Gene annotation
Transcriptome id Sobic.008G137300.1
Synonym Sb08g018835
Functional annotation RALFL43 - Rapid ALkalinization Factor RALF family protein precursor, expressed
UniProt A0A1B6PE16
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g38340.1 : RALFL42 - Rapid ALkalinization Factor RALF family protein precursor, expressed
MaizeGDB (Corn) Zm00025a004256
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G281100 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.009G183800 ICE-like protease p20 domain containing protein, putative, expressed -
3 Sobic.010G083400 gibberellin receptor GID1L2, putative, expressed -
4 Sobic.002G334200 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
5 Sobic.003G390500 POEI32 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
6 Sobic.002G356500 expressed protein -
7 Sobic.001G094800 similar to IAA1 protein(PubMedID : 29862293)@"domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA13 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
8 Sobic.002G391800 peroxidase, putative, expressed K00430: peroxidase
9 Sobic.010G128400 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.001G187300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@sulfate transporter, putative, expressed -
11 Sobic.001G379400 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.001G062500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde oxidase, putative, expressed K11817: indole-3-acetaldehyde oxidase
13 Sobic.002G334100 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
14 Sobic.001G242100 expressed protein -
15 Sobic.001G144700 LTPL71 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.009G015200 - -
17 Sobic.003G240500 glycosyl transferase, group 1 domain containing protein, expressed -
18 Sobic.001G502000 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
19 Sobic.004G119600 expansin precursor, putative, expressed -
20 Sobic.006G277700 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic008G137300 Sobic008G137300 Sobic002G281100 Sobic002G281100 Sobic008G137300--Sobic002G281100 Sobic009G183800 Sobic009G183800 Sobic008G137300--Sobic009G183800 Sobic010G083400 Sobic010G083400 Sobic008G137300--Sobic010G083400 Sobic002G334200 Sobic002G334200 Sobic008G137300--Sobic002G334200 Sobic003G390500 Sobic003G390500 Sobic008G137300--Sobic003G390500 Sobic002G356500 Sobic002G356500 Sobic008G137300--Sobic002G356500 Sobic001G094800 Sobic001G094800 Sobic008G137300--Sobic001G094800 Sobic002G391800 Sobic002G391800 Sobic008G137300--Sobic002G391800 Sobic010G128400 Sobic010G128400 Sobic008G137300--Sobic010G128400 Sobic006G250400 Sobic006G250400 Sobic002G281100--Sobic006G250400 Sobic001G277600 Sobic001G277600 Sobic002G281100--Sobic001G277600 Sobic002G281100--Sobic002G334200 Sobic002G281100--Sobic002G356500 Sobic009G100100 Sobic009G100100 Sobic002G281100--Sobic009G100100 Sobic002G281100--Sobic008G137300 Sobic010G130400 Sobic010G130400 Sobic002G281100--Sobic010G130400 Sobic001G499701 Sobic001G499701 Sobic002G281100--Sobic001G499701 Sobic003G240500 Sobic003G240500 Sobic002G281100--Sobic003G240500 Sobic010G212500 Sobic010G212500 Sobic009G183800--Sobic010G212500 Sobic005G215400 Sobic005G215400 Sobic009G183800--Sobic005G215400 Sobic004G348800 Sobic004G348800 Sobic009G183800--Sobic004G348800 Sobic001G379400 Sobic001G379400 Sobic009G183800--Sobic001G379400 Sobic003G119500 Sobic003G119500 Sobic009G183800--Sobic003G119500 Sobic002G301900 Sobic002G301900 Sobic009G183800--Sobic002G301900 Sobic010G045500 Sobic010G045500 Sobic009G183800--Sobic010G045500 Sobic006G089000 Sobic006G089000 Sobic009G183800--Sobic006G089000 Sobic004G297900 Sobic004G297900 Sobic009G183800--Sobic004G297900 Sobic002G244300 