Gene annotation
Transcriptome id Sobic.006G274500.1
Synonym Sb06g033590
Functional annotation plant-specific domain TIGR01627 family protein, expressed
UniProt A0A1Z5RGV2
Pfam PF04669
Panther DB PTHR31444 PTHR31444:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G24910 : Protein of unknown function (DUF579)
RAP-DB (Rice) LOC_Os11g29680.1 : expressed protein
MaizeGDB (Corn) Zm00025a009220
Brachypodium KQJ88541
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G081400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed -
2 Sobic.009G181300 TKL_IRAK_DUF26-la.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
3 Sobic.003G385500 "Lypoxygenase, probably induced by oxidative stress, up-regulated under severe drought stress"(PubMedID : 24655390)@lipoxygenase, putative, expressed K15718: linoleate 9S-lipoxygenase
4 Sobic.003G253200 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
5 Sobic.004G209500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.003G003000 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
7 Sobic.001G331000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.003G016400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.008G008300 expressed protein -
10 Sobic.005G154300 stripe rust resistance protein Yr10, putative, expressed -
11 Sobic.004G085500 OsFBK3 - F-box domain and kelch repeat containing protein, expressed -
12 Sobic.002G067300 ATPase, putative, expressed -
13 Sobic.001G040400 EF hand family protein, putative, expressed -
14 Sobic.009G157300 Probable beta-D-xylosidase 2 (Precursor)(PubMedID : 26186930)@periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
15 Sobic.005G116900 expressed protein -
16 Sobic.009G034800 WRKY5, expressed -
17 Sobic.004G289000 protein kinase, putative, expressed -
18 Sobic.005G075400 CHASE domain containing protein, expressed -
19 Sobic.001G233200 - -
20 Sobic.004G333300 serine-rich protein, putative, expressed -


Gene co-expression network
sample Sobic006G274500 Sobic006G274500 Sobic008G081400 Sobic008G081400 Sobic006G274500--Sobic008G081400 Sobic009G181300 Sobic009G181300 Sobic006G274500--Sobic009G181300 Sobic003G385500 Sobic003G385500 Sobic006G274500--Sobic003G385500 Sobic003G253200 Sobic003G253200 Sobic006G274500--Sobic003G253200 Sobic004G209500 Sobic004G209500 Sobic006G274500--Sobic004G209500 Sobic003G003000 Sobic003G003000 Sobic006G274500--Sobic003G003000 Sobic001G331000 Sobic001G331000 Sobic006G274500--Sobic001G331000 Sobic003G016400 Sobic003G016400 Sobic006G274500--Sobic003G016400 Sobic008G008300 Sobic008G008300 Sobic006G274500--Sobic008G008300 Sobic008G081400--Sobic009G181300 Sobic008G081400--Sobic006G274500 Sobic004G349300 Sobic004G349300 Sobic008G081400--Sobic004G349300 Sobic008G081400--Sobic003G385500 Sobic002G027700 Sobic002G027700 Sobic008G081400--Sobic002G027700 Sobic003G417000 Sobic003G417000 Sobic008G081400--Sobic003G417000 Sobic008G074500 Sobic008G074500 Sobic008G081400--Sobic008G074500 Sobic002G067300 Sobic002G067300 Sobic008G081400--Sobic002G067300 Sobic008G097300 Sobic008G097300 Sobic008G081400--Sobic008G097300 Sobic009G181300--Sobic008G081400 Sobic006G021900 Sobic006G021900 Sobic009G181300--Sobic006G021900 Sobic009G181300--Sobic003G385500 Sobic009G181300--Sobic006G274500 Sobic010G158900 Sobic010G158900 Sobic009G181300--Sobic010G158900 Sobic009G157300 Sobic009G157300 Sobic009G181300--Sobic009G157300 Sobic009G181300--Sobic004G349300 Sobic004G197800 Sobic004G197800 Sobic009G181300--Sobic004G197800 Sobic009G181300--Sobic002G067300 Sobic006G045000 Sobic006G045000 Sobic003G385500--Sobic006G045000 Sobic005G182701 Sobic005G182701 Sobic003G385500--Sobic005G182701 