Gene annotation
Transcriptome id Sobic.002G334200.1
Synonym Sb02g036010, CSLD5, SOS6, ATCSLD5
Functional annotation CSLF3 - cellulose synthase-like family F
beta1,3
1,4 glucan synthase, expressed
UniProt C5XAX7
Pfam PF03552
Panther DB PTHR13301 PTHR13301:SF44
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016760; cellulose synthase (UDP-forming) activity GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT1G02730 : cellulose synthase-like D5
RAP-DB (Rice) LOC_Os07g36750.1 : CSLF3 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed
MaizeGDB (Corn) Zm00025a014885 , Zm00025a048344
Brachypodium KQK15830
Barley HORVU2Hr1G042370.10 , HORVU2Hr1G042370.11 , HORVU2Hr1G042370.8 , HORVU2Hr1G042370.9 , HORVU2Hr1G042370.4 , HORVU2Hr1G042370.5 , HORVU2Hr1G042370.6 , HORVU2Hr1G042370.7 , HORVU2Hr1G042370.1 , HORVU2Hr1G042370.2 , HORVU2Hr1G042370.3 , HORVU2Hr1G042370.12 , HORVU7Hr1G121040.6 , HORVU7Hr1G121040.5 , HORVU7Hr1G121040.4 , HORVU7Hr1G121040.3 , HORVU7Hr1G121040.2 , HORVU7Hr1G121040.1 , HORVU2Hr1G042350.8 , HORVU2Hr1G042350.9 , HORVU2Hr1G042350.2 , HORVU2Hr1G042350.3 , HORVU2Hr1G042350.1 , HORVU2Hr1G042350.7 , HORVU2Hr1G042350.4 , HORVU2Hr1G042350.5
Wheat TraesCS7D02G555000 , TraesCS2D02G217000 , TraesCS2B02G236500 , TraesCS2A02G210300 , TraesCS7A02G555600 , TraesCS2B02G236400 , TraesCS2B02G626300 , TraesCS2D02G575100 , TraesCS2A02G565500 , TraesCS7B02G480200 , TraesCS2D02G217100 , TraesCS2D02G217100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G187300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@sulfate transporter, putative, expressed -
2 Sobic.001G507100 dirigent, putative, expressed -
3 Sobic.002G080200 receptor protein kinase, putative, expressed -
4 Sobic.002G028632 - -
5 Sobic.003G280000 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.003G390500 POEI32 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
7 Sobic.004G029300 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
8 Sobic.001G014700 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
9 Sobic.001G259100 "up-regulated under drought stress, mapped into a stay green mQTL (QSTG meta2.1)"(PubMedID : 24655390)@SPX domain containing protein, putative, expressed -
10 Sobic.010G013000 interacting protein of DMI3, putative, expressed -
11 Sobic.002G250300 dehydrogenase, putative, expressed -
12 Sobic.006G068000 RCLEA6 - Root cap and Late embryogenesis related family protein precursor, expressed -
13 Sobic.010G082100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
14 Sobic.010G019600 cytochrome P450 86A1, putative, expressed -
15 Sobic.005G202300 integral membrane protein TIGR01569 containing protein, expressed -
16 Sobic.001G261509 - K09872: aquaporin PIP
17 Sobic.002G323400 lipase class 3 family protein, putative, expressed -
18 Sobic.006G087300 OsCML26 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
19 Sobic.004G119600 expansin precursor, putative, expressed -
20 Sobic.006G106900 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G334200 Sobic002G334200 Sobic001G187300 Sobic001G187300 Sobic002G334200--Sobic001G187300 Sobic001G507100 Sobic001G507100 Sobic002G334200--Sobic001G507100 Sobic002G080200 Sobic002G080200 Sobic002G334200--Sobic002G080200 Sobic002G028632 Sobic002G028632 Sobic002G334200--Sobic002G028632 Sobic003G280000 Sobic003G280000 Sobic002G334200--Sobic003G280000 Sobic003G390500 Sobic003G390500 Sobic002G334200--Sobic003G390500 Sobic004G029300 Sobic004G029300 Sobic002G334200--Sobic004G029300 Sobic001G014700 Sobic001G014700 Sobic002G334200--Sobic001G014700 Sobic001G259100 Sobic001G259100 Sobic002G334200--Sobic001G259100 Sobic005G222500 Sobic005G222500 Sobic001G187300--Sobic005G222500 Sobic001G187300--Sobic001G014700 Sobic010G147200 Sobic010G147200 Sobic001G187300--Sobic010G147200 Sobic005G097400 Sobic005G097400 Sobic001G187300--Sobic005G097400 Sobic001G187300--Sobic001G507100 Sobic001G502000 Sobic001G502000 Sobic001G187300--Sobic001G502000 Sobic001G261509 Sobic001G261509 