 - Auxin-responsive SAUR gene family member, expressed -
6 Sobic.010G063433 - -
7 Sobic.003G077600 WD domain, G-beta repeat domain containing protein, expressed K10140: DNA damage-binding protein 2
8 Sobic.003G395600 CorA-like magnesium transporter protein, putative, expressed K16075: MRS2, magnesium transporter
9 Sobic.001G192900 DNA excision repair protein ERCC-1, putative, expressed K10849: DNA excision repair protein ERCC-1
10 Sobic.002G139700 tubulin binding cofactor C, putative, expressed -
11 Sobic.008G182500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@thaumatin, putative, expressed -
12 Sobic.009G237350 - -
13 Sobic.007G177700 - -
14 Sobic.003G124000 DNA methyltransferase protein, putative, expressed -
15 Sobic.008G061500 receptor kinase, putative, expressed -
16 Sobic.005G203400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NBS-LRR type disease resistance protein, putative, expressed -
17 Sobic.006G157400 syntaxin-18, putative, expressed K08492: syntaxin 18
18 Sobic.003G260000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
19 Sobic.003G311250 - -
20 Sobic.005G005000 cysteine-rich receptor-like protein kinase 4 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1


Gene co-expression network
sample Sobic010G056100 Sobic010G056100 Sobic004G128100 Sobic004G128100 Sobic010G056100--Sobic004G128100 Sobic010G066200 Sobic010G066200 Sobic010G056100--Sobic010G066200 Sobic003G301400 Sobic003G301400 Sobic010G056100--Sobic003G301400 Sobic006G141100 Sobic006G141100 Sobic010G056100--Sobic006G141100 Sobic002G284600 Sobic002G284600 Sobic010G056100--Sobic002G284600 Sobic010G063433 Sobic010G063433 Sobic010G056100--Sobic010G063433 Sobic003G077600 Sobic003G077600 Sobic010G056100--Sobic003G077600 Sobic003G395600 Sobic003G395600 Sobic010G056100--Sobic003G395600 Sobic001G192900 Sobic001G192900 Sobic010G056100--Sobic001G192900 Sobic004G128100--Sobic010G056100 Sobic004G299300 Sobic004G299300 Sobic004G128100--Sobic004G299300 Sobic009G105500 Sobic009G105500 Sobic004G128100--Sobic009G105500 Sobic003G097000 Sobic003G097000 Sobic004G128100--Sobic003G097000 Sobic004G199500 Sobic004G199500 Sobic004G128100--Sobic004G199500 Sobic009G027200 Sobic009G027200 Sobic004G128100--Sobic009G027200 Sobic001G041900 Sobic001G041900 Sobic004G128100--Sobic001G041900 Sobic004G128100--Sobic003G301400 Sobic004G128100--Sobic003G395600 Sobic010G066200--Sobic010G056100 Sobic005G133200 Sobic005G133200 Sobic010G066200--Sobic005G133200 Sobic010G066200--Sobic004G128100 Sobic010G066200--Sobic003G301400 Sobic001G491800 Sobic001G491800 Sobic010G066200--Sobic001G491800 Sobic010G051200 Sobic010G051200 Sobic010G066200--Sobic010G051200 Sobic006G111800 Sobic006G111800 Sobic010G066200--Sobic006G111800 Sobic006G138600 Sobic006G138600 Sobic010G066200--Sobic006G138600 Sobic002G139700 Sobic002G139700 Sobic010G066200--Sobic002G139700 Sobic003G301400--Sobic003G395600 Sobic003G301400--Sobic010G056100 Sobic010G195100 Sobic010G195100 Sobic003G301400--Sobic010G195100 Sobic003G301400--Sobic002G284600 Sobic009G184900 Sobic009G184900 Sobic003G301400--Sobic009G184900 Sobic007G177700 Sobic007G177700 Sobic003G301400--Sobic007G177700 Sobic003G301400--Sobic004G128100 