Gene annotation
Transcriptome id Sobic.006G250400.1
Synonym Sb06g031550
Functional annotation expressed protein
UniProt C5Y9L1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g56490.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU2Hr1G111120.1
Wheat -
Populus -


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cDNA sequences
Sobic.006G250400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G281100 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.010G241700 - -
3 Sobic.004G348500 RING-H2 finger protein ATL5G, putative, expressed -
4 Sobic.001G277600 TKL_IRAK_DUF26-la.5 - DUF26 kinases have homology to DUF26 containing loci, expressed -
5 Sobic.002G334100 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
6 Sobic.005G048400 NBS-LRR disease resistance protein, putative, expressed K13457: RPM1, disease resistance protein RPM1
7 Sobic.010G083400 gibberellin receptor GID1L2, putative, expressed -
8 Sobic.003G240500 glycosyl transferase, group 1 domain containing protein, expressed -
9 Sobic.010G204200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 71D7, putative, expressed -
10 Sobic.002G334200 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
11 Sobic.010G082100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
12 Sobic.001G506500 exostosin family domain containing protein, expressed -
13 Sobic.005G110514 - -
14 Sobic.003G176300 - -
15 Sobic.009G150600 expressed protein -
16 Sobic.004G003100 nodulin, putative, expressed -
17 Sobic.001G506800 exostosin family domain containing protein, expressed -
18 Sobic.010G214300 - -
19 Sobic.004G116800 harpin-induced protein 1 domain containing protein, expressed -
20 Sobic.004G139300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450 71D10, putative, expressed -