Sobic001G056400 Sobic001G056400 Sobic003G385500--Sobic001G056400 Sobic007G055600 Sobic007G055600 Sobic003G385500--Sobic007G055600 Sobic009G014600 Sobic009G014600 Sobic003G385500--Sobic009G014600 Sobic001G056500 Sobic001G056500 Sobic003G385500--Sobic001G056500 Sobic007G076000 Sobic007G076000 Sobic003G385500--Sobic007G076000 Sobic008G038100 Sobic008G038100 Sobic003G385500--Sobic008G038100 Sobic001G410450 Sobic001G410450 Sobic003G385500--Sobic001G410450 Sobic001G319200 Sobic001G319200 Sobic003G253200--Sobic001G319200 Sobic002G214500 Sobic002G214500 Sobic003G253200--Sobic002G214500 Sobic003G253200--Sobic006G274500 Sobic010G275001 Sobic010G275001 Sobic003G253200--Sobic010G275001 Sobic003G253200--Sobic001G331000 Sobic004G333300 Sobic004G333300 Sobic003G253200--Sobic004G333300 Sobic001G156600 Sobic001G156600 Sobic003G253200--Sobic001G156600 Sobic003G125500 Sobic003G125500 Sobic003G253200--Sobic003G125500 Sobic009G115600 Sobic009G115600 Sobic003G253200--Sobic009G115600 Sobic009G216050 Sobic009G216050 Sobic004G209500--Sobic009G216050 Sobic004G209500--Sobic006G045000 Sobic010G214200 Sobic010G214200 Sobic004G209500--Sobic010G214200 Sobic003G310500 Sobic003G310500 Sobic004G209500--Sobic003G310500 Sobic005G085500 Sobic005G085500 Sobic004G209500--Sobic005G085500 Sobic009G233900 Sobic009G233900 Sobic004G209500--Sobic009G233900 Sobic002G216500 Sobic002G216500 Sobic004G209500--Sobic002G216500 Sobic002G209100 Sobic002G209100 Sobic004G209500--Sobic002G209100 Sobic004G217700 Sobic004G217700 Sobic004G209500--Sobic004G217700 Sobic001G129400 Sobic001G129400 Sobic003G003000--Sobic001G129400 Sobic001G132900 Sobic001G132900 Sobic003G003000--Sobic001G132900 Sobic006G281200 Sobic006G281200 Sobic003G003000--Sobic006G281200 Sobic010G018000 Sobic010G018000 Sobic003G003000--Sobic010G018000 Sobic001G008800 Sobic001G008800 Sobic003G003000--Sobic001G008800 Sobic004G018400 Sobic004G018400 Sobic003G003000--Sobic004G018400 Sobic002G117200 Sobic002G117200 Sobic003G003000--Sobic002G117200 Sobic010G094800 Sobic010G094800 Sobic003G003000--Sobic010G094800 Sobic005G127100 Sobic005G127100 Sobic003G003000--Sobic005G127100 Sobic006G228200 Sobic006G228200 Sobic001G331000--Sobic006G228200 Sobic007G158500 Sobic007G158500 Sobic001G331000--Sobic007G158500 Sobic001G331000--Sobic002G067300 Sobic006G031200 Sobic006G031200 Sobic001G331000--Sobic006G031200 Sobic001G331000--Sobic006G021900 Sobic001G331000--Sobic002G214500 Sobic003G428900 Sobic003G428900 Sobic001G331000--Sobic003G428900 Sobic004G167300 Sobic004G167300 Sobic001G331000--Sobic004G167300 Sobic001G331000--Sobic006G274500 Sobic003G016400--Sobic003G003000 Sobic003G016400--Sobic008G008300 Sobic003G016400--Sobic001G132900 Sobic001G136500 Sobic001G136500 Sobic003G016400--Sobic001G136500 Sobic006G181700 Sobic006G181700 Sobic003G016400--Sobic006G181700 Sobic010G079800 Sobic010G079800 Sobic003G016400--Sobic010G079800 Sobic004G275100 Sobic004G275100 Sobic003G016400--Sobic004G275100 Sobic008G107900 Sobic008G107900 Sobic003G016400--Sobic008G107900 Sobic006G276200 Sobic006G276200 Sobic003G016400--Sobic006G276200 Sobic008G008300--Sobic001G136500 Sobic010G001800 Sobic010G001800 Sobic008G008300--Sobic010G001800 Sobic008G008300--Sobic001G132900 Sobic008G008300--Sobic003G016400 Sobic004G206300 Sobic004G206300 Sobic008G008300--Sobic004G206300 Sobic001G099800 Sobic001G099800 Sobic008G008300--Sobic001G099800 Sobic008G008300--Sobic008G107900 Sobic008G125000 Sobic008G125000 Sobic008G008300--Sobic008G125000 Sobic009G256700 Sobic009G256700 Sobic008G008300--Sobic009G256700
Octagon: transcription factors


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