Gene annotation
Transcriptome id Sobic.001G499701.1
Synonym -
Functional annotation -
UniProt A0A1Z5SBD8
Pfam PF03330 PF01357
Panther DB PTHR31867 PTHR31867:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G20190 : expansin 11
RAP-DB (Rice) LOC_Os03g06010.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a023911 , Zm00025a027043 , Zm00025a043994 , Zm00025a008818 , Zm00025a024073 , Zm00025a040298 , Zm00025a040299 , Zm00025a019850 , Zm00025a019851 , Zm00025a019852 , Zm00025a006808 , Zm00025a019849 , Zm00025a016421 , Zm00025a040300 , Zm00025a053441
Brachypodium KQJ81960 , KQJ96856 , KQK05753 , KQK12421
Barley HORVU4Hr1G067850.2 , HORVU4Hr1G067850.3 , HORVU5Hr1G106500.5 , HORVU5Hr1G121370.2 , HORVU5Hr1G121370.1 , HORVU3Hr1G076670.2 , HORVU3Hr1G034030.4 , HORVU3Hr1G076640.2 , HORVU3Hr1G076640.3 , HORVU3Hr1G076640.1 , HORVU3Hr1G076640.4 , HORVU5Hr1G106500.6 , HORVU5Hr1G106500.4 , HORVU5Hr1G106500.3 , HORVU5Hr1G106500.2 , HORVU5Hr1G106500.1 , HORVU2Hr1G093690.1 , HORVU2Hr1G093690.2 , HORVU3Hr1G076670.1 , HORVU3Hr1G034030.3 , HORVU3Hr1G034030.2 , HORVU3Hr1G034030.1
Wheat TraesCS3B02G348000 , TraesCS3D02G313200 , TraesCS3D02G313400 , TraesCS4A02G339200 , TraesCS5A02G443400 , TraesCS1D02G299700 , TraesCS1A02G300200 , TraesCS1A02G300200 , TraesCS4B02G246500 , TraesCS5B02G548500 , TraesCS5B02G448000 , TraesCS2B02G411700 , TraesCS3A02G317900 , TraesCS1B02G310300 , TraesCS5D02G450900 , TraesCS3D02G175800 , TraesCS7B02G293800 , TraesCS6B02G336500 , TraesCS4A02G034400 , TraesCS5D02G535500 , TraesCS7D02G387400 , TraesCS7D02G387400 , TraesCS3A02G165900 , TraesCS4A02G058300 , TraesCS3D02G176000 , TraesCS3B02G200100 , TraesCS3D02G313300 , TraesCS3A02G165600 , TraesCS3D02G191300 , TraesCS3B02G199900 , TraesCS2D02G391600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G049350 - -
2 Sobic.003G176300 - -
3 Sobic.007G149000 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@cytochrome P450, putative, expressed -
4 Sobic.005G216700 plant protein of unknown function domain containing protein, expressed -
5 Sobic.009G015200 - -
6 Sobic.009G098000 expressed protein -
7 Sobic.007G019900 expansin precursor, putative, expressed -
8 Sobic.009G035900 CHIT10 - Chitinase family protein precursor, expressed -
9 Sobic.005G220740 - -
10 Sobic.001G216500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@nodulin, putative, expressed K07192: flotillin
11 Sobic.009G079200 expressed protein -
12 Sobic.005G220800 receptor-like protein kinase 2 precursor, putative, expressed -
13 Sobic.001G521600 Leucine-rich repeat family protein("PubMedID : 26759170,PubMedID : 24597475")@leucine-rich repeat family protein, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
14 Sobic.007G085500 glycosyl hydrolases family 16, putative, expressed -
15 Sobic.005G228400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
16 Sobic.006G133300 expressed protein -
17 Sobic.001G076300 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
18 Sobic.001G182200 GDSL-like lipase/acylhydrolase, putative, expressed -
19 Sobic.002G392100 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.005G048400 NBS-LRR disease resistance protein, putative, expressed K13457: RPM1, disease resistance protein RPM1


Gene co-expression network
sample Sobic001G499701 Sobic001G499701 Sobic005G049350 Sobic005G049350 Sobic001G499701--Sobic005G049350 Sobic003G176300 Sobic003G176300 Sobic001G499701--Sobic003G176300 Sobic007G149000 Sobic007G149000 Sobic001G499701--Sobic007G149000 Sobic005G216700 Sobic005G216700 Sobic001G499701--Sobic005G216700 Sobic009G015200 Sobic009G015200 Sobic001G499701--Sobic009G015200 Sobic009G098000 Sobic009G098000 Sobic001G499701--Sobic009G098000 Sobic007G019900 Sobic007G019900 Sobic001G499701--Sobic007G019900 Sobic009G035900 Sobic009G035900 Sobic001G499701--Sobic009G035900 Sobic005G220740 Sobic005G220740 Sobic001G499701--Sobic005G220740 Sobic001G521600 Sobic001G521600 Sobic005G049350--Sobic001G521600 Sobic005G049350--Sobic007G149000 Sobic005G049350--Sobic003G176300 Sobic004G337950 Sobic004G337950 