Gene annotation
Transcriptome id Sobic.003G267700.1
Synonym ATPGP4, P-glycoprotein, Sb03g032030, MDR4, SbPGP7, ABCB4, PGP4
Functional annotation "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments" (PubMedID : 20528920)
MDR-like ABC transporter, putative, expressed
UniProt A0A1B6Q5J0
Pfam PF00005 PF00664
Panther DB PTHR24221 PTHR24221:SF199
NCBI CDD -
KEGG Orthology K05658; ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016021integral component of membrane GO:0006810transport


Orthologs (automatic annotation)
TAIR AT2G47000 : ATP binding cassette subfamily B4
RAP-DB (Rice) LOC_Os01g50160.1 : MDR-like ABC transporter, putative, expressed
MaizeGDB (Corn) Zm00025a036501 , Zm00025a036502 , Zm00025a027910
Brachypodium PNT72642 , KQK09335 , KQK09336 , PNT72653 , PNT72656 , PNT72654
Barley HORVU2Hr1G001530.9 , HORVU2Hr1G001530.8 , HORVU2Hr1G001530.7 , HORVU2Hr1G001530.6 , HORVU2Hr1G001530.5 , HORVU2Hr1G001530.4 , HORVU2Hr1G001530.3 , HORVU2Hr1G001530.2 , HORVU2Hr1G001530.1 , HORVU2Hr1G001630.8 , HORVU2Hr1G001630.9 , HORVU2Hr1G001630.4 , HORVU2Hr1G001630.5 , HORVU2Hr1G001630.6 , HORVU2Hr1G001630.7 , HORVU2Hr1G001630.1 , HORVU2Hr1G001630.2 , HORVU2Hr1G001630.3 , HORVU3Hr1G065390.45 , HORVU3Hr1G065390.44 , HORVU3Hr1G065390.47 , HORVU3Hr1G065390.46 , HORVU3Hr1G065390.41 , HORVU3Hr1G065390.40 , HORVU3Hr1G065390.43 , HORVU3Hr1G065390.42 , HORVU3Hr1G065390.5 , HORVU3Hr1G065390.6 , HORVU3Hr1G065390.7 , HORVU3Hr1G065390.1 , HORVU3Hr1G065390.2 , HORVU3Hr1G065390.3 , HORVU3Hr1G065390.8 , HORVU3Hr1G065390.9 , HORVU3Hr1G065390.29 , HORVU3Hr1G065390.28 , HORVU3Hr1G065390.27 , HORVU3Hr1G065390.26 , HORVU3Hr1G065390.24 , HORVU3Hr1G065390.23 , HORVU3Hr1G065390.22 , HORVU3Hr1G065390.21 , HORVU3Hr1G065390.20 , HORVU3Hr1G065390.38 , HORVU3Hr1G065390.39 , HORVU3Hr1G065390.34 , HORVU3Hr1G065390.35 , HORVU3Hr1G065390.36 , HORVU3Hr1G065390.37 , HORVU3Hr1G065390.30 , HORVU3Hr1G065390.31 , HORVU3Hr1G065390.32 , HORVU3Hr1G065390.33 , HORVU3Hr1G065390.16 , HORVU3Hr1G065390.17 , HORVU3Hr1G065390.14 , HORVU3Hr1G065390.15 , HORVU3Hr1G065390.12 , HORVU3Hr1G065390.13 , HORVU3Hr1G065390.10 , HORVU3Hr1G065390.11 , HORVU3Hr1G065390.18 , HORVU3Hr1G065390.19 , HORVU2Hr1G001530.12 , HORVU2Hr1G001530.11 , HORVU2Hr1G001530.10 , HORVU2Hr1G001630.10
Wheat TraesCS2B02G012300 , TraesCS3D02G257500 , TraesCS2A02G009600 , TraesCS2B02G012200 , TraesCS6B02G145700 , TraesCS2A02G009900 , TraesCS3B02G290300 , TraesCS3B02G290300 , TraesCS2A02G009700 , TraesCS3A02G257500 , TraesCS3A02G257500 , TraesCS2D02G010400 , TraesCS2B02G012100 , TraesCS2B02G012100 , TraesCS2B02G012100 , TraesCS2B02G012100 , TraesCS2D02G010500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G042300 HVA22, putative, expressed K17338: receptor expression-enhancing protein 1/2/3/4
2 Sobic.009G239700 VQ domain containing protein, putative, expressed -
3 Sobic.001G349300 organic cation transporter-related, putative, expressed -
4 Sobic.003G444900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ankyrin repeat domain-containing protein 28, putative, expressed -
5 Sobic.008G191200 ATPase 3, putative, expressed -
6 Sobic.006G205800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@plant protein of unknown function domain containing protein, expressed -
7 Sobic.001G100200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PIII1 - Proteinase inhibitor II family protein precursor, expressed -
