Gene annotation
Transcriptome id Sobic.001G398000.1,Sobic.001G398000.2,Sobic.001G398000.3
Synonym Sb01g037680
Functional annotation GCRP7 - Glycine and cysteine rich family protein precursor, expressed
UniProt C5WMJ1
Pfam -
Panther DB PTHR34366:SF4 PTHR34366 PTHR34366 PTHR34366:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G56320 : -
RAP-DB (Rice) LOC_Os03g19170.1 : GCRP7 - Glycine and cysteine rich family protein precursor, expressed
MaizeGDB (Corn) Zm00025a002108
Brachypodium PNT77547 , PNT77546
Barley HORVU4Hr1G054390.2 , HORVU4Hr1G054390.1
Wheat TraesCS4A02G118800 , TraesCS4D02G187000 , TraesCS4B02G185700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G281100 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.002G356500 expressed protein -
3 Sobic.003G079466 - -
4 Sobic.007G108700 expressed protein -
5 Sobic.002G334100 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
6 Sobic.010G192700 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
7 Sobic.009G150600 expressed protein -
8 Sobic.004G341600 O-methyltransferase, putative, expressed -
9 Sobic.002G215866 - -
10 Sobic.006G246500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
11 Sobic.010G130400 SAM dependent carboxyl methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
12 Sobic.009G251700 DNA ligase, putative, expressed -
13 Sobic.004G106500 hydroquinone glucosyltransferase, putative, expressed -
14 Sobic.004G041600 homeobox associated leucine zipper, putative, expressed -
15 Sobic.003G008200 thioesterase family protein, putative, expressed -
16 Sobic.008G137300 RALFL43 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
17 Sobic.003G240500 glycosyl transferase, group 1 domain containing protein, expressed -
18 Sobic.004G081501 - -
19 Sobic.002G153600 expressed protein -
20 Sobic.010G267100 zinc finger family protein, putative, expressed -


Gene co-expression network
sample Sobic001G398000 Sobic001G398000 Sobic002G281100 Sobic002G281100 Sobic001G398000--Sobic002G281100 Sobic002G356500 Sobic002G356500 Sobic001G398000--Sobic002G356500 Sobic003G079466 Sobic003G079466 Sobic001G398000--Sobic003G079466 Sobic007G108700 Sobic007G108700 Sobic001G398000--Sobic007G108700 Sobic002G334100 Sobic002G334100 Sobic001G398000--Sobic002G334100 Sobic010G192700 Sobic010G192700 Sobic001G398000--Sobic010G192700 Sobic009G150600 Sobic009G150600 Sobic001G398000--Sobic009G150600 Sobic004G341600 Sobic004G341600 Sobic001G398000--Sobic004G341600 Sobic002G215866 Sobic002G215866 Sobic001G398000--Sobic002G215866 Sobic006G250400 Sobic006G250400 Sobic002G281100--Sobic006G250400 Sobic001G277600 Sobic001G277600 Sobic002G281100--Sobic001G277600 Sobic002G334200 Sobic002G334200 Sobic002G281100--Sobic002G334200 Sobic002G281100--Sobic002G356500 Sobic009G100100 Sobic009G100100 Sobic002G281100--Sobic009G100100 Sobic008G137300 Sobic008G137300 Sobic002G281100--Sobic008G137300 Sobic010G130400 Sobic010G130400 Sobic002G281100--Sobic010G130400 Sobic001G499701 Sobic001G499701 Sobic002G281100--Sobic001G499701 Sobic003G240500 Sobic003G240500 Sobic002G281100--Sobic003G240500 Sobic009G183800 Sobic009G183800 Sobic002G356500--Sobic009G183800 Sobic002G356500--Sobic007G108700 Sobic005G228400 Sobic005G228400 Sobic002G356500--Sobic005G228400 Sobic008G019900 Sobic008G019900 Sobic002G356500--Sobic008G019900 Sobic002G356500--Sobic002G281100 Sobic001G062500 Sobic001G062500 Sobic002G356500--Sobic001G062500 Sobic002G218800 Sobic002G218800 Sobic002G356500--Sobic002G218800 Sobic004G046400 Sobic004G046400 Sobic002G356500--Sobic004G046400 Sobic009G035900 Sobic009G035900 Sobic002G356500--Sobic009G035900 Sobic003G225000 Sobic003G225000 Sobic003G079466--Sobic003G225000 Sobic007G079500 Sobic007G079500 Sobic003G079466--Sobic007G079500 