Gene annotation
Transcriptome id Sobic.010G267100.1
Synonym Sb10g030210
Functional annotation zinc finger family protein, putative, expressed
UniProt A0A194YLR3
Pfam PF14624 PF13519
Panther DB PTHR10579 PTHR10579:SF48
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G08050 : Zinc finger (C3HC4-type RING finger) family protein
RAP-DB (Rice) LOC_Os03g28990.1 : zinc finger family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G432700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.004G302200 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsSAUR11 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
3 Sobic.003G360200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@homeobox domain containing protein, expressed -
4 Sobic.010G192900 expressed protein -
5 Sobic.007G108700 expressed protein -
6 Sobic.002G356500 expressed protein -
7 Sobic.003G125500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@TKL_IRAK_CR4L.2 - The CR4L subfamily has homology with Crinkly4, expressed -
8 Sobic.006G009000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger family protein, putative, expressed -
9 Sobic.003G024900 carnitine racemase like protein, putative, expressed -
10 Sobic.001G108800 expressed protein -
11 Sobic.010G267200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WD40-like Beta Propeller Repeat family protein, expressed -
12 Sobic.006G122800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
13 Sobic.002G024000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like receptor kinase, putative, expressed -
14 Sobic.009G065300 expressed protein -
15 Sobic.002G424800 tyrosine protein kinase domain containing protein, putative, expressed -
16 Sobic.007G127100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
17 Sobic.006G068800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family protein, putative, expressed -
18 Sobic.002G232700 clathrin assembly protein, putative, expressed -
19 Sobic.004G286000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
20 Sobic.002G334200 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -


Gene co-expression network
sample Sobic010G267100 Sobic010G267100 Sobic001G432700 Sobic001G432700 Sobic010G267100--Sobic001G432700 Sobic004G302200 Sobic004G302200 Sobic010G267100--Sobic004G302200 Sobic003G360200 Sobic003G360200 Sobic010G267100--Sobic003G360200 Sobic010G192900 Sobic010G192900 Sobic010G267100--Sobic010G192900 Sobic007G108700 Sobic007G108700 Sobic010G267100--Sobic007G108700 Sobic002G356500 Sobic002G356500 Sobic010G267100--Sobic002G356500 Sobic003G125500 Sobic003G125500 Sobic010G267100--Sobic003G125500 Sobic006G009000 Sobic006G009000 Sobic010G267100--Sobic006G009000 Sobic003G024900 Sobic003G024900 Sobic010G267100--Sobic003G024900 Sobic002G407100 Sobic002G407100 Sobic001G432700--Sobic002G407100 Sobic007G127100 Sobic007G127100 Sobic001G432700--Sobic007G127100 Sobic001G403300 Sobic001G403300 Sobic001G432700--Sobic001G403300 Sobic006G068800 Sobic006G068800 Sobic001G432700--Sobic006G068800 Sobic009G065300 Sobic009G065300 Sobic001G432700--Sobic009G065300 Sobic010G195500 Sobic010G195500 Sobic001G432700--Sobic010G195500 Sobic005G080200 Sobic005G080200 Sobic001G432700--Sobic005G080200 Sobic002G327300 Sobic002G327300 Sobic001G432700--Sobic002G327300 Sobic001G432700--Sobic004G302200 Sobic010G136000 Sobic010G136000 Sobic004G302200--Sobic010G136000 Sobic003G320800 Sobic003G320800 Sobic004G302200--Sobic003G320800 Sobic010G268400 Sobic010G268400 Sobic004G302200--Sobic010G268400 Sobic004G302200--Sobic001G432700 Sobic003G135700 Sobic003G135700 Sobic004G302200--Sobic003G135700 