Gene annotation
Transcriptome id Sobic.010G122400.5,Sobic.010G122400.4,Sobic.010G122400.6
Synonym Sb10g010780
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
cadmium tolerance factor, putative, expressed
UniProt A0A1W0VSL3 , C5Z904
Pfam PF13962
Panther DB PTHR24177 PTHR24177:SF43
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G11000 : Ankyrin repeat family protein
RAP-DB (Rice) LOC_Os06g18900.1 : cadmium tolerance factor, putative, expressed
MaizeGDB (Corn) Zm00025a042765
Brachypodium KQK18560
Barley HORVU7Hr1G044020.7 , HORVU7Hr1G044020.6 , HORVU7Hr1G044020.5 , HORVU7Hr1G044020.4 , HORVU7Hr1G044020.3 , HORVU7Hr1G044020.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G125500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@TKL_IRAK_CR4L.2 - The CR4L subfamily has homology with Crinkly4, expressed -
2 Sobic.001G330925 - -
3 Sobic.004G112400 plant protein of unknown function domain containing protein, expressed -
4 Sobic.010G267100 zinc finger family protein, putative, expressed -
5 Sobic.006G021900 Multidrug resistence-associated protein 4(PubMedID : 26320239)@ABC transporter family protein, putative, expressed K05665: ATP-binding cassette, subfamily C (CFTR/MRP), member 1
6 Sobic.003G428900 C2 domain containing protein, putative, expressed -
7 Sobic.001G261600 cellulase, putative, expressed -
8 Sobic.001G331000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.002G067300 ATPase, putative, expressed -
10 Sobic.003G360200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@homeobox domain containing protein, expressed -
11 Sobic.006G031200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DSBA-like thioredoxin domain containing protein, expressed -
12 Sobic.001G471100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K10206: LL-diaminopimelate aminotransferase
13 Sobic.010G224600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR26 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
14 Sobic.006G009600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.010G193200 expressed protein -
16 Sobic.006G228200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like kinase, putative, expressed -
17 Sobic.002G214500 major ampullate spidroin 2, putative, expressed -
18 Sobic.008G095100 SAM domain containing protein, putative, expressed -
19 Sobic.005G093400 expressed protein -
20 Sobic.001G156600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cysteine-rich receptor-like protein kinase 8 precursor, putative, expressed -


Gene co-expression network
sample Sobic010G122400 Sobic010G122400 Sobic003G125500 Sobic003G125500 Sobic010G122400--Sobic003G125500 Sobic001G330925 Sobic001G330925 Sobic010G122400--Sobic001G330925 Sobic004G112400 Sobic004G112400 Sobic010G122400--Sobic004G112400 Sobic010G267100 Sobic010G267100 Sobic010G122400--Sobic010G267100 Sobic006G021900 Sobic006G021900 Sobic010G122400--Sobic006G021900 Sobic003G428900 Sobic003G428900 Sobic010G122400--Sobic003G428900 Sobic001G261600 Sobic001G261600 Sobic010G122400--Sobic001G261600 Sobic001G331000 Sobic001G331000 Sobic010G122400--Sobic001G331000 Sobic002G067300 Sobic002G067300 Sobic010G122400--Sobic002G067300 Sobic003G125500--Sobic010G267100 Sobic003G125500--Sobic010G122400 Sobic004G251100 Sobic004G251100 Sobic003G125500--Sobic004G251100 Sobic003G253200 Sobic003G253200 Sobic003G125500--Sobic003G253200 Sobic003G024900 Sobic003G024900 Sobic003G125500--Sobic003G024900 Sobic002G024000 Sobic002G024000 Sobic003G125500--Sobic002G024000 Sobic006G058400 Sobic006G058400 Sobic003G125500--Sobic006G058400 Sobic010G099000 Sobic010G099000 Sobic003G125500--Sobic010G099000 Sobic001G319200 Sobic001G319200 Sobic003G125500--Sobic001G319200 Sobic004G138400 Sobic004G138400 Sobic001G330925--Sobic004G138400 Sobic002G202800 Sobic002G202800 Sobic001G330925--Sobic002G202800 Sobic009G115500 Sobic009G115500 Sobic001G330925--Sobic009G115500 Sobic002G214500 Sobic002G214500 Sobic001G330925--Sobic002G214500 Sobic003G401500 