Gene annotation
Transcriptome id Sobic.003G125500.1
Synonym Sb03g010610
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
TKL_IRAK_CR4L.2 - The CR4L subfamily has homology with Crinkly4, expressed
UniProt A0A1B6Q2T1
Pfam PF00069
Panther DB PTHR27001 PTHR27001:SF158
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G51990 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os01g16230.1 : TKL_IRAK_CR4L.2 - The CR4L subfamily has homology with Crinkly4, expressed
MaizeGDB (Corn) Zm00025a035251 , Zm00025a024002 , Zm00025a043529 , Zm00025a037066
Brachypodium KQK03818
Barley HORVU1Hr1G056600.3 , HORVU1Hr1G056600.1 , HORVU3Hr1G038000.1
Wheat TraesCS1D02G242000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G267100 zinc finger family protein, putative, expressed -
2 Sobic.010G122400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cadmium tolerance factor, putative, expressed -
3 Sobic.004G251100 RING finger protein, putative, expressed -
4 Sobic.003G253200 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
5 Sobic.003G024900 carnitine racemase like protein, putative, expressed -
6 Sobic.002G024000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like receptor kinase, putative, expressed -
7 Sobic.006G058400 Trihelix Family(PubMedID : 24864043)@transcription factor, putative, expressed -
8 Sobic.010G099000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@spotted leaf 11, putative, expressed -
9 Sobic.001G319200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
10 Sobic.004G112400 plant protein of unknown function domain containing protein, expressed -
11 Sobic.009G182500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.001G398000 GCRP7 - Glycine and cysteine rich family protein precursor, expressed -
13 Sobic.007G045000 expressed protein -
14 Sobic.001G432700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.003G079466 - -
16 Sobic.002G350901 - -
17 Sobic.006G246100 one cut domain family member 3, putative, expressed -
18 Sobic.010G194300 VQ domain containing protein, putative, expressed -
19 Sobic.003G360200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@homeobox domain containing protein, expressed -
20 Sobic.007G125100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic003G125500 Sobic003G125500 Sobic010G267100 Sobic010G267100 Sobic003G125500--Sobic010G267100 Sobic010G122400 Sobic010G122400 Sobic003G125500--Sobic010G122400 Sobic004G251100 Sobic004G251100 Sobic003G125500--Sobic004G251100 Sobic003G253200 Sobic003G253200 Sobic003G125500--Sobic003G253200 Sobic003G024900 Sobic003G024900 Sobic003G125500--Sobic003G024900 Sobic002G024000 Sobic002G024000 Sobic003G125500--Sobic002G024000 Sobic006G058400 Sobic006G058400 Sobic003G125500--Sobic006G058400 Sobic010G099000 Sobic010G099000 Sobic003G125500--Sobic010G099000 Sobic001G319200 Sobic001G319200 Sobic003G125500--Sobic001G319200 Sobic001G432700 Sobic001G432700 Sobic010G267100--Sobic001G432700 Sobic004G302200 Sobic004G302200 Sobic010G267100--Sobic004G302200 Sobic003G360200 Sobic003G360200 Sobic010G267100--Sobic003G360200 Sobic010G192900 Sobic010G192900 Sobic010G267100--Sobic010G192900 Sobic007G108700 Sobic007G108700 Sobic010G267100--Sobic007G108700 Sobic002G356500 Sobic002G356500 Sobic010G267100--Sobic002G356500 Sobic010G267100--Sobic003G125500 Sobic006G009000 Sobic006G009000 Sobic010G267100--Sobic006G009000 Sobic010G267100--Sobic003G024900 Sobic010G122400--Sobic003G125500 Sobic001G330925 Sobic001G330925 Sobic010G122400--Sobic001G330925 Sobic004G112400 Sobic004G112400 Sobic010G122400--Sobic004G112400 Sobic010G122400--Sobic010G267100 Sobic006G021900 Sobic006G021900 Sobic010G122400--Sobic006G021900 Sobic003G428900 Sobic003G428900 Sobic010G122400--Sobic003G428900 Sobic001G261600 Sobic001G261600 Sobic010G122400--Sobic001G261600 Sobic001G331000 Sobic001G331000 