Sobic002G244300 Sobic010G083400--Sobic002G244300 Sobic002G368300 Sobic002G368300 Sobic010G083400--Sobic002G368300 Sobic002G154600 Sobic002G154600 Sobic010G083400--Sobic002G154600 Sobic009G088900 Sobic009G088900 Sobic010G083400--Sobic009G088900 Sobic007G159450 Sobic007G159450 Sobic010G083400--Sobic007G159450 Sobic002G365801 Sobic002G365801 Sobic010G083400--Sobic002G365801 Sobic008G055100 Sobic008G055100 Sobic010G083400--Sobic008G055100 Sobic004G071000 Sobic004G071000 Sobic010G083400--Sobic004G071000 Sobic003G121100 Sobic003G121100 Sobic010G083400--Sobic003G121100 Sobic001G187300 Sobic001G187300 Sobic002G334200--Sobic001G187300 Sobic001G507100 Sobic001G507100 Sobic002G334200--Sobic001G507100 Sobic002G080200 Sobic002G080200 Sobic002G334200--Sobic002G080200 Sobic002G028632 Sobic002G028632 Sobic002G334200--Sobic002G028632 Sobic003G280000 Sobic003G280000 Sobic002G334200--Sobic003G280000 Sobic002G334200--Sobic003G390500 Sobic004G029300 Sobic004G029300 Sobic002G334200--Sobic004G029300 Sobic001G014700 Sobic001G014700 Sobic002G334200--Sobic001G014700 Sobic001G259100 Sobic001G259100 Sobic002G334200--Sobic001G259100 Sobic003G390500--Sobic001G507100 Sobic009G160800 Sobic009G160800 Sobic003G390500--Sobic009G160800 Sobic009G181600 Sobic009G181600 Sobic003G390500--Sobic009G181600 Sobic006G106900 Sobic006G106900 Sobic003G390500--Sobic006G106900 Sobic001G438200 Sobic001G438200 Sobic003G390500--Sobic001G438200 Sobic004G306900 Sobic004G306900 Sobic003G390500--Sobic004G306900 Sobic006G273300 Sobic006G273300 Sobic003G390500--Sobic006G273300 Sobic005G202300 Sobic005G202300 Sobic003G390500--Sobic005G202300 Sobic003G064800 Sobic003G064800 Sobic003G390500--Sobic003G064800 Sobic002G356500--Sobic009G183800 Sobic007G108700 Sobic007G108700 Sobic002G356500--Sobic007G108700 Sobic005G228400 Sobic005G228400 Sobic002G356500--Sobic005G228400 Sobic008G019900 Sobic008G019900 Sobic002G356500--Sobic008G019900 Sobic002G356500--Sobic002G281100 Sobic001G062500 Sobic001G062500 Sobic002G356500--Sobic001G062500 Sobic002G218800 Sobic002G218800 Sobic002G356500--Sobic002G218800 Sobic004G046400 Sobic004G046400 Sobic002G356500--Sobic004G046400 Sobic009G035900 Sobic009G035900 Sobic002G356500--Sobic009G035900 Sobic001G094800--Sobic008G137300 Sobic001G094800--Sobic002G218800 Sobic004G348500 Sobic004G348500 Sobic001G094800--Sobic004G348500 Sobic001G094800--Sobic003G390500 Sobic001G094800--Sobic002G356500 Sobic001G094800--Sobic004G046400 Sobic003G212300 Sobic003G212300 Sobic001G094800--Sobic003G212300 Sobic004G089100 Sobic004G089100 Sobic001G094800--Sobic004G089100 Sobic001G094800--Sobic003G121100 Sobic001G234900 Sobic001G234900 Sobic002G391800--Sobic001G234900 Sobic005G160700 Sobic005G160700 Sobic002G391800--Sobic005G160700 Sobic001G342400 Sobic001G342400 Sobic002G391800--Sobic001G342400 Sobic001G242100 Sobic001G242100 Sobic002G391800--Sobic001G242100 Sobic002G391800--Sobic001G379400 Sobic001G232700 Sobic001G232700 Sobic002G391800--Sobic001G232700 Sobic002G377600 Sobic002G377600 Sobic002G391800--Sobic002G377600 Sobic005G222500 Sobic005G222500 Sobic002G391800--Sobic005G222500 Sobic002G391800--Sobic010G045500 Sobic003G400900 Sobic003G400900 Sobic010G128400--Sobic003G400900 Sobic009G065800 Sobic009G065800 Sobic010G128400--Sobic009G065800 Sobic006G079300 Sobic006G079300 Sobic010G128400--Sobic006G079300 Sobic002G118801 Sobic002G118801 Sobic010G128400--Sobic002G118801 Sobic007G086300 Sobic007G086300 Sobic010G128400--Sobic007G086300 Sobic001G229000 Sobic001G229000 Sobic010G128400--Sobic001G229000 Sobic010G128400--Sobic001G242100 Sobic001G319300 Sobic001G319300 Sobic010G128400--Sobic001G319300 Sobic010G128400--Sobic005G222500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.