Gene annotation
Transcriptome id Sobic.008G042300.1
Synonym HVA22J, Sb08g003640
Functional annotation HVA22, putative, expressed
UniProt C5YS62
Pfam PF03134
Panther DB PTHR12300 PTHR12300:SF46
NCBI CDD -
KEGG Orthology K17338; receptor expression-enhancing protein 1/2/3/4
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G36020 : HVA22-like protein J
RAP-DB (Rice) LOC_Os12g06180.1 : HVA22, putative, expressed
MaizeGDB (Corn) Zm00025a053943
Brachypodium KQJ92173 , KQJ92175 , KQJ92174
Barley HORVU5Hr1G040210.8 , HORVU5Hr1G040210.9 , HORVU5Hr1G040210.6 , HORVU5Hr1G040210.7 , HORVU5Hr1G040210.4 , HORVU5Hr1G040210.5 , HORVU5Hr1G040210.2 , HORVU5Hr1G040210.3 , HORVU5Hr1G040210.1 , HORVU4Hr1G021390.11 , HORVU4Hr1G021390.10 , HORVU5Hr1G040210.14 , HORVU5Hr1G040210.15 , HORVU5Hr1G040210.10 , HORVU5Hr1G040210.11 , HORVU5Hr1G040210.12 , HORVU5Hr1G040210.13 , HORVU4Hr1G021390.9 , HORVU4Hr1G021390.7 , HORVU4Hr1G021390.6 , HORVU4Hr1G021390.5 , HORVU4Hr1G021390.4 , HORVU4Hr1G021390.3 , HORVU4Hr1G021390.2 , HORVU4Hr1G021390.1 , HORVU4Hr1G021390.8
Wheat TraesCS4D02G114200 , TraesCS4D02G114200 , TraesCS5A02G126100 , TraesCS5B02G125300 , TraesCS5B02G125300 , TraesCS5B02G125300 , TraesCS4B02G116600 , TraesCS4A02G198800 , TraesCS5D02G133800
Populus -


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cDNA sequences
Sobic.008G042300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G058400 Trihelix Family(PubMedID : 24864043)@transcription factor, putative, expressed -
2 Sobic.003G267700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
3 Sobic.004G037100 cycloartenol synthase, putative, expressed K01853: cycloartenol synthase
4 Sobic.004G243000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@metalloendoproteinase 1 precursor, putative, expressed -
5 Sobic.009G148800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peptide transporter, putative, expressed -
6 Sobic.003G226600 WRKY12, expressed -
7 Sobic.004G046400 rhodanese-like domain containing protein, putative, expressed -
8 Sobic.002G168400 RGH2B, putative, expressed -
9 Sobic.010G192700 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
10 Sobic.006G164500 protein kinase domain containing protein, expressed -
11 Sobic.006G233800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Transferase family protein (At)(PubMedID : 27208977)@transferase family protein, putative, expressed -
12 Sobic.003G249500 expressed protein -
13 Sobic.004G191901 - K09264: MADS-box transcription factor, plant
14 Sobic.004G304550 - -
15 Sobic.002G373900 lung seven transmembrane domain containing protein, putative, expressed -
16 Sobic.003G324800 expressed protein -
17 Sobic.003G134100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@eukaryotic translation initiation factor 6, putative, expressed K03264: translation initiation factor 6
18 Sobic.003G348900 disease resistance-responsive family protein, putative, expressed -
19 Sobic.002G153600 expressed protein -
20 Sobic.010G224100 expressed protein -