Sobic005G049350--Sobic004G337950 Sobic005G049350--Sobic009G098000 Sobic005G049350--Sobic001G499701 Sobic001G233100 Sobic001G233100 Sobic005G049350--Sobic001G233100 Sobic009G018300 Sobic009G018300 Sobic005G049350--Sobic009G018300 Sobic009G079200 Sobic009G079200 Sobic005G049350--Sobic009G079200 Sobic003G176300--Sobic005G049350 Sobic003G176300--Sobic001G521600 Sobic003G176300--Sobic007G149000 Sobic003G176300--Sobic005G216700 Sobic006G266800 Sobic006G266800 Sobic003G176300--Sobic006G266800 Sobic003G176300--Sobic009G079200 Sobic009G259800 Sobic009G259800 Sobic003G176300--Sobic009G259800 Sobic006G133200 Sobic006G133200 Sobic003G176300--Sobic006G133200 Sobic006G133300 Sobic006G133300 Sobic003G176300--Sobic006G133300 Sobic007G149000--Sobic005G049350 Sobic007G094100 Sobic007G094100 Sobic007G149000--Sobic007G094100 Sobic007G149000--Sobic001G521600 Sobic006G171300 Sobic006G171300 Sobic007G149000--Sobic006G171300 Sobic007G149000--Sobic003G176300 Sobic007G149000--Sobic004G337950 Sobic005G012600 Sobic005G012600 Sobic007G149000--Sobic005G012600 Sobic007G149000--Sobic009G098000 Sobic010G115000 Sobic010G115000 Sobic007G149000--Sobic010G115000 Sobic004G351200 Sobic004G351200 Sobic005G216700--Sobic004G351200 Sobic009G032900 Sobic009G032900 Sobic005G216700--Sobic009G032900 Sobic010G139100 Sobic010G139100 Sobic005G216700--Sobic010G139100 Sobic002G068000 Sobic002G068000 Sobic005G216700--Sobic002G068000 Sobic002G334000 Sobic002G334000 Sobic005G216700--Sobic002G334000 Sobic007G206800 Sobic007G206800 Sobic005G216700--Sobic007G206800 Sobic010G158400 Sobic010G158400 Sobic005G216700--Sobic010G158400 Sobic005G080600 Sobic005G080600 Sobic005G216700--Sobic005G080600 Sobic003G046700 Sobic003G046700 Sobic005G216700--Sobic003G046700 Sobic001G182200 Sobic001G182200 Sobic009G015200--Sobic001G182200 Sobic009G015200--Sobic009G035900 Sobic009G015200--Sobic001G499701 Sobic009G015200--Sobic003G176300 Sobic003G240500 Sobic003G240500 Sobic009G015200--Sobic003G240500 Sobic005G228501 Sobic005G228501 Sobic009G015200--Sobic005G228501 Sobic009G015200--Sobic006G266800 Sobic002G122400 Sobic002G122400 Sobic009G015200--Sobic002G122400 Sobic010G162800 Sobic010G162800 Sobic009G015200--Sobic010G162800 Sobic009G098000--Sobic005G049350 Sobic009G098000--Sobic001G521600 Sobic009G098000--Sobic004G337950 Sobic009G098000--Sobic007G149000 Sobic009G098000--Sobic009G079200 Sobic009G098000--Sobic003G176300 Sobic001G506100 Sobic001G506100 Sobic009G098000--Sobic001G506100 Sobic009G098000--Sobic009G018300 Sobic004G080300 Sobic004G080300 Sobic009G098000--Sobic004G080300 Sobic006G135500 Sobic006G135500 Sobic007G019900--Sobic006G135500 Sobic008G145900 Sobic008G145900 Sobic007G019900--Sobic008G145900 Sobic001G238100 Sobic001G238100 Sobic007G019900--Sobic001G238100 Sobic007G019900--Sobic010G139100 Sobic002G392100 Sobic002G392100 Sobic007G019900--Sobic002G392100 Sobic007G019900--Sobic005G216700 Sobic007G019900--Sobic002G068000 Sobic007G019900--Sobic009G032900 Sobic007G019900--Sobic002G334000 Sobic001G237800 Sobic001G237800 Sobic009G035900--Sobic001G237800 Sobic005G127400 Sobic005G127400 Sobic009G035900--Sobic005G127400 Sobic006G150100 Sobic006G150100 Sobic009G035900--Sobic006G150100 Sobic003G349400 Sobic003G349400 Sobic009G035900--Sobic003G349400 Sobic003G132400 Sobic003G132400 Sobic009G035900--Sobic003G132400 Sobic006G170600 Sobic006G170600 Sobic009G035900--Sobic006G170600 Sobic008G121900 Sobic008G121900 Sobic009G035900--Sobic008G121900 Sobic002G003700 Sobic002G003700 Sobic009G035900--Sobic002G003700 Sobic009G035900--Sobic010G162800 Sobic005G220800 Sobic005G220800 Sobic005G220740--Sobic005G220800 Sobic005G220740--Sobic005G049350 Sobic005G220740--Sobic007G149000 Sobic005G220740--Sobic001G499701 Sobic004G013700 Sobic004G013700 Sobic005G220740--Sobic004G013700 Sobic005G220740--Sobic003G176300 Sobic005G220740--Sobic009G098000 Sobic004G010050 Sobic004G010050 Sobic005G220740--Sobic004G010050 Sobic005G220740--Sobic004G337950
Octagon: transcription factors


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