8 Sobic.003G079466 - -
9 Sobic.006G058400 Trihelix Family(PubMedID : 24864043)@transcription factor, putative, expressed -
10 Sobic.007G227500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
11 Sobic.006G112000 expressed protein -
12 Sobic.004G338200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsWAK24 - OsWAK receptor-like protein kinase, expressed -
13 Sobic.003G348900 disease resistance-responsive family protein, putative, expressed -
14 Sobic.002G215866 - -
15 Sobic.002G281100 plastocyanin-like domain containing protein, putative, expressed -
16 Sobic.006G164500 protein kinase domain containing protein, expressed -
17 Sobic.003G223600 hydroquinone glucosyltransferase, putative, expressed K08237: hydroquinone glucosyltransferase
18 Sobic.004G044800 phytosulfokine receptor precursor, putative, expressed -
19 Sobic.009G105500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@D-mannose binding lectin family protein, expressed -
20 Sobic.006G272000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@csAtPR5, putative, expressed -


Gene co-expression network
sample Sobic003G267700 Sobic003G267700 Sobic008G042300 Sobic008G042300 Sobic003G267700--Sobic008G042300 Sobic009G239700 Sobic009G239700 Sobic003G267700--Sobic009G239700 Sobic001G349300 Sobic001G349300 Sobic003G267700--Sobic001G349300 Sobic003G444900 Sobic003G444900 Sobic003G267700--Sobic003G444900 Sobic008G191200 Sobic008G191200 Sobic003G267700--Sobic008G191200 Sobic006G205800 Sobic006G205800 Sobic003G267700--Sobic006G205800 Sobic001G100200 Sobic001G100200 Sobic003G267700--Sobic001G100200 Sobic003G079466 Sobic003G079466 Sobic003G267700--Sobic003G079466 Sobic006G058400 Sobic006G058400 Sobic003G267700--Sobic006G058400 Sobic008G042300--Sobic006G058400 Sobic008G042300--Sobic003G267700 Sobic004G037100 Sobic004G037100 Sobic008G042300--Sobic004G037100 Sobic004G243000 Sobic004G243000 Sobic008G042300--Sobic004G243000 Sobic009G148800 Sobic009G148800 Sobic008G042300--Sobic009G148800 Sobic003G226600 Sobic003G226600 Sobic008G042300--Sobic003G226600 Sobic004G046400 Sobic004G046400 Sobic008G042300--Sobic004G046400 Sobic002G168400 Sobic002G168400 Sobic008G042300--Sobic002G168400 Sobic010G192700 Sobic010G192700 Sobic008G042300--Sobic010G192700 Sobic003G072801 Sobic003G072801 Sobic009G239700--Sobic003G072801 Sobic005G028000 Sobic005G028000 Sobic009G239700--Sobic005G028000 Sobic010G263950 Sobic010G263950 Sobic009G239700--Sobic010G263950 Sobic001G135000 Sobic001G135000 Sobic009G239700--Sobic001G135000 Sobic002G375950 Sobic002G375950 Sobic009G239700--Sobic002G375950 Sobic009G200750 Sobic009G200750 Sobic009G239700--Sobic009G200750 Sobic001G463700 Sobic001G463700 Sobic009G239700--Sobic001G463700 Sobic003G193400 Sobic003G193400 Sobic009G239700--Sobic003G193400 Sobic006G031866 Sobic006G031866 Sobic009G239700--Sobic006G031866 Sobic006G163033 Sobic006G163033 Sobic001G349300--Sobic006G163033 Sobic002G117300 Sobic002G117300 Sobic001G349300--Sobic002G117300 Sobic003G427400 Sobic003G427400 Sobic001G349300--Sobic003G427400 Sobic001G052500 Sobic001G052500 Sobic001G349300--Sobic001G052500 Sobic004G044700 Sobic004G044700 Sobic001G349300--Sobic004G044700 Sobic007G079500 Sobic007G079500 Sobic001G349300--Sobic007G079500 Sobic003G223600 Sobic003G223600 Sobic001G349300--Sobic003G223600 Sobic008G017400 Sobic008G017400 