Gene annotation
Transcriptome id Sobic.002G168400.1,Sobic.002G168400.2
Synonym
Functional annotation RGH2B, putative, expressed
UniProt A0A1W0W4F2 , A0A1B6QBT5
Pfam PF00010 PF00931
Panther DB PTHR23155 PTHR23155:SF641
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G50950 : HOPZ-ACTIVATED RESISTANCE 1,Disease resistance protein (CC-NBS-LRR class) family
RAP-DB (Rice) LOC_Os11g45750.1,LOC_Os11g45750.2 : WRKY125, expressed
MaizeGDB (Corn) Zm00025a005089
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G037100 cycloartenol synthase, putative, expressed K01853: cycloartenol synthase
2 Sobic.004G046400 rhodanese-like domain containing protein, putative, expressed -
3 Sobic.002G424500 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
4 Sobic.004G191901 - K09264: MADS-box transcription factor, plant
5 Sobic.003G249500 expressed protein -
6 Sobic.003G212300 mitochondrial chaperone BCS1, putative, expressed -
7 Sobic.002G325500 ankyrin repeat family protein, putative, expressed -
8 Sobic.004G106500 hydroquinone glucosyltransferase, putative, expressed -
9 Sobic.001G299200 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
10 Sobic.006G073300 RNA recognition motif containing protein, putative, expressed -
11 Sobic.002G379700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
12 Sobic.001G397850 - -
13 Sobic.004G353650 - -
14 Sobic.001G029500 GDP-mannose transporter, putative, expressed K15356: VRG4, GDP-mannose transporter
15 Sobic.002G194900 proline-rich protein 6, putative, expressed -
16 Sobic.002G373900 lung seven transmembrane domain containing protein, putative, expressed -
17 Sobic.003G204750 - -
18 Sobic.K010100 expressed protein -
19 Sobic.003G348900 disease resistance-responsive family protein, putative, expressed -
20 Sobic.008G033800 ABCG protein(PubMedID : 21265893)@pleiotropic drug resistance protein 15, putative, expressed -


Gene co-expression network
sample Sobic002G168400 Sobic002G168400 Sobic004G037100 Sobic004G037100 Sobic002G168400--Sobic004G037100 Sobic004G046400 Sobic004G046400 Sobic002G168400--Sobic004G046400 Sobic002G424500 Sobic002G424500 Sobic002G168400--Sobic002G424500 Sobic004G191901 Sobic004G191901 Sobic002G168400--Sobic004G191901 Sobic003G249500 Sobic003G249500 Sobic002G168400--Sobic003G249500 Sobic003G212300 Sobic003G212300 Sobic002G168400--Sobic003G212300 Sobic002G325500 Sobic002G325500 Sobic002G168400--Sobic002G325500 Sobic004G106500 Sobic004G106500 Sobic002G168400--Sobic004G106500 Sobic001G299200 Sobic001G299200 Sobic002G168400--Sobic001G299200 Sobic004G037100--Sobic002G168400 Sobic004G037100--Sobic004G191901 Sobic009G092300 Sobic009G092300 Sobic004G037100--Sobic009G092300 Sobic004G037100--Sobic003G249500 Sobic009G074200 Sobic009G074200 Sobic004G037100--Sobic009G074200 Sobic001G494200 Sobic001G494200 Sobic004G037100--Sobic001G494200 Sobic001G487900 Sobic001G487900 Sobic004G037100--Sobic001G487900 Sobic007G137501 Sobic007G137501 Sobic004G037100--Sobic007G137501 Sobic002G138400 Sobic002G138400 Sobic004G037100--Sobic002G138400 Sobic002G379700 Sobic002G379700 Sobic004G046400--Sobic002G379700 Sobic004G046400--Sobic003G249500 Sobic004G046400--Sobic002G168400 Sobic002G356500 Sobic002G356500 Sobic004G046400--Sobic002G356500 Sobic009G183800 Sobic009G183800 Sobic004G046400--Sobic009G183800 Sobic004G046400--Sobic003G212300 Sobic004G046400--Sobic004G106500 Sobic008G019900 Sobic008G019900 Sobic004G046400--Sobic008G019900 Sobic004G046400--Sobic004G037100 