Gene annotation
Transcriptome id Sobic.002G325500.1
Synonym
Functional annotation ankyrin repeat family protein, putative, expressed
UniProt A0A1B6QEN6
Pfam PF12796
Panther DB PTHR24177:SF25 PTHR24177
NCBI CDD KOG4412; 26S proteasome regulatory complex, subunit PSMD10 KOG0508Ankyrin repeat protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G03460 : Ankyrin repeat family protein
RAP-DB (Rice) LOC_Os07g34830.1 : ankyrin repeat family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G035300 ZOS3-20 - C2H2 zinc finger protein, expressed -
2 Sobic.002G424500 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
3 Sobic.007G005100 L-asparaginase precursor protein, putative, expressed K13051: ASRGL1, L-asparaginase / beta-aspartyl-peptidase
4 Sobic.004G106500 hydroquinone glucosyltransferase, putative, expressed -
5 Sobic.001G228900 exostosin family domain containing protein, expressed -
6 Sobic.007G061600 expressed protein -
7 Sobic.008G078800 cytochrome P450, putative, expressed K05917: sterol 14alpha-demethylase
8 Sobic.008G019900 - -
9 Sobic.K010100 expressed protein -
10 Sobic.004G187600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
11 Sobic.007G199101 - -
12 Sobic.002G168400 RGH2B, putative, expressed -
13 Sobic.001G105000 basic helix-loop-helix protein, putative, expressed -
14 Sobic.006G246500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
15 Sobic.002G381200 expressed protein -
16 Sobic.008G033800 ABCG protein(PubMedID : 21265893)@pleiotropic drug resistance protein 15, putative, expressed -
17 Sobic.002G417600 ATOFP17/OFP17, putative, expressed -
18 Sobic.005G048400 NBS-LRR disease resistance protein, putative, expressed K13457: RPM1, disease resistance protein RPM1
19 Sobic.004G046400 rhodanese-like domain containing protein, putative, expressed -
20 Sobic.004G037100 cycloartenol synthase, putative, expressed K01853: cycloartenol synthase


Gene co-expression network
sample Sobic002G325500 Sobic002G325500 Sobic001G035300 Sobic001G035300 Sobic002G325500--Sobic001G035300 Sobic002G424500 Sobic002G424500 Sobic002G325500--Sobic002G424500 Sobic007G005100 Sobic007G005100 Sobic002G325500--Sobic007G005100 Sobic004G106500 Sobic004G106500 Sobic002G325500--Sobic004G106500 Sobic001G228900 Sobic001G228900 Sobic002G325500--Sobic001G228900 Sobic007G061600 Sobic007G061600 Sobic002G325500--Sobic007G061600 Sobic008G078800 Sobic008G078800 Sobic002G325500--Sobic008G078800 Sobic008G019900 Sobic008G019900 Sobic002G325500--Sobic008G019900 SobicK010100 SobicK010100 Sobic002G325500--SobicK010100 Sobic007G022300 Sobic007G022300 Sobic001G035300--Sobic007G022300 Sobic001G035300--Sobic001G228900 Sobic001G035300--Sobic002G325500 Sobic001G035300--Sobic004G106500 Sobic002G165020 Sobic002G165020 Sobic001G035300--Sobic002G165020 Sobic002G417600 Sobic002G417600 Sobic001G035300--Sobic002G417600 Sobic001G035300--Sobic008G019900 Sobic001G035300--SobicK010100 Sobic010G127500 Sobic010G127500 Sobic001G035300--Sobic010G127500 Sobic002G424500--Sobic002G325500 Sobic002G424500--Sobic007G005100 Sobic002G424500--Sobic007G061600 Sobic004G037100 Sobic004G037100 Sobic002G424500--Sobic004G037100 Sobic002G168400 Sobic002G168400 Sobic002G424500--Sobic002G168400 Sobic008G033800 Sobic008G033800 Sobic002G424500--Sobic008G033800 Sobic002G424500--SobicK010100 Sobic010G192700 Sobic010G192700 