Sobic010G122400--Sobic001G331000 Sobic002G067300 Sobic002G067300 Sobic010G122400--Sobic002G067300 Sobic004G287000 Sobic004G287000 Sobic004G251100--Sobic004G287000 Sobic003G288000 Sobic003G288000 Sobic004G251100--Sobic003G288000 Sobic008G158200 Sobic008G158200 Sobic004G251100--Sobic008G158200 Sobic004G251100--Sobic003G125500 Sobic004G195000 Sobic004G195000 Sobic004G251100--Sobic004G195000 Sobic004G245500 Sobic004G245500 Sobic004G251100--Sobic004G245500 Sobic008G050500 Sobic008G050500 Sobic004G251100--Sobic008G050500 Sobic002G128300 Sobic002G128300 Sobic004G251100--Sobic002G128300 Sobic001G354200 Sobic001G354200 Sobic004G251100--Sobic001G354200 Sobic003G253200--Sobic001G319200 Sobic002G214500 Sobic002G214500 Sobic003G253200--Sobic002G214500 Sobic006G274500 Sobic006G274500 Sobic003G253200--Sobic006G274500 Sobic010G275001 Sobic010G275001 Sobic003G253200--Sobic010G275001 Sobic003G253200--Sobic001G331000 Sobic004G333300 Sobic004G333300 Sobic003G253200--Sobic004G333300 Sobic001G156600 Sobic001G156600 Sobic003G253200--Sobic001G156600 Sobic003G253200--Sobic003G125500 Sobic009G115600 Sobic009G115600 Sobic003G253200--Sobic009G115600 Sobic002G311300 Sobic002G311300 Sobic003G024900--Sobic002G311300 Sobic002G235500 Sobic002G235500 Sobic003G024900--Sobic002G235500 Sobic003G024900--Sobic007G108700 Sobic002G348500 Sobic002G348500 Sobic003G024900--Sobic002G348500 Sobic003G024900--Sobic004G287000 Sobic003G212300 Sobic003G212300 Sobic003G024900--Sobic003G212300 Sobic001G108800 Sobic001G108800 Sobic003G024900--Sobic001G108800 Sobic005G013600 Sobic005G013600 Sobic003G024900--Sobic005G013600 Sobic001G021900 Sobic001G021900 Sobic003G024900--Sobic001G021900 Sobic002G024000--Sobic010G192900 Sobic003G417100 Sobic003G417100 Sobic002G024000--Sobic003G417100 Sobic006G068800 Sobic006G068800 Sobic002G024000--Sobic006G068800 Sobic007G115500 Sobic007G115500 Sobic002G024000--Sobic007G115500 Sobic010G194100 Sobic010G194100 Sobic002G024000--Sobic010G194100 Sobic002G361200 Sobic002G361200 Sobic002G024000--Sobic002G361200 Sobic002G024000--Sobic006G009000 Sobic009G171600 Sobic009G171600 Sobic002G024000--Sobic009G171600 Sobic003G228200 Sobic003G228200 Sobic002G024000--Sobic003G228200 Sobic008G042300 Sobic008G042300 Sobic006G058400--Sobic008G042300 Sobic010G192700 Sobic010G192700 Sobic006G058400--Sobic010G192700 Sobic003G363600 Sobic003G363600 Sobic006G058400--Sobic003G363600 Sobic004G341600 Sobic004G341600 Sobic006G058400--Sobic004G341600 Sobic002G153600 Sobic002G153600 Sobic006G058400--Sobic002G153600 Sobic004G157700 Sobic004G157700 Sobic006G058400--Sobic004G157700 Sobic004G299300 Sobic004G299300 Sobic006G058400--Sobic004G299300 Sobic009G027200 Sobic009G027200 Sobic006G058400--Sobic009G027200 Sobic009G105500 Sobic009G105500 Sobic006G058400--Sobic009G105500 Sobic009G067400 Sobic009G067400 Sobic010G099000--Sobic009G067400 Sobic008G018600 Sobic008G018600 Sobic010G099000--Sobic008G018600 Sobic002G407200 Sobic002G407200 Sobic010G099000--Sobic002G407200 Sobic009G216050 Sobic009G216050 Sobic010G099000--Sobic009G216050 Sobic001G314800 Sobic001G314800 Sobic010G099000--Sobic001G314800 Sobic006G113000 Sobic006G113000 Sobic010G099000--Sobic006G113000 Sobic001G195100 Sobic001G195100 Sobic010G099000--Sobic001G195100 Sobic003G310500 Sobic003G310500 Sobic010G099000--Sobic003G310500 Sobic008G181300 Sobic008G181300 Sobic010G099000--Sobic008G181300 Sobic001G319200--Sobic004G195000 Sobic005G080200 Sobic005G080200 Sobic001G319200--Sobic005G080200 Sobic006G246100 Sobic006G246100 Sobic001G319200--Sobic006G246100 Sobic001G319200--Sobic006G113000 Sobic001G319200--Sobic002G067300 Sobic001G319200--Sobic001G432700 Sobic010G194300 Sobic010G194300 Sobic001G319200--Sobic010G194300 Sobic001G319200--Sobic010G192900 Sobic001G319200--Sobic003G360200
Octagon: transcription factors


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