Gene annotation
Transcriptome id Sobic.004G029300.1
Synonym Sb04g002570
Functional annotation periplasmic beta-glucosidase precursor, putative, expressed
UniProt C5XTU0
Pfam PF01915 PF00933
Panther DB PTHR30620 PTHR30620:SF23
NCBI CDD -
KEGG Orthology K05349; beta-glucosidase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G20950 : Glycosyl hydrolase family protein
RAP-DB (Rice) LOC_Os02g03870.1 : periplasmic beta-glucosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a016801 , Zm00025a008146 , Zm00025a034995
Brachypodium KQK13208 , KQK13203 , KQK13202 , KQK13201 , KQK13200 , KQK13206 , KQK13199
Barley HORVU5Hr1G095220.1 , HORVU5Hr1G095220.3 , HORVU5Hr1G095220.2 , HORVU5Hr1G095220.4 , HORVU5Hr1G095130.1 , HORVU5Hr1G095130.3 , HORVU5Hr1G095130.2 , HORVU5Hr1G095130.4 , HORVU5Hr1G095130.9 , HORVU5Hr1G095130.8 , HORVU5Hr1G095130.5 , HORVU5Hr1G095130.7 , HORVU5Hr1G095130.6 , HORVU3Hr1G034870.7 , HORVU3Hr1G034870.6 , HORVU3Hr1G034870.5 , HORVU3Hr1G034870.3 , HORVU3Hr1G034870.2 , HORVU3Hr1G034870.1 , HORVU5Hr1G095130.15 , HORVU5Hr1G095130.14 , HORVU5Hr1G095130.17 , HORVU5Hr1G095130.16 , HORVU5Hr1G095130.11 , HORVU5Hr1G095130.13 , HORVU5Hr1G095130.12 , HORVU5Hr1G095130.18
Wheat TraesCS5D02G399000 , TraesCS5D02G399000 , TraesCS5D02G399000 , TraesCS5B02G393700 , TraesCS3B02G203300 , TraesCS3B02G203300 , TraesCS3D02G179000 , TraesCS5B02G393800 , TraesCS5B02G394300 , TraesCS5B02G394200 , TraesCS5B02G394200 , TraesCS5B02G394200 , TraesCS5A02G389100 , TraesCS5D02G399100 , TraesCS5A02G388400 , TraesCS5A02G389000 , TraesCS5A02G389000 , TraesCS5A02G389000 , TraesCS5B02G393300 , TraesCS5B02G393300 , TraesCS3A02G172500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G070400 DNA binding protein, putative, expressed -
2 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
3 Sobic.003G257400 "BG3(Ortholog in rice:Xiao et al., 20018)"(PubMedID : 31659870)@purine permease, putative, expressed -
4 Sobic.001G507100 dirigent, putative, expressed -
5 Sobic.001G218400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MATH domain containing protein, expressed -
6 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.005G217766 - -
8 Sobic.004G119800 expansin precursor, putative, expressed -
9 Sobic.010G191600 cytochrome P450, putative, expressed -
10 Sobic.003G183300 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.007G086300 glycosyl hydrolases family 16, putative, expressed -
12 Sobic.004G306900 amino acid transporter, putative, expressed -
13 Sobic.003G280000 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.004G271800 WRKY66, expressed -
15 Sobic.008G109300 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
16 Sobic.004G322100 hypro1, putative, expressed -
17 Sobic.001G414800 dirigent, putative, expressed -
18 Sobic.006G019700 transferase family protein, putative, expressed -
19 Sobic.007G014200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.006G103300 wound/stress protein, putative, expressed -


Gene co-expression network
sample Sobic004G029300 Sobic004G029300 Sobic010G070400 Sobic010G070400 Sobic004G029300--Sobic010G070400 Sobic003G000100 Sobic003G000100 Sobic004G029300--Sobic003G000100 Sobic003G257400 Sobic003G257400 Sobic004G029300--Sobic003G257400 Sobic001G507100 Sobic001G507100 Sobic004G029300--Sobic001G507100 Sobic001G218400 Sobic001G218400 Sobic004G029300--Sobic001G218400 Sobic004G106100 Sobic004G106100 Sobic004G029300--Sobic004G106100 Sobic005G217766 Sobic005G217766 Sobic004G029300--Sobic005G217766 Sobic004G119800 Sobic004G119800 Sobic004G029300--Sobic004G119800 Sobic010G191600 Sobic010G191600 Sobic004G029300--Sobic010G191600 Sobic010G070400--Sobic004G029300 Sobic007G014200 Sobic007G014200 Sobic010G070400--Sobic007G014200 Sobic003G215300 Sobic003G215300 Sobic010G070400--Sobic003G215300 Sobic004G271800 Sobic004G271800 Sobic010G070400--Sobic004G271800 Sobic005G175900 