Gene annotation
Transcriptome id Sobic.001G156600.1
Synonym Sb01g013650
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
cysteine-rich receptor-like protein kinase 8 precursor, putative, expressed
UniProt A0A1B6QJ53
Pfam PF01657 PF00069
Panther DB PTHR27007 PTHR27007:SF62
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G10530 : Concanavalin A-like lectin protein kinase family protein
RAP-DB (Rice) LOC_Os12g41530.1 : cysteine-rich receptor-like protein kinase 8 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a011901 , Zm00025a050089
Brachypodium KQK16342 , PNT68023 , KQJ85897
Barley HORVU2Hr1G125230.5 , HORVU2Hr1G125230.4 , HORVU2Hr1G125230.6 , HORVU2Hr1G125230.1 , HORVU2Hr1G125230.2 , HORVU7Hr1G114610.2 , HORVU7Hr1G114610.3 , HORVU7Hr1G114610.1 , HORVU7Hr1G114610.6 , HORVU7Hr1G114610.7 , HORVU7Hr1G114610.4 , HORVU7Hr1G114610.5
Wheat TraesCS3D02G430500 , TraesCS4B02G053100 , TraesCS4A02G394200 , TraesCS1A02G383900 , TraesCS4B02G053500 , TraesCS1D02G392100 , TraesCS1D02G392100 , TraesCS4D02G325500 , TraesCS5D02G062200 , TraesCS7A02G139100 , TraesCS5B02G456500 , TraesCS4B02G328400 , TraesCS5A02G500100 , TraesCS7B02G041100 , TraesCS3A02G438300 , TraesCS1B02G410600 , TraesCSU02G199000 , TraesCS2D02G020100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G253200 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
2 Sobic.007G059000 - -
3 Sobic.007G158500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@patatin, putative, expressed -
4 Sobic.001G251650 - -
5 Sobic.006G274500 plant-specific domain TIGR01627 family protein, expressed -
6 Sobic.001G330925 - -
7 Sobic.001G331000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.003G138100 tetratricopeptide repeat, putative, expressed -
9 Sobic.002G214500 major ampullate spidroin 2, putative, expressed -
10 Sobic.002G386200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
11 Sobic.009G121600 cytochrome P450 86A2, putative, expressed -
12 Sobic.005G041000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
13 Sobic.003G138400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY9, expressed -
14 Sobic.002G241250 - -
15 Sobic.010G018300 expressed protein -
16 Sobic.009G251800 inactive receptor kinase At2g26730 precursor, putative, expressed -
17 Sobic.003G037100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.001G071300 expressed protein -
19 Sobic.009G227800 membrane attack complex component/perforin/complement C9, putative, expressed -
20 Sobic.006G009600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G156600 Sobic001G156600 Sobic003G253200 Sobic003G253200 Sobic001G156600--Sobic003G253200 Sobic007G059000 Sobic007G059000 Sobic001G156600--Sobic007G059000 Sobic007G158500 Sobic007G158500 Sobic001G156600--Sobic007G158500 Sobic001G251650 Sobic001G251650 Sobic001G156600--Sobic001G251650 Sobic006G274500 Sobic006G274500 Sobic001G156600--Sobic006G274500 Sobic001G330925 Sobic001G330925 Sobic001G156600--Sobic001G330925 Sobic001G331000 Sobic001G331000 Sobic001G156600--Sobic001G331000 Sobic003G138100 Sobic003G138100 Sobic001G156600--Sobic003G138100 Sobic002G214500 Sobic002G214500 Sobic001G156600--Sobic002G214500 Sobic001G319200 Sobic001G319200 Sobic003G253200--Sobic001G319200 Sobic003G253200--Sobic002G214500 Sobic003G253200--Sobic006G274500 Sobic010G275001 Sobic010G275001 Sobic003G253200--Sobic010G275001 Sobic003G253200--Sobic001G331000 Sobic004G333300 Sobic004G333300 Sobic003G253200--Sobic004G333300 Sobic003G253200--Sobic001G156600 Sobic003G125500 Sobic003G125500 Sobic003G253200--Sobic003G125500 Sobic009G115600 Sobic009G115600 Sobic003G253200--Sobic009G115600 Sobic007G059000--Sobic001G251650 