Gene annotation
Transcriptome id Sobic.010G013000.1,Sobic.010G013000.2
Synonym Sb10g001290
Functional annotation interacting protein of DMI3, putative, expressed
UniProt C5Z2U3
Pfam -
Panther DB PTHR36890
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g02520.1 : interacting protein of DMI3, putative, expressed
MaizeGDB (Corn) Zm00025a041307 , Zm00025a050250
Brachypodium KQK19803 , KQK19805 , KQK19804 , PNT76622
Barley HORVU7Hr1G008420.9 , HORVU7Hr1G008420.8 , HORVU7Hr1G008420.3 , HORVU7Hr1G008420.2 , HORVU7Hr1G008420.1 , HORVU7Hr1G008420.7 , HORVU7Hr1G008420.6 , HORVU7Hr1G008420.5 , HORVU7Hr1G008420.4
Wheat TraesCS4A02G434100 , TraesCS7A02G048700 , TraesCS7D02G043100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G010500 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.007G186500 resistance protein, putative, expressed -
3 Sobic.004G003100 nodulin, putative, expressed -
4 Sobic.010G268700 expansin precursor, putative, expressed -
5 Sobic.001G301000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
6 Sobic.002G025500 expressed protein -
7 Sobic.002G028632 - -
8 Sobic.003G357700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Laccase LAC7 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
9 Sobic.001G231800 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
10 Sobic.005G216400 plant protein of unknown function domain containing protein, expressed -
11 Sobic.005G206000 dirigent, putative, expressed -
12 Sobic.007G177400 OsFBX306 - F-box domain containing protein, expressed -
13 Sobic.004G346300 expressed protein -
14 Sobic.005G060200 cytochrome P450, putative, expressed -
15 Sobic.010G245400 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.009G095800 DUF623 domain containing protein, expressed -
17 Sobic.003G007400 expressed protein -
18 Sobic.007G111800 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
19 Sobic.004G121600 expansin precursor, putative, expressed -
20 Sobic.007G042600 "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1


Gene co-expression network
sample Sobic010G013000 Sobic010G013000 Sobic008G010500 Sobic008G010500 Sobic010G013000--Sobic008G010500 Sobic007G186500 Sobic007G186500 Sobic010G013000--Sobic007G186500 Sobic004G003100 Sobic004G003100 Sobic010G013000--Sobic004G003100 Sobic010G268700 Sobic010G268700 Sobic010G013000--Sobic010G268700 Sobic001G301000 Sobic001G301000 Sobic010G013000--Sobic001G301000 Sobic002G025500 Sobic002G025500 Sobic010G013000--Sobic002G025500 Sobic002G028632 Sobic002G028632 Sobic010G013000--Sobic002G028632 Sobic003G357700 Sobic003G357700 Sobic010G013000--Sobic003G357700 Sobic001G231800 Sobic001G231800 Sobic010G013000--Sobic001G231800 Sobic008G010500--Sobic001G301000 Sobic008G010500--Sobic001G231800 Sobic004G121600 Sobic004G121600 Sobic008G010500--Sobic004G121600 Sobic008G010500--Sobic010G268700 Sobic005G119900 Sobic005G119900 Sobic008G010500--Sobic005G119900 Sobic005G206000 Sobic005G206000 Sobic008G010500--Sobic005G206000 Sobic003G441700 Sobic003G441700 Sobic008G010500--Sobic003G441700 Sobic010G245400 Sobic010G245400 Sobic008G010500--Sobic010G245400 Sobic003G053200 Sobic003G053200 Sobic008G010500--Sobic003G053200 Sobic007G186500--Sobic004G121600 