Gene annotation
Transcriptome id Sobic.006G087300.1
Synonym CML39, Sb06g017310, CML37
Functional annotation OsCML26 - Calmodulin-related calcium sensor protein, expressed
UniProt C5Y8S5
Pfam PF13202 PF13833
Panther DB PTHR10891 PTHR10891:SF613
NCBI CDD KOG0027; Calmodulin and related proteins (EF-Hand superfamily)
KEGG Orthology K13448; calcium-binding protein CML
Gene Ontology GO:0005509; calcium ion binding


Orthologs (automatic annotation)
TAIR AT5G42380 : calmodulin like 37
RAP-DB (Rice) LOC_Os01g72530.1 : OsCML31 - Calmodulin-related calcium sensor protein, expressed
MaizeGDB (Corn) Zm00025a056104
Brachypodium KQK11607 , KQJ92640
Barley HORVU5Hr1G048000.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G106900 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
2 Sobic.001G507100 dirigent, putative, expressed -
3 Sobic.005G166700 sulfotransferase domain containing protein, expressed -
4 Sobic.001G414800 dirigent, putative, expressed -
5 Sobic.001G218400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MATH domain containing protein, expressed -
6 Sobic.003G353200 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Laccase 2 LAC2 (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
7 Sobic.003G280000 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.001G014700 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
9 Sobic.004G029300 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
10 Sobic.003G257400 "BG3(Ortholog in rice:Xiao et al., 20018)"(PubMedID : 31659870)@purine permease, putative, expressed -
11 Sobic.008G109300 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
12 Sobic.004G164300 - -
13 Sobic.005G202300 integral membrane protein TIGR01569 containing protein, expressed -
14 Sobic.005G097400 cell death associated protein, putative, expressed -
15 Sobic.006G019700 transferase family protein, putative, expressed -
16 Sobic.007G008600 GLTP domain containing protein, putative, expressed -
17 Sobic.001G416100 - -
18 Sobic.005G219500 cytochrome P450, putative, expressed -
19 Sobic.010G191600 cytochrome P450, putative, expressed -
20 Sobic.001G238200 expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic006G087300 Sobic006G087300 Sobic006G106900 Sobic006G106900 Sobic006G087300--Sobic006G106900 Sobic001G507100 Sobic001G507100 Sobic006G087300--Sobic001G507100 Sobic005G166700 Sobic005G166700 Sobic006G087300--Sobic005G166700 Sobic001G414800 Sobic001G414800 Sobic006G087300--Sobic001G414800 Sobic001G218400 Sobic001G218400 Sobic006G087300--Sobic001G218400 Sobic003G353200 Sobic003G353200 Sobic006G087300--Sobic003G353200 Sobic003G280000 Sobic003G280000 Sobic006G087300--Sobic003G280000 Sobic001G014700 Sobic001G014700 Sobic006G087300--Sobic001G014700 Sobic004G029300 Sobic004G029300 Sobic006G087300--Sobic004G029300 Sobic003G319400 Sobic003G319400 Sobic006G106900--Sobic003G319400 Sobic005G202300 Sobic005G202300 Sobic006G106900--Sobic005G202300 Sobic003G064800 Sobic003G064800 Sobic006G106900--Sobic003G064800 Sobic006G106900--Sobic001G414800 Sobic004G306900 Sobic004G306900 Sobic006G106900--Sobic004G306900 Sobic006G106900--Sobic001G507100 Sobic009G181600 Sobic009G181600 Sobic006G106900--Sobic009G181600 Sobic001G438200 Sobic001G438200 Sobic006G106900--Sobic001G438200 Sobic006G106900--Sobic003G280000 Sobic001G507100--Sobic001G414800 Sobic001G507100--Sobic006G106900 Sobic001G507100--Sobic003G064800 Sobic001G507100--Sobic004G306900 Sobic007G086300 