Gene annotation
Transcriptome id Sobic.002G334100.1
Synonym Sb02g036000, CSLD5, SOS6, ATCSLD5
Functional annotation CSLF3 - cellulose synthase-like family F
beta1,3
1,4 glucan synthase, expressed
UniProt A0A1B6QEV1
Pfam PF03552
Panther DB PTHR13301 PTHR13301:SF44
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016760; cellulose synthase (UDP-forming) activity GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT1G02730 : cellulose synthase-like D5
RAP-DB (Rice) LOC_Os07g36750.1 : CSLF3 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed
MaizeGDB (Corn) Zm00025a014885 , Zm00025a048344
Brachypodium KQK15830
Barley HORVU2Hr1G042350.8 , HORVU2Hr1G042350.9 , HORVU2Hr1G042350.2 , HORVU2Hr1G042350.3 , HORVU2Hr1G042350.1 , HORVU2Hr1G042350.7 , HORVU2Hr1G042350.4 , HORVU2Hr1G042350.5
Wheat TraesCS2D02G217000 , TraesCS2A02G210400 , TraesCS2B02G236500 , TraesCS2B02G236400 , TraesCS2A02G210300 , TraesCS2D02G217100 , TraesCS2D02G217100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G315166 - K13024: PPIP5K, inositol-hexakisphosphate/diphosphoinositol-pentakisphosphate 1-kinase
2 Sobic.002G334200 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
3 Sobic.009G251700 DNA ligase, putative, expressed -
4 Sobic.010G019600 cytochrome P450 86A1, putative, expressed -
5 Sobic.007G055900 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
6 Sobic.006G250400 expressed protein -
7 Sobic.004G317401 - -
8 Sobic.010G082100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
9 Sobic.004G202900 Ser/Thr protein phosphatase family protein, putative, expressed -
10 Sobic.010G013000 interacting protein of DMI3, putative, expressed -
11 Sobic.008G137300 RALFL43 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
12 Sobic.002G281100 plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.001G526500 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
14 Sobic.006G232100 expressed protein -
15 Sobic.003G240500 glycosyl transferase, group 1 domain containing protein, expressed -
16 Sobic.007G042600 "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
17 Sobic.001G070100 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR1 - Auxin-responsive SAUR gene family member, expressed -
18 Sobic.001G506500 exostosin family domain containing protein, expressed -
19 Sobic.002G321200 vrga1, putative, expressed -
20 Sobic.003G176300 - -


Gene co-expression network
sample Sobic002G334100 Sobic002G334100 Sobic003G315166 Sobic003G315166 Sobic002G334100--Sobic003G315166 Sobic002G334200 Sobic002G334200 Sobic002G334100--Sobic002G334200 Sobic009G251700 Sobic009G251700 Sobic002G334100--Sobic009G251700 Sobic010G019600 Sobic010G019600 Sobic002G334100--Sobic010G019600 Sobic007G055900 Sobic007G055900 Sobic002G334100--Sobic007G055900 Sobic006G250400 Sobic006G250400 Sobic002G334100--Sobic006G250400 Sobic004G317401 Sobic004G317401 Sobic002G334100--Sobic004G317401 Sobic010G082100 Sobic010G082100 Sobic002G334100--Sobic010G082100 Sobic004G202900 Sobic004G202900 Sobic002G334100--Sobic004G202900 Sobic003G315166--Sobic007G055900 Sobic003G315166--Sobic002G334100 Sobic007G042600 Sobic007G042600 Sobic003G315166--Sobic007G042600 Sobic006G232100 Sobic006G232100 Sobic003G315166--Sobic006G232100 Sobic003G315166--Sobic010G019600 Sobic010G013000 Sobic010G013000 Sobic003G315166--Sobic010G013000 Sobic001G070100 Sobic001G070100 Sobic003G315166--Sobic001G070100 Sobic002G348300 Sobic002G348300 Sobic003G315166--Sobic002G348300 Sobic004G187600 Sobic004G187600 Sobic003G315166--Sobic004G187600 Sobic001G187300 Sobic001G187300 Sobic002G334200--Sobic001G187300 Sobic001G507100 Sobic001G507100 Sobic002G334200--Sobic001G507100 Sobic002G080200 Sobic002G080200 Sobic002G334200--Sobic002G080200 Sobic002G028632 