Gene co-expression network
sample Sobic008G042300 Sobic008G042300 Sobic006G058400 Sobic006G058400 Sobic008G042300--Sobic006G058400 Sobic003G267700 Sobic003G267700 Sobic008G042300--Sobic003G267700 Sobic004G037100 Sobic004G037100 Sobic008G042300--Sobic004G037100 Sobic004G243000 Sobic004G243000 Sobic008G042300--Sobic004G243000 Sobic009G148800 Sobic009G148800 Sobic008G042300--Sobic009G148800 Sobic003G226600 Sobic003G226600 Sobic008G042300--Sobic003G226600 Sobic004G046400 Sobic004G046400 Sobic008G042300--Sobic004G046400 Sobic002G168400 Sobic002G168400 Sobic008G042300--Sobic002G168400 Sobic010G192700 Sobic010G192700 Sobic008G042300--Sobic010G192700 Sobic006G058400--Sobic008G042300 Sobic006G058400--Sobic010G192700 Sobic003G363600 Sobic003G363600 Sobic006G058400--Sobic003G363600 Sobic004G341600 Sobic004G341600 Sobic006G058400--Sobic004G341600 Sobic002G153600 Sobic002G153600 Sobic006G058400--Sobic002G153600 Sobic004G157700 Sobic004G157700 Sobic006G058400--Sobic004G157700 Sobic004G299300 Sobic004G299300 Sobic006G058400--Sobic004G299300 Sobic009G027200 Sobic009G027200 Sobic006G058400--Sobic009G027200 Sobic009G105500 Sobic009G105500 Sobic006G058400--Sobic009G105500 Sobic003G267700--Sobic008G042300 Sobic009G239700 Sobic009G239700 Sobic003G267700--Sobic009G239700 Sobic001G349300 Sobic001G349300 Sobic003G267700--Sobic001G349300 Sobic003G444900 Sobic003G444900 Sobic003G267700--Sobic003G444900 Sobic008G191200 Sobic008G191200 Sobic003G267700--Sobic008G191200 Sobic006G205800 Sobic006G205800 Sobic003G267700--Sobic006G205800 Sobic001G100200 Sobic001G100200 Sobic003G267700--Sobic001G100200 Sobic003G079466 Sobic003G079466 Sobic003G267700--Sobic003G079466 Sobic003G267700--Sobic006G058400 Sobic004G037100--Sobic002G168400 Sobic004G191901 Sobic004G191901 Sobic004G037100--Sobic004G191901 Sobic009G092300 Sobic009G092300 Sobic004G037100--Sobic009G092300 Sobic003G249500 Sobic003G249500 Sobic004G037100--Sobic003G249500 Sobic009G074200 Sobic009G074200 Sobic004G037100--Sobic009G074200 Sobic001G494200 Sobic001G494200 Sobic004G037100--Sobic001G494200 Sobic001G487900 Sobic001G487900 Sobic004G037100--Sobic001G487900 Sobic007G137501 Sobic007G137501 Sobic004G037100--Sobic007G137501 Sobic002G138400 Sobic002G138400 Sobic004G037100--Sobic002G138400 Sobic004G338200 Sobic004G338200 Sobic004G243000--Sobic004G338200 Sobic006G233800 Sobic006G233800 Sobic004G243000--Sobic006G233800 Sobic007G194400 Sobic007G194400 Sobic004G243000--Sobic007G194400 Sobic002G373900 Sobic002G373900 Sobic004G243000--Sobic002G373900 Sobic010G036400 Sobic010G036400 Sobic004G243000--Sobic010G036400 Sobic003G314200 Sobic003G314200 Sobic004G243000--Sobic003G314200 Sobic003G268800 Sobic003G268800 Sobic004G243000--Sobic003G268800 Sobic009G215400 Sobic009G215400 Sobic004G243000--Sobic009G215400 Sobic003G323800 Sobic003G323800 Sobic004G243000--Sobic003G323800 Sobic009G140150 Sobic009G140150 Sobic009G148800--Sobic009G140150 Sobic009G148800--Sobic009G105500 Sobic009G148800--Sobic008G042300 Sobic001G044500 Sobic001G044500 Sobic009G148800--Sobic001G044500 Sobic001G491800 Sobic001G491800 Sobic009G148800--Sobic001G491800 Sobic003G272600 Sobic003G272600 Sobic009G148800--Sobic003G272600 Sobic007G104600 Sobic007G104600 Sobic009G148800--Sobic007G104600 Sobic009G148800--Sobic004G299300 Sobic007G071800 Sobic007G071800 Sobic009G148800--Sobic007G071800 Sobic001G450900 Sobic001G450900 Sobic003G226600--Sobic001G450900 Sobic005G021400 Sobic005G021400 Sobic003G226600--Sobic005G021400 Sobic001G207301 Sobic001G207301 Sobic003G226600--Sobic001G207301 Sobic005G104900 Sobic005G104900 Sobic003G226600--Sobic005G104900 Sobic006G217400 Sobic006G217400 Sobic003G226600--Sobic006G217400 Sobic001G535850 Sobic001G535850 Sobic003G226600--Sobic001G535850 Sobic002G401533 Sobic002G401533 Sobic003G226600--Sobic002G401533 Sobic003G226600--Sobic009G027200 Sobic003G161900 Sobic003G161900 Sobic003G226600--Sobic003G161900 Sobic002G379700 Sobic002G379700 Sobic004G046400--Sobic002G379700 Sobic004G046400--Sobic003G249500 Sobic004G046400--Sobic002G168400 Sobic002G356500 Sobic002G356500 Sobic004G046400--Sobic002G356500 Sobic009G183800 Sobic009G183800 Sobic004G046400--Sobic009G183800 Sobic003G212300 Sobic003G212300 Sobic004G046400--Sobic003G212300 Sobic004G106500 Sobic004G106500 Sobic004G046400--Sobic004G106500 Sobic008G019900 Sobic008G019900 Sobic004G046400--Sobic008G019900 Sobic004G046400--Sobic004G037100 Sobic002G168400--Sobic004G037100 Sobic002G168400--Sobic004G046400 Sobic002G424500 Sobic002G424500 Sobic002G168400--Sobic002G424500 Sobic002G168400--Sobic004G191901 Sobic002G168400--Sobic003G249500 Sobic002G168400--Sobic003G212300 Sobic002G325500 Sobic002G325500 Sobic002G168400--Sobic002G325500 Sobic002G168400--Sobic004G106500 Sobic001G299200 Sobic001G299200 Sobic002G168400--Sobic001G299200 Sobic010G229300 Sobic010G229300 Sobic010G192700--Sobic010G229300 Sobic003G186066 Sobic003G186066 Sobic010G192700--Sobic003G186066 Sobic003G120900 Sobic003G120900 Sobic010G192700--Sobic003G120900 Sobic010G192700--Sobic002G153600 Sobic003G348900 Sobic003G348900 Sobic010G192700--Sobic003G348900 Sobic006G232100 Sobic006G232100 Sobic010G192700--Sobic006G232100 Sobic006G112000 Sobic006G112000 Sobic010G192700--Sobic006G112000 Sobic003G008200 Sobic003G008200 Sobic010G192700--Sobic003G008200 Sobic001G097800 Sobic001G097800 Sobic010G192700--Sobic001G097800
Octagon: transcription factors


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