Sobic004G302200--Sobic002G407100 Sobic002G319500 Sobic002G319500 Sobic004G302200--Sobic002G319500 Sobic002G373001 Sobic002G373001 Sobic004G302200--Sobic002G373001 Sobic004G302200--Sobic009G065300 Sobic003G360200--Sobic007G127100 Sobic003G360200--Sobic006G009000 Sobic003G360200--Sobic009G065300 Sobic003G416300 Sobic003G416300 Sobic003G360200--Sobic003G416300 Sobic003G360200--Sobic001G432700 Sobic006G246100 Sobic006G246100 Sobic003G360200--Sobic006G246100 Sobic003G360200--Sobic002G327300 Sobic007G115500 Sobic007G115500 Sobic003G360200--Sobic007G115500 Sobic003G360200--Sobic003G135700 Sobic010G192900--Sobic006G068800 Sobic002G327100 Sobic002G327100 Sobic010G192900--Sobic002G327100 Sobic003G037500 Sobic003G037500 Sobic010G192900--Sobic003G037500 Sobic004G297900 Sobic004G297900 Sobic010G192900--Sobic004G297900 Sobic010G192900--Sobic006G009000 Sobic006G009100 Sobic006G009100 Sobic010G192900--Sobic006G009100 Sobic003G228200 Sobic003G228200 Sobic010G192900--Sobic003G228200 Sobic006G255400 Sobic006G255400 Sobic010G192900--Sobic006G255400 Sobic003G311800 Sobic003G311800 Sobic010G192900--Sobic003G311800 Sobic004G011100 Sobic004G011100 Sobic007G108700--Sobic004G011100 Sobic003G139300 Sobic003G139300 Sobic007G108700--Sobic003G139300 Sobic003G368600 Sobic003G368600 Sobic007G108700--Sobic003G368600 Sobic001G021900 Sobic001G021900 Sobic007G108700--Sobic001G021900 Sobic007G108700--Sobic002G356500 Sobic001G075300 Sobic001G075300 Sobic007G108700--Sobic001G075300 Sobic002G235500 Sobic002G235500 Sobic007G108700--Sobic002G235500 Sobic010G204200 Sobic010G204200 Sobic007G108700--Sobic010G204200 Sobic007G108700--Sobic003G024900 Sobic009G183800 Sobic009G183800 Sobic002G356500--Sobic009G183800 Sobic002G356500--Sobic007G108700 Sobic005G228400 Sobic005G228400 Sobic002G356500--Sobic005G228400 Sobic008G019900 Sobic008G019900 Sobic002G356500--Sobic008G019900 Sobic002G281100 Sobic002G281100 Sobic002G356500--Sobic002G281100 Sobic001G062500 Sobic001G062500 Sobic002G356500--Sobic001G062500 Sobic002G218800 Sobic002G218800 Sobic002G356500--Sobic002G218800 Sobic004G046400 Sobic004G046400 Sobic002G356500--Sobic004G046400 Sobic009G035900 Sobic009G035900 Sobic002G356500--Sobic009G035900 Sobic003G125500--Sobic010G267100 Sobic010G122400 Sobic010G122400 Sobic003G125500--Sobic010G122400 Sobic004G251100 Sobic004G251100 Sobic003G125500--Sobic004G251100 Sobic003G253200 Sobic003G253200 Sobic003G125500--Sobic003G253200 Sobic003G125500--Sobic003G024900 Sobic002G024000 Sobic002G024000 Sobic003G125500--Sobic002G024000 Sobic006G058400 Sobic006G058400 Sobic003G125500--Sobic006G058400 Sobic010G099000 Sobic010G099000 Sobic003G125500--Sobic010G099000 Sobic001G319200 Sobic001G319200 Sobic003G125500--Sobic001G319200 Sobic006G009000--Sobic006G009100 Sobic006G009000--Sobic010G192900 Sobic006G009000--Sobic002G327100 Sobic006G009000--Sobic009G065300 Sobic006G009000--Sobic006G255400 Sobic006G009000--Sobic007G127100 Sobic006G050800 Sobic006G050800 Sobic006G009000--Sobic006G050800 Sobic006G009000--Sobic006G068800 Sobic006G009000--Sobic003G360200 Sobic002G311300 Sobic002G311300 Sobic003G024900--Sobic002G311300 Sobic003G024900--Sobic002G235500 Sobic003G024900--Sobic007G108700 Sobic002G348500 Sobic002G348500 Sobic003G024900--Sobic002G348500 Sobic004G287000 Sobic004G287000 Sobic003G024900--Sobic004G287000 Sobic003G212300 Sobic003G212300 Sobic003G024900--Sobic003G212300 Sobic001G108800 Sobic001G108800 Sobic003G024900--Sobic001G108800 Sobic005G013600 Sobic005G013600 Sobic003G024900--Sobic005G013600 Sobic003G024900--Sobic001G021900
Octagon: transcription factors


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