Gene annotation
Transcriptome id Sobic.004G037100.1
Synonym CAS1, Sb04g003190
Functional annotation cycloartenol synthase, putative, expressed
UniProt C5XUJ5
Pfam PF00432
Panther DB PTHR11764 PTHR11764:SF15
NCBI CDD -
KEGG Orthology K01853; cycloartenol synthase
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT2G07050 : cycloartenol synthase 1
RAP-DB (Rice) LOC_Os02g04710.1 : cycloartenol synthase, putative, expressed
MaizeGDB (Corn) Zm00025a018946 , Zm00025a034899
Brachypodium KQJ93262 , KQJ93263 , KQJ93264 , PNT65847 , PNT65846 , PNT65845 , PNT65844 , PNT65843 , PNT65848 , KQJ93257
Barley HORVU6Hr1G019840.6 , HORVU6Hr1G019840.7 , HORVU6Hr1G019840.4 , HORVU6Hr1G019840.5 , HORVU6Hr1G019840.2 , HORVU6Hr1G019840.3 , HORVU6Hr1G019840.1 , HORVU6Hr1G019840.8 , HORVU6Hr1G019840.9 , HORVU5Hr1G122220.9 , HORVU5Hr1G122220.1 , HORVU6Hr1G019840.18 , HORVU6Hr1G019840.19 , HORVU6Hr1G019840.14 , HORVU6Hr1G019840.15 , HORVU6Hr1G019840.16 , HORVU6Hr1G019840.17 , HORVU6Hr1G019840.10 , HORVU6Hr1G019840.12 , HORVU6Hr1G019840.13
Wheat TraesCS6A02G110200 , TraesCS6D02G098600 , TraesCS6D02G098600 , TraesCS6D02G099400 , TraesCS6D02G099400 , TraesCS6D02G099400 , TraesCS6D02G099400 , TraesCS6A02G110300 , TraesCS5A02G005900 , TraesCS6D02G098800 , TraesCS2B02G407300 , TraesCS5D02G006600 , TraesCS5D02G006600 , TraesCS6B02G139000 , TraesCS6B02G139000 , TraesCS6B02G139000 , TraesCS5B02G545900 , TraesCS6B02G138500 , TraesCS6A02G110800 , TraesCS6A02G110800 , TraesCS5B02G004800 , TraesCS2B02G407200 , TraesCS2D02G387000 , TraesCS5D02G006700 , TraesCS6D02G099400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G168400 RGH2B, putative, expressed -
2 Sobic.004G191901 - K09264: MADS-box transcription factor, plant
3 Sobic.009G092300 expressed protein -
4 Sobic.003G249500 expressed protein -
5 Sobic.009G074200 - -
6 Sobic.001G494200 PPR repeat containing protein, expressed -
7 Sobic.001G487900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calcium-binding protein, putative, expressed K08272: CAB39, calcium binding protein 39
8 Sobic.007G137501 - -
9 Sobic.002G138400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed K01051: pectinesterase
10 Sobic.003G324800 expressed protein -
11 Sobic.004G106500 hydroquinone glucosyltransferase, putative, expressed -
12 Sobic.005G096450 - -
13 Sobic.001G075500 - -
14 Sobic.010G139200 photosystem II P680 chlorophyll A apoprotein, putative, expressed -
15 Sobic.007G149200 "DEP1/GGC2(Ortholog in rice:Huang et al., 2009(PubMedID : 31659905)@keratin-associated protein 5-4, putative, expressed -
16 Sobic.003G064901 - -
17 Sobic.004G210400 expressed protein -
18 Sobic.006G183100 RFC2 - Putative clamp loader of PCNA, replication factor C subunit 2, expressed K10755: replication factor C subunit 2/4
19 Sobic.004G087050 - -
20 Sobic.003G168200 - -


Gene co-expression network
sample Sobic004G037100 Sobic004G037100 Sobic002G168400 Sobic002G168400 Sobic004G037100--Sobic002G168400 Sobic004G191901 Sobic004G191901 Sobic004G037100--Sobic004G191901 Sobic009G092300 Sobic009G092300 Sobic004G037100--Sobic009G092300 Sobic003G249500 Sobic003G249500 Sobic004G037100--Sobic003G249500 Sobic009G074200 Sobic009G074200 Sobic004G037100--Sobic009G074200 Sobic001G494200 Sobic001G494200 Sobic004G037100--Sobic001G494200 Sobic001G487900 Sobic001G487900 Sobic004G037100--Sobic001G487900 Sobic007G137501 Sobic007G137501 Sobic004G037100--Sobic007G137501 Sobic002G138400 Sobic002G138400 Sobic004G037100--Sobic002G138400 Sobic002G168400--Sobic004G037100 Sobic004G046400 Sobic004G046400 Sobic002G168400--Sobic004G046400 Sobic002G424500 Sobic002G424500 Sobic002G168400--Sobic002G424500 Sobic002G168400--Sobic004G191901 Sobic002G168400--Sobic003G249500 Sobic003G212300 Sobic003G212300 Sobic002G168400--Sobic003G212300 Sobic002G325500 Sobic002G325500 Sobic002G168400--Sobic002G325500 Sobic004G106500 Sobic004G106500 Sobic002G168400--Sobic004G106500 Sobic001G299200 Sobic001G299200 Sobic002G168400--Sobic001G299200 Sobic009G016666 Sobic009G016666 Sobic004G191901--Sobic009G016666 Sobic001G450900 Sobic001G450900 