Gene annotation
Transcriptome id Sobic.006G246500.3,Sobic.006G246500.4
Synonym Sb06g031195
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
protein kinase domain containing protein, expressed
UniProt A0A1B6PNQ0
Pfam PF07714
Panther DB PTHR27009 PTHR27009:SF22
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G34300 : lectin protein kinase family protein
RAP-DB (Rice) LOC_Os04g56130.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a009482 , Zm00025a009483 , Zm00025a009481 , Zm00025a057249 , Zm00025a057248 , Zm00025a054934
Brachypodium KQJ85080 , PNT62053 , KQJ85076 , KQJ85078 , KQJ85079
Barley HORVU2Hr1G017910.2 , HORVU2Hr1G017910.3 , HORVU2Hr1G017910.1 , HORVU2Hr1G017910.6 , HORVU2Hr1G017910.4 , HORVU2Hr1G017910.5 , HORVU2Hr1G111790.2 , HORVU2Hr1G111790.7 , HORVU2Hr1G111790.6 , HORVU7Hr1G034810.1 , HORVU7Hr1G034810.3 , HORVU7Hr1G034810.2 , HORVU4Hr1G008350.2 , HORVU4Hr1G008350.3 , HORVU4Hr1G008350.1 , HORVU4Hr1G008350.4 , HORVU2Hr1G111700.2 , HORVU2Hr1G111700.3 , HORVU2Hr1G111700.1 , HORVU2Hr1G111700.6 , HORVU2Hr1G111700.7 , HORVU2Hr1G111700.4 , HORVU2Hr1G111700.5 , HORVU6Hr1G095260.2 , HORVU6Hr1G095260.1 , HORVU2Hr1G111790.1 , HORVU2Hr1G111790.3 , HORVU2Hr1G111790.5 , HORVU2Hr1G111790.4 , HORVU1Hr1G054500.2 , HORVU4Hr1G031540.3 , HORVU4Hr1G031540.2 , HORVU4Hr1G031540.1
Wheat TraesCS2B02G531800 , TraesCS7B02G463700 , TraesCS2A02G503800 , TraesCS6B02G470600 , TraesCS2B02G532000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G061600 expressed protein -
2 Sobic.K010100 expressed protein -
3 Sobic.002G325500 ankyrin repeat family protein, putative, expressed -
4 Sobic.005G048400 NBS-LRR disease resistance protein, putative, expressed K13457: RPM1, disease resistance protein RPM1
5 Sobic.002G199200 No apical meristem protein, putative, expressed -
6 Sobic.003G141200 receptor-like protein kinase 5 precursor, putative, expressed K13415: protein brassinosteroid insensitive 1
7 Sobic.010G219800 vacuolar-sorting receptor precursor, putative, expressed -
8 Sobic.003G094700 glycosyltransferase protein, putative, expressed -
9 Sobic.001G326400 cytochrome P450, putative, expressed -
10 Sobic.001G277600 TKL_IRAK_DUF26-la.5 - DUF26 kinases have homology to DUF26 containing loci, expressed -
11 Sobic.001G398000 GCRP7 - Glycine and cysteine rich family protein precursor, expressed -
12 Sobic.002G424500 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
13 Sobic.009G100100 SAG20, putative, expressed -
14 Sobic.001G506700 exostosin family domain containing protein, expressed -
15 Sobic.001G471100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K10206: LL-diaminopimelate aminotransferase
16 Sobic.001G348200 expressed protein -
17 Sobic.004G304700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin receptor-type protein kinase, putative, expressed -
18 Sobic.004G106500 hydroquinone glucosyltransferase, putative, expressed -
19 Sobic.001G102000 - -
20 Sobic.009G081700 C4-dicarboxylate transporter/malic acid transport protein, expressed -


Gene co-expression network
sample Sobic006G246500 Sobic006G246500 Sobic007G061600 Sobic007G061600 Sobic006G246500--Sobic007G061600 SobicK010100 SobicK010100 Sobic006G246500--SobicK010100 Sobic002G325500 Sobic002G325500 Sobic006G246500--Sobic002G325500 Sobic005G048400 Sobic005G048400 Sobic006G246500--Sobic005G048400 Sobic002G199200 Sobic002G199200 Sobic006G246500--Sobic002G199200 Sobic003G141200 Sobic003G141200 Sobic006G246500--Sobic003G141200 Sobic010G219800 Sobic010G219800 Sobic006G246500--Sobic010G219800 Sobic003G094700 Sobic003G094700 Sobic006G246500--Sobic003G094700 Sobic001G326400 Sobic001G326400 Sobic006G246500--Sobic001G326400 Sobic007G005100 Sobic007G005100 Sobic007G061600--Sobic007G005100 Sobic007G061600--Sobic006G246500 Sobic002G424500 Sobic002G424500 Sobic007G061600--Sobic002G424500 Sobic007G061600--Sobic002G325500 Sobic007G061600--Sobic005G048400 Sobic002G281100 Sobic002G281100 Sobic007G061600--Sobic002G281100 Sobic003G008200 Sobic003G008200 Sobic007G061600--Sobic003G008200 Sobic004G188100 Sobic004G188100 