Gene annotation
Transcriptome id Sobic.005G048400.2
Synonym Sb05g003950, RPS3, RPM1
Functional annotation NBS-LRR disease resistance protein, putative, expressed
UniProt A0A1Z5RHC5
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF556
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology K13457; RPM1, disease resistance protein RPM1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46730 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os06g17880.1 : NBS-LRR disease resistance protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU7Hr1G006980.16 , HORVU7Hr1G006980.6 , HORVU7Hr1G006980.7 , HORVU7Hr1G006980.4 , HORVU7Hr1G006980.5 , HORVU7Hr1G006980.2 , HORVU7Hr1G006980.3 , HORVU7Hr1G006980.1 , HORVU7Hr1G006980.9 , HORVU7Hr1G006980.14 , HORVU7Hr1G006980.15 , HORVU7Hr1G006980.10 , HORVU7Hr1G006980.11 , HORVU7Hr1G006980.12 , HORVU7Hr1G006980.13
Wheat TraesCS7A02G034600 , TraesCS7D02G035900 , TraesCS4A02G448600 , TraesCS7D02G031000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G070100 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR1 - Auxin-responsive SAUR gene family member, expressed -
2 Sobic.001G506500 exostosin family domain containing protein, expressed -
3 Sobic.001G277600 TKL_IRAK_DUF26-la.5 - DUF26 kinases have homology to DUF26 containing loci, expressed -
4 Sobic.003G176300 - -
5 Sobic.003G240500 glycosyl transferase, group 1 domain containing protein, expressed -
6 Sobic.010G082100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
7 Sobic.004G308500 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
8 Sobic.001G506700 exostosin family domain containing protein, expressed -
9 Sobic.005G110514 - -
10 Sobic.007G149000 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@cytochrome P450, putative, expressed -
11 Sobic.006G266800 aspartic proteinase nepenthesin precursor, putative, expressed -
12 Sobic.007G007300 methyltransferase domain containing protein, expressed -
13 Sobic.009G165100 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
14 Sobic.001G499701 - -
15 Sobic.006G092100 no apical meristem protein, putative, expressed -
16 Sobic.001G526500 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
17 Sobic.004G187600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
18 Sobic.008G033700 pleiotropic drug resistance protein 15, putative, expressed -
19 Sobic.001G272800 NBS-LRR disease resistance protein, putative, expressed -
20 Sobic.006G133200 expressed protein -


Gene co-expression network
sample Sobic005G048400 Sobic005G048400 Sobic001G070100 Sobic001G070100 Sobic005G048400--Sobic001G070100 Sobic001G506500 Sobic001G506500 Sobic005G048400--Sobic001G506500 Sobic001G277600 Sobic001G277600 Sobic005G048400--Sobic001G277600 Sobic003G176300 Sobic003G176300 Sobic005G048400--Sobic003G176300 Sobic003G240500 Sobic003G240500 Sobic005G048400--Sobic003G240500 Sobic010G082100 Sobic010G082100 Sobic005G048400--Sobic010G082100 Sobic004G308500 Sobic004G308500 Sobic005G048400--Sobic004G308500 Sobic001G506700 Sobic001G506700 Sobic005G048400--Sobic001G506700 Sobic005G110514 Sobic005G110514 Sobic005G048400--Sobic005G110514 Sobic001G070100--Sobic005G048400 Sobic001G070100--Sobic001G506500 Sobic004G187600 Sobic004G187600 Sobic001G070100--Sobic004G187600 Sobic003G317300 Sobic003G317300 Sobic001G070100--Sobic003G317300 Sobic001G070100--Sobic003G176300 Sobic004G080300 Sobic004G080300 Sobic001G070100--Sobic004G080300 Sobic007G005100 Sobic007G005100 Sobic001G070100--Sobic007G005100 Sobic001G499701 Sobic001G499701 Sobic001G070100--Sobic001G499701 Sobic006G133300 Sobic006G133300 Sobic001G070100--Sobic006G133300 Sobic001G506500--Sobic010G082100 Sobic001G506500--Sobic003G240500 Sobic001G506500--Sobic005G048400 