Sobic005G175900 Sobic010G070400--Sobic005G175900 Sobic010G070400--Sobic003G000100 Sobic001G277500 Sobic001G277500 Sobic010G070400--Sobic001G277500 Sobic007G090600 Sobic007G090600 Sobic010G070400--Sobic007G090600 Sobic003G183300 Sobic003G183300 Sobic010G070400--Sobic003G183300 Sobic010G152400 Sobic010G152400 Sobic003G000100--Sobic010G152400 Sobic004G322100 Sobic004G322100 Sobic003G000100--Sobic004G322100 Sobic006G003100 Sobic006G003100 Sobic003G000100--Sobic006G003100 Sobic004G306900 Sobic004G306900 Sobic003G000100--Sobic004G306900 Sobic006G092700 Sobic006G092700 Sobic003G000100--Sobic006G092700 Sobic003G000100--Sobic004G106100 Sobic003G000100--Sobic004G271800 Sobic003G240400 Sobic003G240400 Sobic003G000100--Sobic003G240400 Sobic007G086300 Sobic007G086300 Sobic003G000100--Sobic007G086300 Sobic003G257400--Sobic003G000100 Sobic003G257400--Sobic007G086300 Sobic003G257400--Sobic004G106100 Sobic006G106900 Sobic006G106900 Sobic003G257400--Sobic006G106900 Sobic001G414800 Sobic001G414800 Sobic003G257400--Sobic001G414800 Sobic003G353200 Sobic003G353200 Sobic003G257400--Sobic003G353200 Sobic003G280000 Sobic003G280000 Sobic003G257400--Sobic003G280000 Sobic003G257400--Sobic006G003100 Sobic003G257400--Sobic004G306900 Sobic001G507100--Sobic001G414800 Sobic001G507100--Sobic006G106900 Sobic003G064800 Sobic003G064800 Sobic001G507100--Sobic003G064800 Sobic001G507100--Sobic004G306900 Sobic001G507100--Sobic007G086300 Sobic001G507100--Sobic004G106100 Sobic006G133200 Sobic006G133200 Sobic001G507100--Sobic006G133200 Sobic003G319400 Sobic003G319400 Sobic001G507100--Sobic003G319400 Sobic005G202300 Sobic005G202300 Sobic001G507100--Sobic005G202300 Sobic006G097900 Sobic006G097900 Sobic001G218400--Sobic006G097900 Sobic004G121600 Sobic004G121600 Sobic001G218400--Sobic004G121600 Sobic001G181600 Sobic001G181600 Sobic001G218400--Sobic001G181600 Sobic003G441800 Sobic003G441800 Sobic001G218400--Sobic003G441800 Sobic001G218400--Sobic010G191600 Sobic003G154500 Sobic003G154500 Sobic001G218400--Sobic003G154500 Sobic003G441700 Sobic003G441700 Sobic001G218400--Sobic003G441700 Sobic010G010000 Sobic010G010000 Sobic001G218400--Sobic010G010000 Sobic005G119900 Sobic005G119900 Sobic001G218400--Sobic005G119900 Sobic004G106100--Sobic007G086300 Sobic006G205700 Sobic006G205700 Sobic004G106100--Sobic006G205700 Sobic004G106100--Sobic004G306900 Sobic004G106100--Sobic003G000100 Sobic010G031700 Sobic010G031700 Sobic004G106100--Sobic010G031700 Sobic003G282300 Sobic003G282300 Sobic004G106100--Sobic003G282300 Sobic002G391400 Sobic002G391400 Sobic004G106100--Sobic002G391400 Sobic002G233200 Sobic002G233200 Sobic004G106100--Sobic002G233200 Sobic004G106100--Sobic010G152400 Sobic005G217766--Sobic010G191600 Sobic005G217766--Sobic002G391400 Sobic002G111900 Sobic002G111900 Sobic005G217766--Sobic002G111900 Sobic005G217766--Sobic006G205700 Sobic005G217766--Sobic001G414800 Sobic007G206800 Sobic007G206800 Sobic005G217766--Sobic007G206800 Sobic005G217766--Sobic003G441800 Sobic010G191700 Sobic010G191700 Sobic005G217766--Sobic010G191700 Sobic005G217766--Sobic004G106100 Sobic005G080600 Sobic005G080600 Sobic004G119800--Sobic005G080600 Sobic004G119800--Sobic004G306900 Sobic006G196400 Sobic006G196400 Sobic004G119800--Sobic006G196400 Sobic009G259800 Sobic009G259800 Sobic004G119800--Sobic009G259800 Sobic004G119800--Sobic001G218400 Sobic004G119800--Sobic006G106900 Sobic004G119800--Sobic007G206800 Sobic004G119800--Sobic006G205700 Sobic004G119800--Sobic006G092700 Sobic010G191600--Sobic005G217766 Sobic005G097400 Sobic005G097400 Sobic010G191600--Sobic005G097400 Sobic010G191600--Sobic002G111900 Sobic010G191600--Sobic002G391400 Sobic010G191600--Sobic006G205700 Sobic010G191600--Sobic001G218400 Sobic010G191600--Sobic010G191700 Sobic010G191600--Sobic003G441800 Sobic010G191600--Sobic007G206800
Octagon: transcription factors


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