Gene annotation
Transcriptome id Sobic.008G182500.1
Synonym ATOSM34, Sb08g022410, OSM34
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
thaumatin, putative, expressed
UniProt C5YSK3
Pfam PF00314
Panther DB PTHR31048 PTHR31048:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G11650 : osmotin 34
RAP-DB (Rice) LOC_Os12g43440.1 : thaumatin, putative, expressed
MaizeGDB (Corn) Zm00025a004799
Brachypodium KQJ86095
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G132200 CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
2 Sobic.008G108900 GRF zinc finger family protein, expressed -
3 Sobic.009G196700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
4 Sobic.005G203400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NBS-LRR type disease resistance protein, putative, expressed -
5 Sobic.005G212600 NBS-LRR disease resistance protein, putative, expressed -
6 Sobic.002G062300 expressed protein -
7 Sobic.009G113600 - -
8 Sobic.007G115000 - -
9 Sobic.009G109101 - -
10 Sobic.008G091900 - -
11 Sobic.008G031350 - -
12 Sobic.007G059300 - -
13 Sobic.002G221200 zinc knuckle domain containing protein, expressed -
14 Sobic.008G009500 pentatricopeptide, putative, expressed -
15 Sobic.010G208500 - -
16 Sobic.001G253100 3-5 exonuclease family protein, putative, expressed -
17 Sobic.003G031750 - -
18 Sobic.005G108300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@OsGH3.3 - Probable indole-3-acetic acid-amido synthetase, expressed K14506: jasmonic acid-amino synthetase
19 Sobic.009G026400 - -
20 Sobic.002G051400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed K00485: dimethylaniline monooxygenase (N-oxide forming)


Gene co-expression network
sample Sobic008G182500 Sobic008G182500 Sobic006G132200 Sobic006G132200 Sobic008G182500--Sobic006G132200 Sobic008G108900 Sobic008G108900 Sobic008G182500--Sobic008G108900 Sobic009G196700 Sobic009G196700 Sobic008G182500--Sobic009G196700 Sobic005G203400 Sobic005G203400 Sobic008G182500--Sobic005G203400 Sobic005G212600 Sobic005G212600 Sobic008G182500--Sobic005G212600 Sobic002G062300 Sobic002G062300 Sobic008G182500--Sobic002G062300 Sobic009G113600 Sobic009G113600 Sobic008G182500--Sobic009G113600 Sobic007G115000 Sobic007G115000 Sobic008G182500--Sobic007G115000 Sobic009G109101 Sobic009G109101 Sobic008G182500--Sobic009G109101 Sobic006G132200--Sobic008G108900 Sobic006G132200--Sobic009G196700 Sobic006G132200--Sobic002G062300 Sobic006G132200--Sobic009G113600 Sobic006G132200--Sobic005G212600 Sobic007G059300 Sobic007G059300 Sobic006G132200--Sobic007G059300 Sobic003G031750 Sobic003G031750 Sobic006G132200--Sobic003G031750 Sobic008G091900 Sobic008G091900 Sobic006G132200--Sobic008G091900 Sobic008G031350 Sobic008G031350 Sobic006G132200--Sobic008G031350 Sobic008G108900--Sobic006G132200 Sobic008G108900--Sobic009G196700 Sobic008G108900--Sobic002G062300 Sobic008G108900--Sobic009G113600 Sobic008G108900--Sobic007G059300 Sobic008G108900--Sobic005G212600 Sobic003G176100 Sobic003G176100 Sobic008G108900--Sobic003G176100 Sobic002G051400 Sobic002G051400 Sobic008G108900--Sobic002G051400 Sobic008G108900--Sobic003G031750 Sobic009G196700--Sobic009G113600 Sobic009G196700--Sobic008G108900 Sobic009G196700--Sobic007G059300 Sobic009G196700--Sobic006G132200 Sobic009G196700--Sobic002G062300 Sobic009G196700--Sobic003G031750 SobicK024000 SobicK024000 Sobic009G196700--SobicK024000 Sobic008G036500 Sobic008G036500 Sobic009G196700--Sobic008G036500 Sobic009G196700--Sobic003G176100 Sobic005G203400--Sobic005G212600 Sobic005G203400--Sobic002G062300 Sobic005G203400--Sobic008G031350 Sobic005G203400--Sobic009G113600 Sobic008G009500 Sobic008G009500 Sobic005G203400--Sobic008G009500 Sobic007G073400 Sobic007G073400 Sobic005G203400--Sobic007G073400 Sobic005G203400--Sobic006G132200 Sobic001G253100 Sobic001G253100 Sobic005G203400--Sobic001G253100 Sobic005G203400--Sobic009G196700 Sobic005G212600--Sobic002G062300 Sobic005G212600--Sobic001G253100 Sobic005G212600--Sobic009G113600 Sobic005G212600--Sobic006G132200 Sobic005G212600--Sobic008G108900 Sobic005G212600--Sobic008G091900 Sobic002G221200 Sobic002G221200 Sobic005G212600--Sobic002G221200 Sobic005G212600--Sobic008G009500 Sobic005G212600--SobicK024000 Sobic002G062300--Sobic009G113600 Sobic002G062300--Sobic007G059300 Sobic002G062300--SobicK024000 Sobic002G062300--Sobic005G212600 Sobic002G062300--Sobic003G031750 Sobic002G062300--Sobic008G009500 Sobic002G062300--Sobic008G108900 Sobic002G062300--Sobic009G196700 Sobic002G062300--Sobic001G253100 Sobic009G113600--Sobic002G062300 Sobic009G113600--Sobic007G059300 Sobic009G113600--SobicK024000 Sobic009G113600--Sobic009G196700 Sobic009G113600--Sobic008G009500 Sobic009G113600--Sobic008G108900 Sobic009G113600--Sobic003G031750 Sobic009G113600--Sobic008G031350 Sobic010G146200 Sobic010G146200 Sobic009G113600--Sobic010G146200 Sobic007G115000--Sobic005G212600 Sobic002G285200 Sobic002G285200 Sobic007G115000--Sobic002G285200 Sobic007G115000--Sobic001G253100 Sobic007G115000--Sobic008G091900 Sobic007G115000--Sobic006G132200 Sobic007G115000--Sobic002G062300 Sobic004G164650 Sobic004G164650 Sobic007G115000--Sobic004G164650 Sobic007G115000--Sobic008G036500 Sobic005G117801 Sobic005G117801 Sobic007G115000--Sobic005G117801 Sobic010G208500 Sobic010G208500 Sobic009G109101--Sobic010G208500 Sobic009G109101--Sobic006G132200 Sobic009G109101--Sobic008G108900 Sobic009G059600 Sobic009G059600 Sobic009G109101--Sobic009G059600 Sobic009G109101--Sobic005G212600 Sobic009G109101--Sobic002G062300 Sobic009G109101--Sobic007G115000 Sobic004G286900 Sobic004G286900 Sobic009G109101--Sobic004G286900 Sobic003G424100 Sobic003G424100 Sobic009G109101--Sobic003G424100
Octagon: transcription factors


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