Sobic002G028632 Sobic002G334200--Sobic002G028632 Sobic003G280000 Sobic003G280000 Sobic002G334200--Sobic003G280000 Sobic003G390500 Sobic003G390500 Sobic002G334200--Sobic003G390500 Sobic004G029300 Sobic004G029300 Sobic002G334200--Sobic004G029300 Sobic001G014700 Sobic001G014700 Sobic002G334200--Sobic001G014700 Sobic001G259100 Sobic001G259100 Sobic002G334200--Sobic001G259100 Sobic009G251700--Sobic002G334100 Sobic002G321200 Sobic002G321200 Sobic009G251700--Sobic002G321200 Sobic008G174850 Sobic008G174850 Sobic009G251700--Sobic008G174850 Sobic003G015700 Sobic003G015700 Sobic009G251700--Sobic003G015700 Sobic002G075400 Sobic002G075400 Sobic009G251700--Sobic002G075400 Sobic004G341600 Sobic004G341600 Sobic009G251700--Sobic004G341600 Sobic007G132300 Sobic007G132300 Sobic009G251700--Sobic007G132300 Sobic005G075700 Sobic005G075700 Sobic009G251700--Sobic005G075700 Sobic004G259800 Sobic004G259800 Sobic009G251700--Sobic004G259800 Sobic010G019600--Sobic002G334200 Sobic004G188100 Sobic004G188100 Sobic010G019600--Sobic004G188100 Sobic010G019600--Sobic010G082100 Sobic010G019600--Sobic004G317401 Sobic001G506500 Sobic001G506500 Sobic010G019600--Sobic001G506500 Sobic010G019600--Sobic003G390500 Sobic010G019600--Sobic002G334100 Sobic010G019600--Sobic001G070100 Sobic003G363600 Sobic003G363600 Sobic010G019600--Sobic003G363600 Sobic007G055900--Sobic003G315166 Sobic007G055900--Sobic002G348300 Sobic007G055900--Sobic002G334100 Sobic007G055900--Sobic004G188100 Sobic008G078800 Sobic008G078800 Sobic007G055900--Sobic008G078800 Sobic001G292100 Sobic001G292100 Sobic007G055900--Sobic001G292100 Sobic007G055900--Sobic007G042600 Sobic007G055900--Sobic010G013000 Sobic007G055900--Sobic004G187600 Sobic002G281100 Sobic002G281100 Sobic006G250400--Sobic002G281100 Sobic010G241700 Sobic010G241700 Sobic006G250400--Sobic010G241700 Sobic004G348500 Sobic004G348500 Sobic006G250400--Sobic004G348500 Sobic001G277600 Sobic001G277600 Sobic006G250400--Sobic001G277600 Sobic006G250400--Sobic002G334100 Sobic005G048400 Sobic005G048400 Sobic006G250400--Sobic005G048400 Sobic010G083400 Sobic010G083400 Sobic006G250400--Sobic010G083400 Sobic003G240500 Sobic003G240500 Sobic006G250400--Sobic003G240500 Sobic010G204200 Sobic010G204200 Sobic006G250400--Sobic010G204200 Sobic007G191400 Sobic007G191400 Sobic004G317401--Sobic007G191400 Sobic004G317401--Sobic004G202900 Sobic009G240100 Sobic009G240100 Sobic004G317401--Sobic009G240100 Sobic007G176300 Sobic007G176300 Sobic004G317401--Sobic007G176300 Sobic003G059600 Sobic003G059600 Sobic004G317401--Sobic003G059600 Sobic004G266100 Sobic004G266100 Sobic004G317401--Sobic004G266100 Sobic005G227900 Sobic005G227900 Sobic004G317401--Sobic005G227900 Sobic002G373700 Sobic002G373700 Sobic004G317401--Sobic002G373700 Sobic004G317401--Sobic010G019600 Sobic010G082100--Sobic003G240500 Sobic010G082100--Sobic001G506500 Sobic007G007300 Sobic007G007300 Sobic010G082100--Sobic007G007300 Sobic005G110514 Sobic005G110514 Sobic010G082100--Sobic005G110514 Sobic009G106100 Sobic009G106100 Sobic010G082100--Sobic009G106100 Sobic006G266800 Sobic006G266800 Sobic010G082100--Sobic006G266800 Sobic004G308500 Sobic004G308500 Sobic010G082100--Sobic004G308500 Sobic001G274400 Sobic001G274400 Sobic010G082100--Sobic001G274400 Sobic010G170150 Sobic010G170150 Sobic010G082100--Sobic010G170150 Sobic004G202900--Sobic004G317401 Sobic004G202900--Sobic004G341600 Sobic004G202900--Sobic004G266100 Sobic004G202900--Sobic003G363600 Sobic004G202900--Sobic006G232100 Sobic007G183500 Sobic007G183500 Sobic004G202900--Sobic007G183500 Sobic006G116200 Sobic006G116200 Sobic004G202900--Sobic006G116200 Sobic004G202900--Sobic003G059600 Sobic004G202900--Sobic002G321200
Octagon: transcription factors


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