Sobic002G424500--Sobic010G192700 Sobic003G348900 Sobic003G348900 Sobic002G424500--Sobic003G348900 Sobic004G187600 Sobic004G187600 Sobic007G005100--Sobic004G187600 Sobic001G070100 Sobic001G070100 Sobic007G005100--Sobic001G070100 Sobic004G089100 Sobic004G089100 Sobic007G005100--Sobic004G089100 Sobic005G048400 Sobic005G048400 Sobic007G005100--Sobic005G048400 Sobic007G005100--Sobic002G325500 Sobic002G028566 Sobic002G028566 Sobic007G005100--Sobic002G028566 Sobic007G005100--Sobic008G078800 Sobic007G005100--Sobic007G061600 Sobic010G032500 Sobic010G032500 Sobic007G005100--Sobic010G032500 Sobic004G106500--Sobic008G019900 Sobic004G106500--Sobic004G187600 Sobic004G106500--Sobic008G078800 Sobic004G106500--Sobic002G325500 Sobic004G106500--Sobic004G037100 Sobic004G046400 Sobic004G046400 Sobic004G106500--Sobic004G046400 Sobic004G106500--Sobic002G165020 Sobic006G266800 Sobic006G266800 Sobic004G106500--Sobic006G266800 Sobic004G106500--Sobic007G005100 Sobic001G228900--Sobic001G035300 Sobic001G228900--Sobic002G325500 Sobic007G199101 Sobic007G199101 Sobic001G228900--Sobic007G199101 Sobic001G228900--Sobic002G417600 Sobic001G228900--Sobic008G019900 Sobic001G228900--Sobic007G022300 Sobic002G099100 Sobic002G099100 Sobic001G228900--Sobic002G099100 Sobic007G212250 Sobic007G212250 Sobic001G228900--Sobic007G212250 Sobic006G190150 Sobic006G190150 Sobic001G228900--Sobic006G190150 Sobic007G061600--Sobic007G005100 Sobic006G246500 Sobic006G246500 Sobic007G061600--Sobic006G246500 Sobic007G061600--Sobic002G424500 Sobic007G061600--Sobic002G325500 Sobic007G061600--Sobic005G048400 Sobic002G281100 Sobic002G281100 Sobic007G061600--Sobic002G281100 Sobic003G008200 Sobic003G008200 Sobic007G061600--Sobic003G008200 Sobic004G188100 Sobic004G188100 Sobic007G061600--Sobic004G188100 Sobic001G506500 Sobic001G506500 Sobic007G061600--Sobic001G506500 Sobic002G381200 Sobic002G381200 Sobic008G078800--Sobic002G381200 Sobic008G078800--Sobic004G187600 Sobic008G078800--Sobic010G032500 Sobic007G148100 Sobic007G148100 Sobic008G078800--Sobic007G148100 Sobic008G078800--Sobic002G417600 Sobic008G078800--Sobic007G005100 Sobic009G136800 Sobic009G136800 Sobic008G078800--Sobic009G136800 Sobic008G078800--Sobic004G106500 Sobic009G174300 Sobic009G174300 Sobic008G078800--Sobic009G174300 Sobic003G240400 Sobic003G240400 Sobic008G019900--Sobic003G240400 Sobic006G019700 Sobic006G019700 Sobic008G019900--Sobic006G019700 Sobic006G028500 Sobic006G028500 Sobic008G019900--Sobic006G028500 Sobic003G182200 Sobic003G182200 Sobic008G019900--Sobic003G182200 Sobic004G322800 Sobic004G322800 Sobic008G019900--Sobic004G322800 Sobic010G148800 Sobic010G148800 Sobic008G019900--Sobic010G148800 Sobic010G152400 Sobic010G152400 Sobic008G019900--Sobic010G152400 Sobic008G034900 Sobic008G034900 Sobic008G019900--Sobic008G034900 Sobic010G082000 Sobic010G082000 Sobic008G019900--Sobic010G082000 Sobic003G080600 Sobic003G080600 SobicK010100--Sobic003G080600 SobicK010100--Sobic002G165020 Sobic010G219800 Sobic010G219800 SobicK010100--Sobic010G219800 Sobic002G235800 Sobic002G235800 SobicK010100--Sobic002G235800 Sobic005G161900 Sobic005G161900 SobicK010100--Sobic005G161900 SobicK010100--Sobic004G106500 SobicK010100--Sobic002G424500 SobicK010100--Sobic002G325500 SobicK010100--Sobic006G246500
Octagon: transcription factors


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