Sobic001G259500 Sobic001G259500 Sobic007G059000--Sobic001G259500 Sobic005G019350 Sobic005G019350 Sobic007G059000--Sobic005G019350 Sobic005G041000 Sobic005G041000 Sobic007G059000--Sobic005G041000 Sobic003G037100 Sobic003G037100 Sobic007G059000--Sobic003G037100 Sobic009G171600 Sobic009G171600 Sobic007G158500--Sobic009G171600 Sobic010G018300 Sobic010G018300 Sobic007G158500--Sobic010G018300 Sobic002G386200 Sobic002G386200 Sobic007G158500--Sobic002G386200 Sobic007G158500--Sobic001G331000 Sobic007G158500--Sobic001G319200 Sobic009G034800 Sobic009G034800 Sobic007G158500--Sobic009G034800 Sobic004G167300 Sobic004G167300 Sobic007G158500--Sobic004G167300 Sobic001G146400 Sobic001G146400 Sobic007G158500--Sobic001G146400 Sobic009G067400 Sobic009G067400 Sobic007G158500--Sobic009G067400 Sobic004G071300 Sobic004G071300 Sobic001G251650--Sobic004G071300 Sobic010G174600 Sobic010G174600 Sobic001G251650--Sobic010G174600 Sobic001G515900 Sobic001G515900 Sobic001G251650--Sobic001G515900 Sobic010G077275 Sobic010G077275 Sobic001G251650--Sobic010G077275 Sobic001G471150 Sobic001G471150 Sobic001G251650--Sobic001G471150 Sobic001G352100 Sobic001G352100 Sobic001G251650--Sobic001G352100 Sobic001G251650--Sobic005G019350 Sobic001G251650--Sobic007G059000 Sobic006G218950 Sobic006G218950 Sobic001G251650--Sobic006G218950 Sobic008G081400 Sobic008G081400 Sobic006G274500--Sobic008G081400 Sobic009G181300 Sobic009G181300 Sobic006G274500--Sobic009G181300 Sobic003G385500 Sobic003G385500 Sobic006G274500--Sobic003G385500 Sobic006G274500--Sobic003G253200 Sobic004G209500 Sobic004G209500 Sobic006G274500--Sobic004G209500 Sobic003G003000 Sobic003G003000 Sobic006G274500--Sobic003G003000 Sobic006G274500--Sobic001G331000 Sobic003G016400 Sobic003G016400 Sobic006G274500--Sobic003G016400 Sobic008G008300 Sobic008G008300 Sobic006G274500--Sobic008G008300 Sobic004G138400 Sobic004G138400 Sobic001G330925--Sobic004G138400 Sobic002G202800 Sobic002G202800 Sobic001G330925--Sobic002G202800 Sobic009G115500 Sobic009G115500 Sobic001G330925--Sobic009G115500 Sobic001G330925--Sobic002G214500 Sobic003G401500 Sobic003G401500 Sobic001G330925--Sobic003G401500 Sobic003G242800 Sobic003G242800 Sobic001G330925--Sobic003G242800 Sobic003G325100 Sobic003G325100 Sobic001G330925--Sobic003G325100 Sobic003G258700 Sobic003G258700 Sobic001G330925--Sobic003G258700 Sobic002G354400 Sobic002G354400 Sobic001G330925--Sobic002G354400 Sobic006G228200 Sobic006G228200 Sobic001G331000--Sobic006G228200 Sobic001G331000--Sobic007G158500 Sobic002G067300 Sobic002G067300 Sobic001G331000--Sobic002G067300 Sobic006G031200 Sobic006G031200 Sobic001G331000--Sobic006G031200 Sobic006G021900 Sobic006G021900 Sobic001G331000--Sobic006G021900 Sobic001G331000--Sobic002G214500 Sobic003G428900 Sobic003G428900 Sobic001G331000--Sobic003G428900 Sobic001G331000--Sobic004G167300 Sobic001G331000--Sobic006G274500 Sobic003G138100--Sobic001G259500 Sobic009G241500 Sobic009G241500 Sobic003G138100--Sobic009G241500 Sobic002G269032 Sobic002G269032 Sobic003G138100--Sobic002G269032 Sobic004G052500 Sobic004G052500 Sobic003G138100--Sobic004G052500 Sobic001G146500 Sobic001G146500 Sobic003G138100--Sobic001G146500 Sobic002G214500--Sobic010G018300 Sobic005G226100 Sobic005G226100 Sobic002G214500--Sobic005G226100 Sobic010G131600 Sobic010G131600 Sobic002G214500--Sobic010G131600 Sobic002G214500--Sobic003G037100 Sobic009G121600 Sobic009G121600 Sobic002G214500--Sobic009G121600 Sobic002G214500--Sobic001G330925 Sobic002G214500--Sobic009G067400 Sobic008G070900 Sobic008G070900 Sobic002G214500--Sobic008G070900 Sobic002G214500--Sobic001G146500
Octagon: transcription factors


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