Sobic004G191901--Sobic001G450900 Sobic010G035600 Sobic010G035600 Sobic004G191901--Sobic010G035600 Sobic010G185250 Sobic010G185250 Sobic004G191901--Sobic010G185250 Sobic007G065000 Sobic007G065000 Sobic004G191901--Sobic007G065000 Sobic004G337850 Sobic004G337850 Sobic004G191901--Sobic004G337850 Sobic007G145801 Sobic007G145801 Sobic004G191901--Sobic007G145801 Sobic006G057100 Sobic006G057100 Sobic004G191901--Sobic006G057100 Sobic009G101500 Sobic009G101500 Sobic004G191901--Sobic009G101500 Sobic010G180550 Sobic010G180550 Sobic009G092300--Sobic010G180550 Sobic007G126150 Sobic007G126150 Sobic009G092300--Sobic007G126150 Sobic009G092300--Sobic001G487900 Sobic009G143750 Sobic009G143750 Sobic009G092300--Sobic009G143750 Sobic007G207100 Sobic007G207100 Sobic009G092300--Sobic007G207100 Sobic004G210400 Sobic004G210400 Sobic009G092300--Sobic004G210400 Sobic003G369566 Sobic003G369566 Sobic009G092300--Sobic003G369566 Sobic002G150200 Sobic002G150200 Sobic009G092300--Sobic002G150200 Sobic001G075500 Sobic001G075500 Sobic009G092300--Sobic001G075500 Sobic002G373900 Sobic002G373900 Sobic003G249500--Sobic002G373900 Sobic001G029500 Sobic001G029500 Sobic003G249500--Sobic001G029500 Sobic003G249500--Sobic004G191901 Sobic001G128000 Sobic001G128000 Sobic003G249500--Sobic001G128000 Sobic006G233800 Sobic006G233800 Sobic003G249500--Sobic006G233800 Sobic003G160400 Sobic003G160400 Sobic003G249500--Sobic003G160400 Sobic010G267300 Sobic010G267300 Sobic003G249500--Sobic010G267300 Sobic008G033800 Sobic008G033800 Sobic003G249500--Sobic008G033800 Sobic003G119750 Sobic003G119750 Sobic003G249500--Sobic003G119750 Sobic010G139200 Sobic010G139200 Sobic009G074200--Sobic010G139200 Sobic006G183100 Sobic006G183100 Sobic009G074200--Sobic006G183100 Sobic003G369533 Sobic003G369533 Sobic009G074200--Sobic003G369533 Sobic003G172500 Sobic003G172500 Sobic009G074200--Sobic003G172500 Sobic004G087050 Sobic004G087050 Sobic009G074200--Sobic004G087050 Sobic003G168200 Sobic003G168200 Sobic009G074200--Sobic003G168200 Sobic009G074200--Sobic009G016666 SobicK032300 SobicK032300 Sobic009G074200--SobicK032300 Sobic003G168425 Sobic003G168425 Sobic009G074200--Sobic003G168425 Sobic001G494200--Sobic007G137501 Sobic008G108300 Sobic008G108300 Sobic001G494200--Sobic008G108300 Sobic003G393600 Sobic003G393600 Sobic001G494200--Sobic003G393600 Sobic001G494200--Sobic001G075500 Sobic001G245650 Sobic001G245650 Sobic001G494200--Sobic001G245650 Sobic003G064901 Sobic003G064901 Sobic001G494200--Sobic003G064901 Sobic010G254000 Sobic010G254000 Sobic001G494200--Sobic010G254000 Sobic005G002050 Sobic005G002050 Sobic001G494200--Sobic005G002050 Sobic001G494200--Sobic001G487900 Sobic001G487900--Sobic009G143750 Sobic001G487900--Sobic001G075500 Sobic006G124800 Sobic006G124800 Sobic001G487900--Sobic006G124800 Sobic001G487900--Sobic004G210400 Sobic003G172600 Sobic003G172600 Sobic001G487900--Sobic003G172600 Sobic003G169100 Sobic003G169100 Sobic001G487900--Sobic003G169100 Sobic001G487900--SobicK032300 Sobic001G487900--Sobic007G207100 Sobic001G487900--Sobic010G139200 Sobic007G149200 Sobic007G149200 Sobic007G137501--Sobic007G149200 Sobic005G096450 Sobic005G096450 Sobic007G137501--Sobic005G096450 Sobic003G218950 Sobic003G218950 Sobic007G137501--Sobic003G218950 Sobic007G137501--Sobic003G369533 Sobic007G137501--Sobic003G168200 Sobic005G116400 Sobic005G116400 Sobic007G137501--Sobic005G116400 Sobic003G352000 Sobic003G352000 Sobic007G137501--Sobic003G352000 Sobic002G278100 Sobic002G278100 Sobic007G137501--Sobic002G278100 Sobic003G169000 Sobic003G169000 Sobic007G137501--Sobic003G169000 Sobic002G138400--Sobic003G064901 Sobic009G102250 Sobic009G102250 Sobic002G138400--Sobic009G102250 Sobic002G138400--Sobic001G487900 Sobic001G182700 Sobic001G182700 Sobic002G138400--Sobic001G182700 Sobic002G138400--Sobic001G075500 Sobic006G016950 Sobic006G016950 Sobic002G138400--Sobic006G016950 Sobic002G138400--Sobic009G143750 Sobic004G111200 Sobic004G111200 Sobic002G138400--Sobic004G111200 Sobic002G138400--Sobic003G169100
Octagon: transcription factors


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