Sobic010G234100 Sobic010G234100 Sobic003G079466--Sobic010G234100 Sobic003G079466--Sobic002G281100 Sobic001G052500 Sobic001G052500 Sobic003G079466--Sobic001G052500 Sobic009G158200 Sobic009G158200 Sobic003G079466--Sobic009G158200 Sobic007G122866 Sobic007G122866 Sobic003G079466--Sobic007G122866 Sobic004G287000 Sobic004G287000 Sobic003G079466--Sobic004G287000 Sobic003G223600 Sobic003G223600 Sobic003G079466--Sobic003G223600 Sobic004G011100 Sobic004G011100 Sobic007G108700--Sobic004G011100 Sobic003G139300 Sobic003G139300 Sobic007G108700--Sobic003G139300 Sobic003G368600 Sobic003G368600 Sobic007G108700--Sobic003G368600 Sobic001G021900 Sobic001G021900 Sobic007G108700--Sobic001G021900 Sobic007G108700--Sobic002G356500 Sobic001G075300 Sobic001G075300 Sobic007G108700--Sobic001G075300 Sobic002G235500 Sobic002G235500 Sobic007G108700--Sobic002G235500 Sobic010G204200 Sobic010G204200 Sobic007G108700--Sobic010G204200 Sobic003G024900 Sobic003G024900 Sobic007G108700--Sobic003G024900 Sobic003G315166 Sobic003G315166 Sobic002G334100--Sobic003G315166 Sobic002G334100--Sobic002G334200 Sobic009G251700 Sobic009G251700 Sobic002G334100--Sobic009G251700 Sobic010G019600 Sobic010G019600 Sobic002G334100--Sobic010G019600 Sobic007G055900 Sobic007G055900 Sobic002G334100--Sobic007G055900 Sobic002G334100--Sobic006G250400 Sobic004G317401 Sobic004G317401 Sobic002G334100--Sobic004G317401 Sobic010G082100 Sobic010G082100 Sobic002G334100--Sobic010G082100 Sobic004G202900 Sobic004G202900 Sobic002G334100--Sobic004G202900 Sobic010G229300 Sobic010G229300 Sobic010G192700--Sobic010G229300 Sobic003G186066 Sobic003G186066 Sobic010G192700--Sobic003G186066 Sobic003G120900 Sobic003G120900 Sobic010G192700--Sobic003G120900 Sobic002G153600 Sobic002G153600 Sobic010G192700--Sobic002G153600 Sobic003G348900 Sobic003G348900 Sobic010G192700--Sobic003G348900 Sobic006G232100 Sobic006G232100 Sobic010G192700--Sobic006G232100 Sobic006G112000 Sobic006G112000 Sobic010G192700--Sobic006G112000 Sobic003G008200 Sobic003G008200 Sobic010G192700--Sobic003G008200 Sobic001G097800 Sobic001G097800 Sobic010G192700--Sobic001G097800 Sobic007G021700 Sobic007G021700 Sobic009G150600--Sobic007G021700 Sobic007G021800 Sobic007G021800 Sobic009G150600--Sobic007G021800 Sobic004G038700 Sobic004G038700 Sobic009G150600--Sobic004G038700 Sobic005G010100 Sobic005G010100 Sobic009G150600--Sobic005G010100 Sobic009G150600--Sobic001G075300 Sobic008G011700 Sobic008G011700 Sobic009G150600--Sobic008G011700 Sobic010G170150 Sobic010G170150 Sobic009G150600--Sobic010G170150 Sobic003G228600 Sobic003G228600 Sobic009G150600--Sobic003G228600 Sobic009G150600--Sobic004G011100 Sobic004G341600--Sobic004G202900 Sobic004G341600--Sobic006G232100 Sobic004G341600--Sobic002G153600 Sobic002G075300 Sobic002G075300 Sobic004G341600--Sobic002G075300 Sobic003G015700 Sobic003G015700 Sobic004G341600--Sobic003G015700 Sobic003G363600 Sobic003G363600 Sobic004G341600--Sobic003G363600 Sobic008G174850 Sobic008G174850 Sobic004G341600--Sobic008G174850 Sobic002G075100 Sobic002G075100 Sobic004G341600--Sobic002G075100 Sobic003G373050 Sobic003G373050 Sobic004G341600--Sobic003G373050 Sobic004G279900 Sobic004G279900 Sobic002G215866--Sobic004G279900 Sobic002G215866--Sobic003G008200 Sobic008G123700 Sobic008G123700 Sobic002G215866--Sobic008G123700 Sobic004G208201 Sobic004G208201 Sobic002G215866--Sobic004G208201 Sobic006G205800 Sobic006G205800 Sobic002G215866--Sobic006G205800 Sobic004G233100 Sobic004G233100 Sobic002G215866--Sobic004G233100 Sobic009G206900 Sobic009G206900 Sobic002G215866--Sobic009G206900 Sobic004G061100 Sobic004G061100 Sobic002G215866--Sobic004G061100 Sobic001G476201 Sobic001G476201 Sobic002G215866--Sobic001G476201
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.