Sobic001G187300--Sobic001G261509 Sobic001G187300--Sobic003G280000 Sobic008G109300 Sobic008G109300 Sobic001G187300--Sobic008G109300 Sobic001G414800 Sobic001G414800 Sobic001G507100--Sobic001G414800 Sobic006G106900 Sobic006G106900 Sobic001G507100--Sobic006G106900 Sobic003G064800 Sobic003G064800 Sobic001G507100--Sobic003G064800 Sobic004G306900 Sobic004G306900 Sobic001G507100--Sobic004G306900 Sobic007G086300 Sobic007G086300 Sobic001G507100--Sobic007G086300 Sobic004G106100 Sobic004G106100 Sobic001G507100--Sobic004G106100 Sobic006G133200 Sobic006G133200 Sobic001G507100--Sobic006G133200 Sobic003G319400 Sobic003G319400 Sobic001G507100--Sobic003G319400 Sobic005G202300 Sobic005G202300 Sobic001G507100--Sobic005G202300 Sobic002G366200 Sobic002G366200 Sobic002G080200--Sobic002G366200 Sobic004G003100 Sobic004G003100 Sobic002G080200--Sobic004G003100 Sobic002G080200--Sobic003G280000 Sobic001G232200 Sobic001G232200 Sobic002G080200--Sobic001G232200 Sobic002G080200--Sobic002G028632 Sobic001G218400 Sobic001G218400 Sobic002G080200--Sobic001G218400 Sobic001G246700 Sobic001G246700 Sobic002G080200--Sobic001G246700 Sobic002G025500 Sobic002G025500 Sobic002G080200--Sobic002G025500 Sobic005G166700 Sobic005G166700 Sobic002G080200--Sobic005G166700 Sobic002G028632--Sobic002G366200 Sobic003G357700 Sobic003G357700 Sobic002G028632--Sobic003G357700 Sobic003G443700 Sobic003G443700 Sobic002G028632--Sobic003G443700 Sobic007G177400 Sobic007G177400 Sobic002G028632--Sobic007G177400 Sobic005G216400 Sobic005G216400 Sobic002G028632--Sobic005G216400 Sobic004G346300 Sobic004G346300 Sobic002G028632--Sobic004G346300 Sobic002G028632--Sobic002G025500 Sobic007G064500 Sobic007G064500 Sobic002G028632--Sobic007G064500 Sobic002G178101 Sobic002G178101 Sobic002G028632--Sobic002G178101 Sobic003G280000--Sobic005G202300 Sobic003G353200 Sobic003G353200 Sobic003G280000--Sobic003G353200 Sobic003G280000--Sobic006G106900 Sobic003G280000--Sobic003G319400 Sobic010G031700 Sobic010G031700 Sobic003G280000--Sobic010G031700 Sobic003G053200 Sobic003G053200 Sobic003G280000--Sobic003G053200 Sobic003G257400 Sobic003G257400 Sobic003G280000--Sobic003G257400 Sobic009G181600 Sobic009G181600 Sobic003G280000--Sobic009G181600 Sobic003G280000--Sobic001G218400 Sobic003G390500--Sobic001G507100 Sobic009G160800 Sobic009G160800 Sobic003G390500--Sobic009G160800 Sobic003G390500--Sobic009G181600 Sobic003G390500--Sobic006G106900 Sobic001G438200 Sobic001G438200 Sobic003G390500--Sobic001G438200 Sobic003G390500--Sobic004G306900 Sobic006G273300 Sobic006G273300 Sobic003G390500--Sobic006G273300 Sobic003G390500--Sobic005G202300 Sobic003G390500--Sobic003G064800 Sobic010G070400 Sobic010G070400 Sobic004G029300--Sobic010G070400 Sobic003G000100 Sobic003G000100 Sobic004G029300--Sobic003G000100 Sobic004G029300--Sobic003G257400 Sobic004G029300--Sobic001G507100 Sobic004G029300--Sobic001G218400 Sobic004G029300--Sobic004G106100 Sobic005G217766 Sobic005G217766 Sobic004G029300--Sobic005G217766 Sobic004G119800 Sobic004G119800 Sobic004G029300--Sobic004G119800 Sobic010G191600 Sobic010G191600 Sobic004G029300--Sobic010G191600 Sobic001G014700--Sobic003G280000 Sobic001G301000 Sobic001G301000 Sobic001G014700--Sobic001G301000 Sobic001G014700--Sobic002G366200 Sobic001G014700--Sobic010G147200 Sobic005G119900 Sobic005G119900 Sobic001G014700--Sobic005G119900 Sobic001G014700--Sobic003G353200 Sobic001G014700--Sobic005G202300 Sobic008G164450 Sobic008G164450 Sobic001G014700--Sobic008G164450 Sobic008G010500 Sobic008G010500 Sobic001G014700--Sobic008G010500 Sobic001G259100--Sobic010G147200 Sobic001G259100--Sobic001G014700 Sobic001G259100--Sobic001G187300 Sobic005G177100 Sobic005G177100 Sobic001G259100--Sobic005G177100 Sobic001G259100--Sobic002G366200 Sobic001G259100--Sobic008G010500 Sobic001G259100--Sobic007G177400 Sobic006G174300 Sobic006G174300 Sobic001G259100--Sobic006G174300 Sobic006G277700 Sobic006G277700 Sobic001G259100--Sobic006G277700
Octagon: transcription factors


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