Sobic002G424500--Sobic002G325500 Sobic007G005100 Sobic007G005100 Sobic002G424500--Sobic007G005100 Sobic007G061600 Sobic007G061600 Sobic002G424500--Sobic007G061600 Sobic002G424500--Sobic004G037100 Sobic002G424500--Sobic002G168400 Sobic008G033800 Sobic008G033800 Sobic002G424500--Sobic008G033800 SobicK010100 SobicK010100 Sobic002G424500--SobicK010100 Sobic010G192700 Sobic010G192700 Sobic002G424500--Sobic010G192700 Sobic003G348900 Sobic003G348900 Sobic002G424500--Sobic003G348900 Sobic009G016666 Sobic009G016666 Sobic004G191901--Sobic009G016666 Sobic001G450900 Sobic001G450900 Sobic004G191901--Sobic001G450900 Sobic010G035600 Sobic010G035600 Sobic004G191901--Sobic010G035600 Sobic010G185250 Sobic010G185250 Sobic004G191901--Sobic010G185250 Sobic007G065000 Sobic007G065000 Sobic004G191901--Sobic007G065000 Sobic004G337850 Sobic004G337850 Sobic004G191901--Sobic004G337850 Sobic007G145801 Sobic007G145801 Sobic004G191901--Sobic007G145801 Sobic006G057100 Sobic006G057100 Sobic004G191901--Sobic006G057100 Sobic009G101500 Sobic009G101500 Sobic004G191901--Sobic009G101500 Sobic002G373900 Sobic002G373900 Sobic003G249500--Sobic002G373900 Sobic001G029500 Sobic001G029500 Sobic003G249500--Sobic001G029500 Sobic003G249500--Sobic004G191901 Sobic001G128000 Sobic001G128000 Sobic003G249500--Sobic001G128000 Sobic006G233800 Sobic006G233800 Sobic003G249500--Sobic006G233800 Sobic003G160400 Sobic003G160400 Sobic003G249500--Sobic003G160400 Sobic010G267300 Sobic010G267300 Sobic003G249500--Sobic010G267300 Sobic003G249500--Sobic008G033800 Sobic003G119750 Sobic003G119750 Sobic003G249500--Sobic003G119750 Sobic007G108700 Sobic007G108700 Sobic003G212300--Sobic007G108700 Sobic003G212300--Sobic004G046400 Sobic005G096600 Sobic005G096600 Sobic003G212300--Sobic005G096600 Sobic003G024900 Sobic003G024900 Sobic003G212300--Sobic003G024900 Sobic003G212300--Sobic002G356500 Sobic004G163400 Sobic004G163400 Sobic003G212300--Sobic004G163400 Sobic001G021900 Sobic001G021900 Sobic003G212300--Sobic001G021900 Sobic002G235500 Sobic002G235500 Sobic003G212300--Sobic002G235500 Sobic002G042100 Sobic002G042100 Sobic003G212300--Sobic002G042100 Sobic001G035300 Sobic001G035300 Sobic002G325500--Sobic001G035300 Sobic002G325500--Sobic002G424500 Sobic002G325500--Sobic007G005100 Sobic002G325500--Sobic004G106500 Sobic001G228900 Sobic001G228900 Sobic002G325500--Sobic001G228900 Sobic002G325500--Sobic007G061600 Sobic008G078800 Sobic008G078800 Sobic002G325500--Sobic008G078800 Sobic002G325500--Sobic008G019900 Sobic002G325500--SobicK010100 Sobic004G106500--Sobic008G019900 Sobic004G187600 Sobic004G187600 Sobic004G106500--Sobic004G187600 Sobic004G106500--Sobic008G078800 Sobic004G106500--Sobic002G325500 Sobic004G106500--Sobic004G037100 Sobic004G106500--Sobic004G046400 Sobic002G165020 Sobic002G165020 Sobic004G106500--Sobic002G165020 Sobic006G266800 Sobic006G266800 Sobic004G106500--Sobic006G266800 Sobic004G106500--Sobic007G005100 Sobic006G083201 Sobic006G083201 Sobic001G299200--Sobic006G083201 Sobic004G163500 Sobic004G163500 Sobic001G299200--Sobic004G163500 Sobic003G112500 Sobic003G112500 Sobic001G299200--Sobic003G112500 Sobic004G058500 Sobic004G058500 Sobic001G299200--Sobic004G058500 Sobic003G323800 Sobic003G323800 Sobic001G299200--Sobic003G323800 Sobic001G299200--Sobic002G168400 Sobic001G299200--Sobic002G235500 Sobic001G299200--Sobic003G212300 Sobic001G397850 Sobic001G397850 Sobic001G299200--Sobic001G397850
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.