Gene annotation
Transcriptome id Sobic.009G183800.2
Synonym Sb09g024350, AtMC6, MC6
Functional annotation ICE-like protease p20 domain containing protein, putative, expressed
UniProt A0A1Z5R3B9
Pfam PF00656
Panther DB PTHR31810 PTHR31810:SF5
NCBI CDD KOG1546; Metacaspase involved in regulation of apoptosis
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004197cysteine-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT1G79320 : metacaspase 6
RAP-DB (Rice) LOC_Os05g41670.1 : ICE-like protease p20 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a037861 , Zm00025a027196
Brachypodium KQK05597 , KQK05598
Barley HORVU1Hr1G067230.3 , HORVU1Hr1G067230.2 , HORVU1Hr1G067230.1 , HORVU1Hr1G067230.6 , HORVU1Hr1G067230.5 , HORVU1Hr1G067230.4 , HORVU5Hr1G044610.4 , HORVU5Hr1G044610.2 , HORVU5Hr1G044610.3 , HORVU5Hr1G044610.1
Wheat TraesCS1B02G325800 , TraesCS1B02G325700 , TraesCS1D02G314300 , TraesCS1A02G313900 , TraesCS2B02G504700 , TraesCS1A02G313800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G212500 - -
2 Sobic.005G215400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
3 Sobic.004G348800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
4 Sobic.001G379400 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.003G119500 expressed protein -
6 Sobic.002G301900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
7 Sobic.010G045500 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
8 Sobic.006G089000 helix-loop-helix DNA-binding protein, putative, expressed -
9 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.009G109000 expressed protein -
11 Sobic.002G124500 expansin precursor, putative, expressed -
12 Sobic.001G242100 expressed protein -
13 Sobic.003G053400 hydrolase, alpha/beta fold family protein, putative, expressed -
14 Sobic.004G209400 carbonyl reductase 3, putative, expressed -
15 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
16 Sobic.005G160700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
17 Sobic.001G342400 SPX domain-3("PubMedID : 26759170,PubMedID : 24597475")@SPX domain-containing protein, putative, expressed -
18 Sobic.008G009400 - -
19 Sobic.002G425000 VQ domain containing protein, putative, expressed -
20 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -


Gene co-expression network
sample Sobic009G183800 Sobic009G183800 Sobic010G212500 Sobic010G212500 Sobic009G183800--Sobic010G212500 Sobic005G215400 Sobic005G215400 Sobic009G183800--Sobic005G215400 Sobic004G348800 Sobic004G348800 Sobic009G183800--Sobic004G348800 Sobic001G379400 Sobic001G379400 Sobic009G183800--Sobic001G379400 Sobic003G119500 Sobic003G119500 Sobic009G183800--Sobic003G119500 Sobic002G301900 Sobic002G301900 Sobic009G183800--Sobic002G301900 Sobic010G045500 Sobic010G045500 Sobic009G183800--Sobic010G045500 Sobic006G089000 Sobic006G089000 Sobic009G183800--Sobic006G089000 Sobic004G297900 Sobic004G297900 Sobic009G183800--Sobic004G297900 Sobic002G261500 Sobic002G261500 Sobic010G212500--Sobic002G261500 Sobic010G212500--Sobic004G348800 Sobic002G365801 Sobic002G365801 Sobic010G212500--Sobic002G365801 Sobic002G365550 Sobic002G365550 Sobic010G212500--Sobic002G365550 Sobic001G395800 Sobic001G395800 Sobic010G212500--Sobic001G395800 Sobic010G212500--Sobic003G119500 Sobic003G053400 Sobic003G053400 Sobic010G212500--Sobic003G053400 Sobic003G311800 Sobic003G311800 Sobic010G212500--Sobic003G311800 Sobic009G109000 Sobic009G109000 Sobic010G212500--Sobic009G109000 Sobic005G215400--Sobic004G348800 Sobic007G204700 Sobic007G204700 Sobic005G215400--Sobic007G204700 Sobic005G215400--Sobic010G045500 Sobic001G430100 Sobic001G430100 