Sobic007G086300 Sobic001G507100--Sobic007G086300 Sobic004G106100 Sobic004G106100 Sobic001G507100--Sobic004G106100 Sobic006G133200 Sobic006G133200 Sobic001G507100--Sobic006G133200 Sobic001G507100--Sobic003G319400 Sobic001G507100--Sobic005G202300 Sobic001G232200 Sobic001G232200 Sobic005G166700--Sobic001G232200 Sobic007G008600 Sobic007G008600 Sobic005G166700--Sobic007G008600 Sobic009G150500 Sobic009G150500 Sobic005G166700--Sobic009G150500 Sobic005G166700--Sobic003G280000 Sobic005G166700--Sobic006G106900 Sobic005G166700--Sobic003G353200 Sobic006G103300 Sobic006G103300 Sobic005G166700--Sobic006G103300 Sobic003G257400 Sobic003G257400 Sobic005G166700--Sobic003G257400 Sobic005G166700--Sobic005G202300 Sobic001G414800--Sobic006G106900 Sobic001G414800--Sobic001G507100 Sobic010G191600 Sobic010G191600 Sobic001G414800--Sobic010G191600 Sobic007G206800 Sobic007G206800 Sobic001G414800--Sobic007G206800 Sobic001G414800--Sobic003G064800 Sobic005G217766 Sobic005G217766 Sobic001G414800--Sobic005G217766 Sobic005G097400 Sobic005G097400 Sobic001G414800--Sobic005G097400 Sobic001G414800--Sobic007G086300 Sobic008G022100 Sobic008G022100 Sobic001G414800--Sobic008G022100 Sobic006G097900 Sobic006G097900 Sobic001G218400--Sobic006G097900 Sobic004G121600 Sobic004G121600 Sobic001G218400--Sobic004G121600 Sobic001G181600 Sobic001G181600 Sobic001G218400--Sobic001G181600 Sobic003G441800 Sobic003G441800 Sobic001G218400--Sobic003G441800 Sobic001G218400--Sobic010G191600 Sobic003G154500 Sobic003G154500 Sobic001G218400--Sobic003G154500 Sobic003G441700 Sobic003G441700 Sobic001G218400--Sobic003G441700 Sobic010G010000 Sobic010G010000 Sobic001G218400--Sobic010G010000 Sobic005G119900 Sobic005G119900 Sobic001G218400--Sobic005G119900 Sobic007G037600 Sobic007G037600 Sobic003G353200--Sobic007G037600 Sobic003G353200--Sobic003G280000 Sobic002G146000 Sobic002G146000 Sobic003G353200--Sobic002G146000 Sobic010G031700 Sobic010G031700 Sobic003G353200--Sobic010G031700 Sobic003G353200--Sobic005G202300 Sobic003G053600 Sobic003G053600 Sobic003G353200--Sobic003G053600 Sobic003G353200--Sobic006G106900 Sobic003G353200--Sobic001G218400 Sobic009G162300 Sobic009G162300 Sobic003G353200--Sobic009G162300 Sobic003G280000--Sobic005G202300 Sobic003G280000--Sobic003G353200 Sobic003G280000--Sobic006G106900 Sobic003G280000--Sobic003G319400 Sobic003G280000--Sobic010G031700 Sobic003G053200 Sobic003G053200 Sobic003G280000--Sobic003G053200 Sobic003G280000--Sobic003G257400 Sobic003G280000--Sobic009G181600 Sobic003G280000--Sobic001G218400 Sobic001G014700--Sobic003G280000 Sobic001G301000 Sobic001G301000 Sobic001G014700--Sobic001G301000 Sobic002G366200 Sobic002G366200 Sobic001G014700--Sobic002G366200 Sobic010G147200 Sobic010G147200 Sobic001G014700--Sobic010G147200 Sobic001G014700--Sobic005G119900 Sobic001G014700--Sobic003G353200 Sobic001G014700--Sobic005G202300 Sobic008G164450 Sobic008G164450 Sobic001G014700--Sobic008G164450 Sobic008G010500 Sobic008G010500 Sobic001G014700--Sobic008G010500 Sobic010G070400 Sobic010G070400 Sobic004G029300--Sobic010G070400 Sobic003G000100 Sobic003G000100 Sobic004G029300--Sobic003G000100 Sobic004G029300--Sobic003G257400 Sobic004G029300--Sobic001G507100 Sobic004G029300--Sobic001G218400 Sobic004G029300--Sobic004G106100 Sobic004G029300--Sobic005G217766 Sobic004G119800 Sobic004G119800 Sobic004G029300--Sobic004G119800 Sobic004G029300--Sobic010G191600
Octagon: transcription factors


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