Gene co-expression network
sample Sobic006G250400 Sobic006G250400 Sobic002G281100 Sobic002G281100 Sobic006G250400--Sobic002G281100 Sobic010G241700 Sobic010G241700 Sobic006G250400--Sobic010G241700 Sobic004G348500 Sobic004G348500 Sobic006G250400--Sobic004G348500 Sobic001G277600 Sobic001G277600 Sobic006G250400--Sobic001G277600 Sobic002G334100 Sobic002G334100 Sobic006G250400--Sobic002G334100 Sobic005G048400 Sobic005G048400 Sobic006G250400--Sobic005G048400 Sobic010G083400 Sobic010G083400 Sobic006G250400--Sobic010G083400 Sobic003G240500 Sobic003G240500 Sobic006G250400--Sobic003G240500 Sobic010G204200 Sobic010G204200 Sobic006G250400--Sobic010G204200 Sobic002G281100--Sobic006G250400 Sobic002G281100--Sobic001G277600 Sobic002G334200 Sobic002G334200 Sobic002G281100--Sobic002G334200 Sobic002G356500 Sobic002G356500 Sobic002G281100--Sobic002G356500 Sobic009G100100 Sobic009G100100 Sobic002G281100--Sobic009G100100 Sobic008G137300 Sobic008G137300 Sobic002G281100--Sobic008G137300 Sobic010G130400 Sobic010G130400 Sobic002G281100--Sobic010G130400 Sobic001G499701 Sobic001G499701 Sobic002G281100--Sobic001G499701 Sobic002G281100--Sobic003G240500 Sobic006G256900 Sobic006G256900 Sobic010G241700--Sobic006G256900 Sobic001G438200 Sobic001G438200 Sobic010G241700--Sobic001G438200 Sobic001G062500 Sobic001G062500 Sobic010G241700--Sobic001G062500 Sobic010G148800 Sobic010G148800 Sobic010G241700--Sobic010G148800 Sobic007G100700 Sobic007G100700 Sobic010G241700--Sobic007G100700 Sobic001G058300 Sobic001G058300 Sobic010G241700--Sobic001G058300 Sobic003G319400 Sobic003G319400 Sobic010G241700--Sobic003G319400 Sobic006G106900 Sobic006G106900 Sobic010G241700--Sobic006G106900 Sobic009G181600 Sobic009G181600 Sobic010G241700--Sobic009G181600 Sobic006G087300 Sobic006G087300 Sobic004G348500--Sobic006G087300 Sobic006G019700 Sobic006G019700 Sobic004G348500--Sobic006G019700 Sobic001G149400 Sobic001G149400 Sobic004G348500--Sobic001G149400 Sobic007G090472 Sobic007G090472 Sobic004G348500--Sobic007G090472 Sobic006G135300 Sobic006G135300 Sobic004G348500--Sobic006G135300 Sobic004G348500--Sobic006G250400 Sobic003G390500 Sobic003G390500 Sobic004G348500--Sobic003G390500 Sobic001G357700 Sobic001G357700 Sobic004G348500--Sobic001G357700 Sobic004G271800 Sobic004G271800 Sobic004G348500--Sobic004G271800 Sobic005G110514 Sobic005G110514 Sobic001G277600--Sobic005G110514 Sobic001G277600--Sobic005G048400 Sobic001G277600--Sobic003G240500 Sobic001G277600--Sobic010G241700 Sobic001G326400 Sobic001G326400 Sobic001G277600--Sobic001G326400 Sobic004G308500 Sobic004G308500 Sobic001G277600--Sobic004G308500 Sobic006G133200 Sobic006G133200 Sobic001G277600--Sobic006G133200 Sobic004G003100 Sobic004G003100 Sobic001G277600--Sobic004G003100 Sobic001G506500 Sobic001G506500 Sobic001G277600--Sobic001G506500 Sobic003G315166 Sobic003G315166 Sobic002G334100--Sobic003G315166 Sobic002G334100--Sobic002G334200 Sobic009G251700 Sobic009G251700 Sobic002G334100--Sobic009G251700 Sobic010G019600 Sobic010G019600 Sobic002G334100--Sobic010G019600 Sobic007G055900 Sobic007G055900 Sobic002G334100--Sobic007G055900 Sobic002G334100--Sobic006G250400 Sobic004G317401 Sobic004G317401 Sobic002G334100--Sobic004G317401 Sobic010G082100 Sobic010G082100 Sobic002G334100--Sobic010G082100 Sobic004G202900 Sobic004G202900 Sobic002G334100--Sobic004G202900 Sobic001G070100 Sobic001G070100 Sobic005G048400--Sobic001G070100 Sobic005G048400--Sobic001G506500 Sobic005G048400--Sobic001G277600 Sobic003G176300 Sobic003G176300 Sobic005G048400--Sobic003G176300 Sobic005G048400--Sobic003G240500 Sobic005G048400--Sobic010G082100 Sobic005G048400--Sobic004G308500 Sobic001G506700 Sobic001G506700 Sobic005G048400--Sobic001G506700 Sobic005G048400--Sobic005G110514 Sobic002G244300 Sobic002G244300 Sobic010G083400--Sobic002G244300 Sobic002G368300 Sobic002G368300 Sobic010G083400--Sobic002G368300 Sobic002G154600 Sobic002G154600 Sobic010G083400--Sobic002G154600 Sobic009G088900 Sobic009G088900 Sobic010G083400--Sobic009G088900 Sobic007G159450 Sobic007G159450 Sobic010G083400--Sobic007G159450 Sobic002G365801 Sobic002G365801 Sobic010G083400--Sobic002G365801 Sobic008G055100 Sobic008G055100 Sobic010G083400--Sobic008G055100 Sobic004G071000 Sobic004G071000 Sobic010G083400--Sobic004G071000 Sobic003G121100 Sobic003G121100 Sobic010G083400--Sobic003G121100 Sobic003G240500--Sobic010G082100 Sobic007G007300 Sobic007G007300 Sobic003G240500--Sobic007G007300 Sobic006G266800 Sobic006G266800 Sobic003G240500--Sobic006G266800 Sobic003G240500--Sobic005G110514 Sobic003G240500--Sobic004G308500 Sobic004G322000 Sobic004G322000 Sobic003G240500--Sobic004G322000 Sobic003G240500--Sobic001G506500 Sobic002G166150 Sobic002G166150 Sobic003G240500--Sobic002G166150 Sobic003G240500--Sobic001G506700 Sobic010G214300 Sobic010G214300 Sobic010G204200--Sobic010G214300 Sobic001G506800 Sobic001G506800 Sobic010G204200--Sobic001G506800 Sobic010G113100 Sobic010G113100 Sobic010G204200--Sobic010G113100 Sobic010G204200--Sobic007G100700 Sobic008G164450 Sobic008G164450 Sobic010G204200--Sobic008G164450 Sobic008G011700 Sobic008G011700 Sobic010G204200--Sobic008G011700 Sobic001G209300 Sobic001G209300 Sobic010G204200--Sobic001G209300 Sobic007G047500 Sobic007G047500 Sobic010G204200--Sobic007G047500 Sobic010G204200--Sobic009G181600
Octagon: transcription factors


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