Sobic001G349300--Sobic008G017400 Sobic001G349300--Sobic003G079466 Sobic002G038733 Sobic002G038733 Sobic003G444900--Sobic002G038733 Sobic003G444900--Sobic003G267700 Sobic003G444900--Sobic008G191200 Sobic009G251700 Sobic009G251700 Sobic003G444900--Sobic009G251700 Sobic004G219700 Sobic004G219700 Sobic003G444900--Sobic004G219700 Sobic002G172000 Sobic002G172000 Sobic003G444900--Sobic002G172000 Sobic004G304700 Sobic004G304700 Sobic003G444900--Sobic004G304700 Sobic004G299300 Sobic004G299300 Sobic003G444900--Sobic004G299300 Sobic010G061300 Sobic010G061300 Sobic003G444900--Sobic010G061300 Sobic010G132100 Sobic010G132100 Sobic008G191200--Sobic010G132100 Sobic009G182500 Sobic009G182500 Sobic008G191200--Sobic009G182500 Sobic003G134100 Sobic003G134100 Sobic008G191200--Sobic003G134100 Sobic004G338200 Sobic004G338200 Sobic008G191200--Sobic004G338200 Sobic004G176950 Sobic004G176950 Sobic008G191200--Sobic004G176950 Sobic003G267100 Sobic003G267100 Sobic008G191200--Sobic003G267100 Sobic009G223400 Sobic009G223400 Sobic008G191200--Sobic009G223400 Sobic009G025800 Sobic009G025800 Sobic008G191200--Sobic009G025800 Sobic006G094800 Sobic006G094800 Sobic008G191200--Sobic006G094800 Sobic001G207301 Sobic001G207301 Sobic006G205800--Sobic001G207301 Sobic006G112000 Sobic006G112000 Sobic006G205800--Sobic006G112000 Sobic003G314200 Sobic003G314200 Sobic006G205800--Sobic003G314200 Sobic003G348900 Sobic003G348900 Sobic006G205800--Sobic003G348900 Sobic001G097800 Sobic001G097800 Sobic006G205800--Sobic001G097800 Sobic006G205800--Sobic006G094800 Sobic008G040800 Sobic008G040800 Sobic006G205800--Sobic008G040800 Sobic007G159300 Sobic007G159300 Sobic006G205800--Sobic007G159300 Sobic002G215866 Sobic002G215866 Sobic006G205800--Sobic002G215866 Sobic003G080900 Sobic003G080900 Sobic001G100200--Sobic003G080900 Sobic001G396200 Sobic001G396200 Sobic001G100200--Sobic001G396200 Sobic001G100200--Sobic003G267700 Sobic006G054900 Sobic006G054900 Sobic001G100200--Sobic006G054900 Sobic010G087300 Sobic010G087300 Sobic001G100200--Sobic010G087300 Sobic010G117100 Sobic010G117100 Sobic001G100200--Sobic010G117100 Sobic010G117200 Sobic010G117200 Sobic001G100200--Sobic010G117200 Sobic002G017600 Sobic002G017600 Sobic001G100200--Sobic002G017600 Sobic003G280600 Sobic003G280600 Sobic001G100200--Sobic003G280600 Sobic003G225000 Sobic003G225000 Sobic003G079466--Sobic003G225000 Sobic003G079466--Sobic007G079500 Sobic010G234100 Sobic010G234100 Sobic003G079466--Sobic010G234100 Sobic002G281100 Sobic002G281100 Sobic003G079466--Sobic002G281100 Sobic003G079466--Sobic001G052500 Sobic009G158200 Sobic009G158200 Sobic003G079466--Sobic009G158200 Sobic007G122866 Sobic007G122866 Sobic003G079466--Sobic007G122866 Sobic004G287000 Sobic004G287000 Sobic003G079466--Sobic004G287000 Sobic003G079466--Sobic003G223600 Sobic006G058400--Sobic008G042300 Sobic006G058400--Sobic010G192700 Sobic003G363600 Sobic003G363600 Sobic006G058400--Sobic003G363600 Sobic004G341600 Sobic004G341600 Sobic006G058400--Sobic004G341600 Sobic002G153600 Sobic002G153600 Sobic006G058400--Sobic002G153600 Sobic004G157700 Sobic004G157700 Sobic006G058400--Sobic004G157700 Sobic006G058400--Sobic004G299300 Sobic009G027200 Sobic009G027200 Sobic006G058400--Sobic009G027200 Sobic009G105500 Sobic009G105500 Sobic006G058400--Sobic009G105500
Octagon: transcription factors


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