Sobic001G506500--Sobic003G176300 Sobic007G007300 Sobic007G007300 Sobic001G506500--Sobic007G007300 Sobic001G506500--Sobic004G308500 Sobic001G506500--Sobic001G070100 Sobic001G526500 Sobic001G526500 Sobic001G506500--Sobic001G526500 Sobic007G149000 Sobic007G149000 Sobic001G506500--Sobic007G149000 Sobic001G277600--Sobic005G110514 Sobic001G277600--Sobic005G048400 Sobic001G277600--Sobic003G240500 Sobic010G241700 Sobic010G241700 Sobic001G277600--Sobic010G241700 Sobic001G326400 Sobic001G326400 Sobic001G277600--Sobic001G326400 Sobic001G277600--Sobic004G308500 Sobic006G133200 Sobic006G133200 Sobic001G277600--Sobic006G133200 Sobic004G003100 Sobic004G003100 Sobic001G277600--Sobic004G003100 Sobic001G277600--Sobic001G506500 Sobic005G049350 Sobic005G049350 Sobic003G176300--Sobic005G049350 Sobic001G521600 Sobic001G521600 Sobic003G176300--Sobic001G521600 Sobic003G176300--Sobic007G149000 Sobic005G216700 Sobic005G216700 Sobic003G176300--Sobic005G216700 Sobic006G266800 Sobic006G266800 Sobic003G176300--Sobic006G266800 Sobic009G079200 Sobic009G079200 Sobic003G176300--Sobic009G079200 Sobic009G259800 Sobic009G259800 Sobic003G176300--Sobic009G259800 Sobic003G176300--Sobic006G133200 Sobic003G176300--Sobic006G133300 Sobic003G240500--Sobic010G082100 Sobic003G240500--Sobic007G007300 Sobic003G240500--Sobic006G266800 Sobic003G240500--Sobic005G110514 Sobic003G240500--Sobic004G308500 Sobic004G322000 Sobic004G322000 Sobic003G240500--Sobic004G322000 Sobic003G240500--Sobic001G506500 Sobic002G166150 Sobic002G166150 Sobic003G240500--Sobic002G166150 Sobic003G240500--Sobic001G506700 Sobic010G082100--Sobic003G240500 Sobic010G082100--Sobic001G506500 Sobic010G082100--Sobic007G007300 Sobic010G082100--Sobic005G110514 Sobic009G106100 Sobic009G106100 Sobic010G082100--Sobic009G106100 Sobic010G082100--Sobic006G266800 Sobic010G082100--Sobic004G308500 Sobic001G274400 Sobic001G274400 Sobic010G082100--Sobic001G274400 Sobic010G170150 Sobic010G170150 Sobic010G082100--Sobic010G170150 Sobic002G289500 Sobic002G289500 Sobic004G308500--Sobic002G289500 Sobic004G014600 Sobic004G014600 Sobic004G308500--Sobic004G014600 Sobic004G121600 Sobic004G121600 Sobic004G308500--Sobic004G121600 Sobic001G415100 Sobic001G415100 Sobic004G308500--Sobic001G415100 Sobic007G111800 Sobic007G111800 Sobic004G308500--Sobic007G111800 Sobic005G046400 Sobic005G046400 Sobic004G308500--Sobic005G046400 Sobic005G106300 Sobic005G106300 Sobic004G308500--Sobic005G106300 Sobic006G097900 Sobic006G097900 Sobic004G308500--Sobic006G097900 Sobic003G441800 Sobic003G441800 Sobic004G308500--Sobic003G441800 Sobic002G411000 Sobic002G411000 Sobic001G506700--Sobic002G411000 Sobic005G065700 Sobic005G065700 Sobic001G506700--Sobic005G065700 Sobic002G019100 Sobic002G019100 Sobic001G506700--Sobic002G019100 Sobic005G071900 Sobic005G071900 Sobic001G506700--Sobic005G071900 Sobic001G506600 Sobic001G506600 Sobic001G506700--Sobic001G506600 Sobic006G209000 Sobic006G209000 Sobic001G506700--Sobic006G209000 Sobic006G009700 Sobic006G009700 Sobic001G506700--Sobic006G009700 Sobic005G066300 Sobic005G066300 Sobic001G506700--Sobic005G066300 Sobic001G503000 Sobic001G503000 Sobic001G506700--Sobic001G503000 Sobic005G110514--Sobic004G003100 Sobic005G110514--Sobic004G308500 Sobic009G233100 Sobic009G233100 Sobic005G110514--Sobic009G233100 Sobic005G110514--Sobic009G106100 Sobic003G007400 Sobic003G007400 Sobic005G110514--Sobic003G007400 Sobic007G186500 Sobic007G186500 Sobic005G110514--Sobic007G186500 Sobic001G506800 Sobic001G506800 Sobic005G110514--Sobic001G506800 Sobic005G216600 Sobic005G216600 Sobic005G110514--Sobic005G216600 Sobic005G110514--Sobic004G121600
Octagon: transcription factors


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