Sobic005G215400--Sobic001G430100 Sobic005G215400--Sobic010G212500 Sobic002G105300 Sobic002G105300 Sobic005G215400--Sobic002G105300 Sobic005G215400--Sobic003G119500 Sobic007G050200 Sobic007G050200 Sobic005G215400--Sobic007G050200 Sobic004G322800 Sobic004G322800 Sobic005G215400--Sobic004G322800 Sobic001G264000 Sobic001G264000 Sobic004G348800--Sobic001G264000 Sobic004G348800--Sobic005G215400 Sobic004G348800--Sobic010G212500 Sobic004G348800--Sobic001G430100 Sobic002G003800 Sobic002G003800 Sobic004G348800--Sobic002G003800 Sobic006G197100 Sobic006G197100 Sobic004G348800--Sobic006G197100 Sobic004G348800--Sobic009G109000 Sobic004G348800--Sobic003G311800 Sobic004G348800--Sobic007G050200 Sobic001G379400--Sobic006G089000 Sobic010G147200 Sobic010G147200 Sobic001G379400--Sobic010G147200 Sobic005G160700 Sobic005G160700 Sobic001G379400--Sobic005G160700 Sobic006G277700 Sobic006G277700 Sobic001G379400--Sobic006G277700 Sobic006G079300 Sobic006G079300 Sobic001G379400--Sobic006G079300 Sobic001G234900 Sobic001G234900 Sobic001G379400--Sobic001G234900 Sobic003G337600 Sobic003G337600 Sobic001G379400--Sobic003G337600 Sobic006G174300 Sobic006G174300 Sobic001G379400--Sobic006G174300 Sobic006G003100 Sobic006G003100 Sobic001G379400--Sobic006G003100 Sobic003G119500--Sobic010G212500 Sobic003G119500--Sobic003G311800 Sobic003G119500--Sobic002G003800 Sobic003G119500--Sobic009G109000 Sobic001G049900 Sobic001G049900 Sobic003G119500--Sobic001G049900 Sobic006G274933 Sobic006G274933 Sobic003G119500--Sobic006G274933 Sobic003G119500--Sobic004G348800 Sobic003G119500--Sobic004G297900 Sobic010G085800 Sobic010G085800 Sobic003G119500--Sobic010G085800 Sobic001G242100 Sobic001G242100 Sobic002G301900--Sobic001G242100 Sobic002G301900--Sobic010G045500 Sobic001G502000 Sobic001G502000 Sobic002G301900--Sobic001G502000 Sobic006G170600 Sobic006G170600 Sobic002G301900--Sobic006G170600 Sobic003G400900 Sobic003G400900 Sobic002G301900--Sobic003G400900 Sobic005G222500 Sobic005G222500 Sobic002G301900--Sobic005G222500 Sobic004G299600 Sobic004G299600 Sobic002G301900--Sobic004G299600 Sobic002G183700 Sobic002G183700 Sobic002G301900--Sobic002G183700 Sobic004G180700 Sobic004G180700 Sobic002G301900--Sobic004G180700 Sobic010G045500--Sobic001G242100 Sobic010G045500--Sobic002G301900 Sobic006G234466 Sobic006G234466 Sobic010G045500--Sobic006G234466 Sobic010G045500--Sobic004G180700 Sobic010G045500--Sobic005G215400 Sobic010G045500--Sobic004G322800 Sobic010G270700 Sobic010G270700 Sobic010G045500--Sobic010G270700 Sobic004G301600 Sobic004G301600 Sobic010G045500--Sobic004G301600 Sobic008G128200 Sobic008G128200 Sobic010G045500--Sobic008G128200 Sobic007G158800 Sobic007G158800 Sobic006G089000--Sobic007G158800 Sobic006G089000--Sobic001G502000 Sobic006G089000--Sobic002G183700 Sobic006G089000--Sobic001G379400 Sobic001G261509 Sobic001G261509 Sobic006G089000--Sobic001G261509 Sobic006G089000--Sobic004G297900 Sobic001G229000 Sobic001G229000 Sobic006G089000--Sobic001G229000 Sobic004G322100 Sobic004G322100 Sobic006G089000--Sobic004G322100 Sobic001G238300 Sobic001G238300 Sobic006G089000--Sobic001G238300 Sobic004G297900--Sobic003G311800 Sobic008G009400 Sobic008G009400 Sobic004G297900--Sobic008G009400 Sobic006G235200 Sobic006G235200 Sobic004G297900--Sobic006G235200 Sobic004G297900--Sobic001G238300 Sobic004G295100 Sobic004G295100 Sobic004G297900--Sobic004G295100 Sobic001G300500 Sobic001G300500 Sobic004G297900--Sobic001G300500 Sobic004G297900--Sobic009G109000 Sobic004G297900--Sobic002G261500 SobicK026900 SobicK026900 Sobic004G297900--SobicK026900
Octagon: transcription factors


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