Sobic003G292500 Sobic003G292500 Sobic003G301400--Sobic003G292500 Sobic001G215700 Sobic001G215700 Sobic003G301400--Sobic001G215700 Sobic004G112800 Sobic004G112800 Sobic006G141100--Sobic004G112800 Sobic007G005200 Sobic007G005200 Sobic006G141100--Sobic007G005200 Sobic006G141100--Sobic002G139700 Sobic006G141100--Sobic010G056100 Sobic006G141100--Sobic010G063433 Sobic001G028600 Sobic001G028600 Sobic006G141100--Sobic001G028600 Sobic009G051500 Sobic009G051500 Sobic006G141100--Sobic009G051500 Sobic006G213200 Sobic006G213200 Sobic006G141100--Sobic006G213200 Sobic007G113101 Sobic007G113101 Sobic006G141100--Sobic007G113101 Sobic009G237350 Sobic009G237350 Sobic002G284600--Sobic009G237350 Sobic008G178300 Sobic008G178300 Sobic002G284600--Sobic008G178300 Sobic008G178200 Sobic008G178200 Sobic002G284600--Sobic008G178200 Sobic002G284600--Sobic003G395600 Sobic002G054901 Sobic002G054901 Sobic002G284600--Sobic002G054901 Sobic003G009501 Sobic003G009501 Sobic002G284600--Sobic003G009501 Sobic004G087200 Sobic004G087200 Sobic002G284600--Sobic004G087200 Sobic003G311250 Sobic003G311250 Sobic002G284600--Sobic003G311250 Sobic010G222600 Sobic010G222600 Sobic002G284600--Sobic010G222600 Sobic010G063433--Sobic001G028600 Sobic001G128800 Sobic001G128800 Sobic010G063433--Sobic001G128800 Sobic010G104200 Sobic010G104200 Sobic010G063433--Sobic010G104200 Sobic006G055100 Sobic006G055100 Sobic010G063433--Sobic006G055100 Sobic002G007250 Sobic002G007250 Sobic010G063433--Sobic002G007250 Sobic010G063433--Sobic003G311250 Sobic008G061500 Sobic008G061500 Sobic010G063433--Sobic008G061500 Sobic001G287301 Sobic001G287301 Sobic010G063433--Sobic001G287301 Sobic008G042250 Sobic008G042250 Sobic010G063433--Sobic008G042250 Sobic003G077600--Sobic006G141100 Sobic003G077600--Sobic010G056100 Sobic009G038600 Sobic009G038600 Sobic003G077600--Sobic009G038600 Sobic001G167800 Sobic001G167800 Sobic003G077600--Sobic001G167800 Sobic004G046001 Sobic004G046001 Sobic003G077600--Sobic004G046001 Sobic008G140000 Sobic008G140000 Sobic003G077600--Sobic008G140000 Sobic003G077600--Sobic006G213200 Sobic003G077600--Sobic002G139700 Sobic007G129100 Sobic007G129100 Sobic003G077600--Sobic007G129100 Sobic003G395600--Sobic003G301400 Sobic003G395600--Sobic002G284600 Sobic008G083600 Sobic008G083600 Sobic003G395600--Sobic008G083600 Sobic003G395600--Sobic001G215700 Sobic003G395600--Sobic007G177700 Sobic003G395600--Sobic003G009501 Sobic003G395600--Sobic010G056100 Sobic003G395600--Sobic010G195100 Sobic003G395600--Sobic004G128100 Sobic007G073400 Sobic007G073400 Sobic001G192900--Sobic007G073400 Sobic004G212800 Sobic004G212800 Sobic001G192900--Sobic004G212800 Sobic009G231300 Sobic009G231300 Sobic001G192900--Sobic009G231300 Sobic008G009500 Sobic008G009500 Sobic001G192900--Sobic008G009500 Sobic010G248200 Sobic010G248200 Sobic001G192900--Sobic010G248200 Sobic001G543900 Sobic001G543900 Sobic001G192900--Sobic001G543900 Sobic005G130200 Sobic005G130200 Sobic001G192900--Sobic005G130200 Sobic004G076732 Sobic004G076732 Sobic001G192900--Sobic004G076732 Sobic004G143700 Sobic004G143700 Sobic001G192900--Sobic004G143700
Octagon: transcription factors


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