Sobic007G186500--Sobic010G268700 Sobic006G097900 Sobic006G097900 Sobic007G186500--Sobic006G097900 Sobic005G216600 Sobic005G216600 Sobic007G186500--Sobic005G216600 Sobic003G161400 Sobic003G161400 Sobic007G186500--Sobic003G161400 Sobic007G186500--Sobic001G301000 Sobic007G186500--Sobic008G010500 Sobic003G007400 Sobic003G007400 Sobic007G186500--Sobic003G007400 Sobic005G182900 Sobic005G182900 Sobic007G186500--Sobic005G182900 Sobic005G110514 Sobic005G110514 Sobic004G003100--Sobic005G110514 Sobic009G233100 Sobic009G233100 Sobic004G003100--Sobic009G233100 Sobic004G003100--Sobic003G007400 Sobic004G003100--Sobic010G013000 Sobic004G003100--Sobic005G206000 Sobic004G308500 Sobic004G308500 Sobic004G003100--Sobic004G308500 Sobic009G095800 Sobic009G095800 Sobic004G003100--Sobic009G095800 Sobic004G003100--Sobic001G301000 Sobic004G003100--Sobic007G186500 Sobic010G268700--Sobic006G097900 Sobic005G060200 Sobic005G060200 Sobic010G268700--Sobic005G060200 Sobic010G268700--Sobic001G301000 Sobic010G268700--Sobic005G216600 Sobic001G293100 Sobic001G293100 Sobic010G268700--Sobic001G293100 Sobic005G197500 Sobic005G197500 Sobic010G268700--Sobic005G197500 Sobic010G268700--Sobic008G010500 Sobic004G002901 Sobic004G002901 Sobic010G268700--Sobic004G002901 Sobic010G268700--Sobic003G161400 Sobic001G301000--Sobic001G231800 Sobic001G301000--Sobic008G010500 Sobic001G301000--Sobic004G121600 Sobic001G301000--Sobic003G441700 Sobic001G301000--Sobic005G119900 Sobic001G301000--Sobic003G053200 Sobic001G301000--Sobic010G268700 Sobic001G301000--Sobic010G245400 Sobic001G301000--Sobic006G097900 Sobic003G443700 Sobic003G443700 Sobic002G025500--Sobic003G443700 Sobic004G346300 Sobic004G346300 Sobic002G025500--Sobic004G346300 Sobic002G025500--Sobic003G357700 Sobic002G025500--Sobic010G268700 Sobic002G366200 Sobic002G366200 Sobic002G025500--Sobic002G366200 Sobic002G025500--Sobic005G060200 Sobic005G216400 Sobic005G216400 Sobic002G025500--Sobic005G216400 Sobic007G177400 Sobic007G177400 Sobic002G025500--Sobic007G177400 Sobic007G111800 Sobic007G111800 Sobic002G025500--Sobic007G111800 Sobic002G028632--Sobic002G366200 Sobic002G028632--Sobic003G357700 Sobic002G028632--Sobic003G443700 Sobic002G028632--Sobic007G177400 Sobic002G028632--Sobic005G216400 Sobic002G028632--Sobic004G346300 Sobic002G028632--Sobic002G025500 Sobic007G064500 Sobic007G064500 Sobic002G028632--Sobic007G064500 Sobic002G178101 Sobic002G178101 Sobic002G028632--Sobic002G178101 Sobic003G357700--Sobic005G216400 Sobic003G357700--Sobic003G443700 Sobic003G357700--Sobic004G346300 Sobic003G357700--Sobic007G177400 Sobic003G357700--Sobic005G119900 Sobic003G357700--Sobic002G366200 Sobic007G212000 Sobic007G212000 Sobic003G357700--Sobic007G212000 Sobic003G357700--Sobic002G178101 Sobic008G105800 Sobic008G105800 Sobic003G357700--Sobic008G105800 Sobic001G231800--Sobic001G301000 Sobic001G231800--Sobic008G010500 Sobic001G231800--Sobic010G245400 Sobic001G231800--Sobic005G119900 Sobic001G231800--Sobic003G441700 Sobic001G231800--Sobic004G121600 Sobic001G231800--Sobic003G053200 Sobic001G231800--Sobic010G268700 Sobic001G231800--Sobic003G357700
Octagon: transcription factors


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