Sobic007G061600--Sobic004G188100 Sobic001G506500 Sobic001G506500 Sobic007G061600--Sobic001G506500 Sobic003G080600 Sobic003G080600 SobicK010100--Sobic003G080600 Sobic002G165020 Sobic002G165020 SobicK010100--Sobic002G165020 SobicK010100--Sobic010G219800 Sobic002G235800 Sobic002G235800 SobicK010100--Sobic002G235800 Sobic005G161900 Sobic005G161900 SobicK010100--Sobic005G161900 Sobic004G106500 Sobic004G106500 SobicK010100--Sobic004G106500 SobicK010100--Sobic002G424500 SobicK010100--Sobic002G325500 SobicK010100--Sobic006G246500 Sobic001G035300 Sobic001G035300 Sobic002G325500--Sobic001G035300 Sobic002G325500--Sobic002G424500 Sobic002G325500--Sobic007G005100 Sobic002G325500--Sobic004G106500 Sobic001G228900 Sobic001G228900 Sobic002G325500--Sobic001G228900 Sobic002G325500--Sobic007G061600 Sobic008G078800 Sobic008G078800 Sobic002G325500--Sobic008G078800 Sobic008G019900 Sobic008G019900 Sobic002G325500--Sobic008G019900 Sobic002G325500--SobicK010100 Sobic001G070100 Sobic001G070100 Sobic005G048400--Sobic001G070100 Sobic005G048400--Sobic001G506500 Sobic001G277600 Sobic001G277600 Sobic005G048400--Sobic001G277600 Sobic003G176300 Sobic003G176300 Sobic005G048400--Sobic003G176300 Sobic003G240500 Sobic003G240500 Sobic005G048400--Sobic003G240500 Sobic010G082100 Sobic010G082100 Sobic005G048400--Sobic010G082100 Sobic004G308500 Sobic004G308500 Sobic005G048400--Sobic004G308500 Sobic001G506700 Sobic001G506700 Sobic005G048400--Sobic001G506700 Sobic005G110514 Sobic005G110514 Sobic005G048400--Sobic005G110514 Sobic002G199200--Sobic003G094700 Sobic010G129000 Sobic010G129000 Sobic002G199200--Sobic010G129000 Sobic001G102000 Sobic001G102000 Sobic002G199200--Sobic001G102000 Sobic009G081700 Sobic009G081700 Sobic002G199200--Sobic009G081700 Sobic002G273400 Sobic002G273400 Sobic002G199200--Sobic002G273400 Sobic001G348200 Sobic001G348200 Sobic002G199200--Sobic001G348200 Sobic002G199200--Sobic003G240500 Sobic005G057100 Sobic005G057100 Sobic002G199200--Sobic005G057100 Sobic005G079400 Sobic005G079400 Sobic002G199200--Sobic005G079400 Sobic003G141200--Sobic001G506700 Sobic001G238500 Sobic001G238500 Sobic003G141200--Sobic001G238500 Sobic010G256400 Sobic010G256400 Sobic003G141200--Sobic010G256400 Sobic005G104200 Sobic005G104200 Sobic003G141200--Sobic005G104200 Sobic002G238700 Sobic002G238700 Sobic003G141200--Sobic002G238700 Sobic009G015166 Sobic009G015166 Sobic003G141200--Sobic009G015166 Sobic006G009700 Sobic006G009700 Sobic003G141200--Sobic006G009700 Sobic004G126500 Sobic004G126500 Sobic003G141200--Sobic004G126500 Sobic005G066300 Sobic005G066300 Sobic003G141200--Sobic005G066300 Sobic010G219800--SobicK010100 Sobic010G219800--Sobic005G161900 Sobic010G035900 Sobic010G035900 Sobic010G219800--Sobic010G035900 Sobic010G219800--Sobic004G106500 Sobic009G162700 Sobic009G162700 Sobic010G219800--Sobic009G162700 Sobic007G148300 Sobic007G148300 Sobic010G219800--Sobic007G148300 Sobic005G110508 Sobic005G110508 Sobic010G219800--Sobic005G110508 Sobic005G091900 Sobic005G091900 Sobic010G219800--Sobic005G091900 Sobic010G219800--Sobic006G246500 Sobic003G094700--Sobic010G256400 Sobic002G019100 Sobic002G019100 Sobic003G094700--Sobic002G019100 Sobic004G322000 Sobic004G322000 Sobic003G094700--Sobic004G322000 Sobic003G094700--Sobic003G240500 Sobic003G094700--Sobic001G506700 Sobic006G205500 Sobic006G205500 Sobic003G094700--Sobic006G205500 Sobic006G117500 Sobic006G117500 Sobic003G094700--Sobic006G117500 Sobic003G094700--Sobic005G104200 Sobic001G506600 Sobic001G506600 Sobic003G094700--Sobic001G506600 Sobic003G020500 Sobic003G020500 Sobic001G326400--Sobic003G020500 Sobic001G218500 Sobic001G218500 Sobic001G326400--Sobic001G218500 Sobic005G219600 Sobic005G219600 Sobic001G326400--Sobic005G219600 Sobic001G326400--Sobic001G506700 Sobic001G326400--Sobic002G019100 Sobic007G120000 Sobic007G120000 Sobic001G326400--Sobic007G120000 Sobic002G166150 Sobic002G166150 Sobic001G326400--Sobic002G166150 Sobic003G079100 Sobic003G079100 Sobic001G326400--Sobic003G079100 Sobic001G326400--Sobic004G308500
Octagon: transcription factors


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