Sobic003G401500 Sobic001G330925--Sobic003G401500 Sobic003G242800 Sobic003G242800 Sobic001G330925--Sobic003G242800 Sobic003G325100 Sobic003G325100 Sobic001G330925--Sobic003G325100 Sobic003G258700 Sobic003G258700 Sobic001G330925--Sobic003G258700 Sobic002G354400 Sobic002G354400 Sobic001G330925--Sobic002G354400 Sobic002G418500 Sobic002G418500 Sobic004G112400--Sobic002G418500 Sobic001G339300 Sobic001G339300 Sobic004G112400--Sobic001G339300 Sobic001G339200 Sobic001G339200 Sobic004G112400--Sobic001G339200 Sobic004G181300 Sobic004G181300 Sobic004G112400--Sobic004G181300 Sobic010G275001 Sobic010G275001 Sobic004G112400--Sobic010G275001 Sobic002G249600 Sobic002G249600 Sobic004G112400--Sobic002G249600 Sobic006G190000 Sobic006G190000 Sobic004G112400--Sobic006G190000 Sobic008G070900 Sobic008G070900 Sobic004G112400--Sobic008G070900 Sobic004G112400--Sobic003G325100 Sobic001G432700 Sobic001G432700 Sobic010G267100--Sobic001G432700 Sobic004G302200 Sobic004G302200 Sobic010G267100--Sobic004G302200 Sobic003G360200 Sobic003G360200 Sobic010G267100--Sobic003G360200 Sobic010G192900 Sobic010G192900 Sobic010G267100--Sobic010G192900 Sobic007G108700 Sobic007G108700 Sobic010G267100--Sobic007G108700 Sobic002G356500 Sobic002G356500 Sobic010G267100--Sobic002G356500 Sobic010G267100--Sobic003G125500 Sobic006G009000 Sobic006G009000 Sobic010G267100--Sobic006G009000 Sobic010G267100--Sobic003G024900 Sobic005G093400 Sobic005G093400 Sobic006G021900--Sobic005G093400 Sobic005G021950 Sobic005G021950 Sobic006G021900--Sobic005G021950 Sobic006G021900--Sobic001G261600 Sobic006G021900--Sobic002G067300 Sobic001G410450 Sobic001G410450 Sobic006G021900--Sobic001G410450 Sobic007G129201 Sobic007G129201 Sobic006G021900--Sobic007G129201 Sobic009G181300 Sobic009G181300 Sobic006G021900--Sobic009G181300 Sobic008G074500 Sobic008G074500 Sobic006G021900--Sobic008G074500 Sobic009G252100 Sobic009G252100 Sobic006G021900--Sobic009G252100 Sobic010G267200 Sobic010G267200 Sobic003G428900--Sobic010G267200 Sobic003G053600 Sobic003G053600 Sobic003G428900--Sobic003G053600 Sobic004G177000 Sobic004G177000 Sobic003G428900--Sobic004G177000 Sobic009G162300 Sobic009G162300 Sobic003G428900--Sobic009G162300 Sobic010G001300 Sobic010G001300 Sobic003G428900--Sobic010G001300 Sobic003G353200 Sobic003G353200 Sobic003G428900--Sobic003G353200 Sobic008G164450 Sobic008G164450 Sobic003G428900--Sobic008G164450 Sobic002G311501 Sobic002G311501 Sobic003G428900--Sobic002G311501 Sobic004G047600 Sobic004G047600 Sobic003G428900--Sobic004G047600 Sobic001G261600--Sobic006G021900 Sobic005G171100 Sobic005G171100 Sobic001G261600--Sobic005G171100 Sobic008G146700 Sobic008G146700 Sobic001G261600--Sobic008G146700 Sobic001G261600--Sobic005G093400 Sobic008G182900 Sobic008G182900 Sobic001G261600--Sobic008G182900 Sobic008G142100 Sobic008G142100 Sobic001G261600--Sobic008G142100 Sobic010G045000 Sobic010G045000 Sobic001G261600--Sobic010G045000 Sobic003G031100 Sobic003G031100 Sobic001G261600--Sobic003G031100 Sobic001G319100 Sobic001G319100 Sobic001G261600--Sobic001G319100 Sobic006G228200 Sobic006G228200 Sobic001G331000--Sobic006G228200 Sobic007G158500 Sobic007G158500 Sobic001G331000--Sobic007G158500 Sobic001G331000--Sobic002G067300 Sobic006G031200 Sobic006G031200 Sobic001G331000--Sobic006G031200 Sobic001G331000--Sobic006G021900 Sobic001G331000--Sobic002G214500 Sobic001G331000--Sobic003G428900 Sobic004G167300 Sobic004G167300 Sobic001G331000--Sobic004G167300 Sobic006G274500 Sobic006G274500 Sobic001G331000--Sobic006G274500 Sobic006G113000 Sobic006G113000 Sobic002G067300--Sobic006G113000 Sobic002G067300--Sobic001G319200 Sobic007G115500 Sobic007G115500 Sobic002G067300--Sobic007G115500 Sobic002G067300--Sobic006G021900 Sobic002G067300--Sobic003G360200 Sobic002G067300--Sobic006G009000 Sobic002G067300--Sobic002G024000 Sobic002G067300--Sobic006G031200 Sobic005G161100 Sobic005G161100 Sobic002G067300--Sobic005G161100
Octagon: transcription factors


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