Gene annotation
Transcriptome id Sobic.004G289000.3,Sobic.004G289000.1
Synonym Sb04g032450
Functional annotation protein kinase, putative, expressed
UniProt A0A194YS83 , A0A1Z5RQK3
Pfam PF04564 PF00069
Panther DB PTHR27003 PTHR27003:SF52
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0016567; protein ubiquitination GO:0004842ubiquitin-protein transferase activity GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G45910 : U-box domain-containing protein kinase family protein
RAP-DB (Rice) LOC_Os10g40100.2,LOC_Os10g40100.1 : protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a032247 , Zm00025a010239
Brachypodium KQK00720 , KQK00721 , PNT69212 , PNT69213
Barley HORVU6Hr1G064130.1 , HORVU6Hr1G064130.10 , HORVU6Hr1G064130.11 , HORVU6Hr1G064130.12 , HORVU6Hr1G064130.13 , HORVU6Hr1G064130.14 , HORVU6Hr1G064130.15 , HORVU6Hr1G064130.16 , HORVU6Hr1G064130.2 , HORVU6Hr1G064130.3 , HORVU6Hr1G064130.6 , HORVU6Hr1G064130.7 , HORVU6Hr1G064130.4 , HORVU6Hr1G064130.5 , HORVU6Hr1G064130.8 , HORVU6Hr1G064130.9
Wheat TraesCS6A02G245500 , TraesCS6B02G278900 , TraesCS6D02G227900 , TraesCS6A02G346100 , TraesCS6A02G346100 , TraesCS6D02G329000 , TraesCS6D02G329000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G018600 retinol dehydrogenase, putative, expressed -
2 Sobic.006G101900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
3 Sobic.007G089900 4-Coumarate-CoA ligase(PubMedID : 22313236)@AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
4 Sobic.004G085500 OsFBK3 - F-box domain and kelch repeat containing protein, expressed -
5 Sobic.001G443100 Oxidoreductase superfamily protein("PubMedID : 26759170,PubMedID : 24597475")@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
6 Sobic.010G234300 - -
7 Sobic.003G368000 OsFBT3 - F-box and tubby domain containing protein, expressed -
8 Sobic.009G130200 endo-1,3@1,4-beta-D-glucanase precursor, putative, expressed -
9 Sobic.008G084900 D-mannose binding lectin family protein, expressed -
10 Sobic.009G225800 expressed protein -
11 Sobic.008G099300 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
12 Sobic.005G033000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
13 Sobic.004G008600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
14 Sobic.010G269000 bZIP transcription factor domain containing protein, expressed -
15 Sobic.005G226350 - -
16 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
17 Sobic.007G087400 amino acid transporter, putative, expressed -
18 Sobic.001G189200 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.009G106500 PMR5, putative, expressed -
20 Sobic.007G015100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic004G289000 Sobic004G289000 Sobic010G018600 Sobic010G018600 Sobic004G289000--Sobic010G018600 Sobic006G101900 Sobic006G101900 Sobic004G289000--Sobic006G101900 Sobic007G089900 Sobic007G089900 Sobic004G289000--Sobic007G089900 Sobic004G085500 Sobic004G085500 Sobic004G289000--Sobic004G085500 Sobic001G443100 Sobic001G443100 Sobic004G289000--Sobic001G443100 Sobic010G234300 Sobic010G234300 Sobic004G289000--Sobic010G234300 Sobic003G368000 Sobic003G368000 Sobic004G289000--Sobic003G368000 Sobic009G130200 Sobic009G130200 Sobic004G289000--Sobic009G130200 Sobic008G084900 Sobic008G084900 Sobic004G289000--Sobic008G084900 Sobic005G069166 Sobic005G069166 Sobic010G018600--Sobic005G069166 Sobic004G299500 Sobic004G299500 Sobic010G018600--Sobic004G299500 Sobic006G230100 Sobic006G230100 Sobic010G018600--Sobic006G230100 Sobic007G202480 Sobic007G202480 Sobic010G018600--Sobic007G202480 Sobic004G261500 Sobic004G261500 Sobic010G018600--Sobic004G261500 Sobic001G395900 Sobic001G395900 Sobic010G018600--Sobic001G395900 Sobic006G229901 Sobic006G229901 Sobic010G018600--Sobic006G229901 Sobic008G058600 Sobic008G058600 Sobic010G018600--Sobic008G058600 Sobic007G015000 Sobic007G015000 Sobic010G018600--Sobic007G015000 Sobic001G414800 Sobic001G414800 Sobic006G101900--Sobic001G414800 Sobic005G097400 Sobic005G097400 Sobic006G101900--Sobic005G097400 Sobic001G499900 Sobic001G499900 Sobic006G101900--Sobic001G499900 Sobic006G133300 Sobic006G133300 Sobic006G101900--Sobic006G133300 Sobic009G225800 Sobic009G225800 Sobic006G101900--Sobic009G225800 Sobic010G191600 Sobic010G191600 Sobic006G101900--Sobic010G191600 Sobic001G507100 Sobic001G507100 Sobic006G101900--Sobic001G507100 Sobic008G022100 Sobic008G022100 Sobic006G101900--Sobic008G022100 Sobic003G167300 Sobic003G167300 Sobic006G101900--Sobic003G167300 Sobic008G099300 Sobic008G099300 Sobic007G089900--Sobic008G099300 Sobic007G089900--Sobic010G018600 Sobic002G323600 Sobic002G323600 Sobic007G089900--Sobic002G323600 Sobic007G089900--Sobic001G443100 Sobic005G069000 Sobic005G069000 Sobic007G089900--Sobic005G069000 Sobic007G193200 Sobic007G193200 Sobic007G089900--Sobic007G193200 Sobic001G442500 Sobic001G442500 Sobic007G089900--Sobic001G442500 Sobic005G110541 Sobic005G110541 Sobic007G089900--Sobic005G110541 Sobic007G089900--Sobic009G225800 Sobic004G085500--Sobic006G101900 Sobic004G085500--Sobic009G225800 Sobic010G001300 Sobic010G001300 Sobic004G085500--Sobic010G001300 Sobic009G084400 Sobic009G084400 Sobic004G085500--Sobic009G084400 Sobic005G134200 Sobic005G134200 Sobic004G085500--Sobic005G134200 Sobic005G093500 Sobic005G093500 Sobic004G085500--Sobic005G093500 Sobic004G187600 Sobic004G187600 Sobic004G085500--Sobic004G187600 Sobic009G106500 Sobic009G106500 Sobic004G085500--Sobic009G106500 Sobic004G008600 Sobic004G008600 Sobic004G085500--Sobic004G008600 Sobic001G443100--Sobic004G261500 Sobic001G443100--Sobic001G395900 Sobic005G101000 Sobic005G101000 Sobic001G443100--Sobic005G101000 Sobic002G082000 Sobic002G082000 Sobic001G443100--Sobic002G082000 Sobic001G443100--Sobic006G230100 Sobic003G154500 Sobic003G154500 Sobic001G443100--Sobic003G154500 Sobic005G033000 Sobic005G033000 Sobic001G443100--Sobic005G033000 Sobic006G230200 Sobic006G230200 Sobic001G443100--Sobic006G230200 Sobic001G443100--Sobic008G058600 Sobic010G234300--Sobic001G443100 Sobic001G471800 Sobic001G471800 Sobic010G234300--Sobic001G471800 Sobic003G255600 Sobic003G255600 Sobic010G234300--Sobic003G255600 Sobic008G079800 Sobic008G079800 Sobic010G234300--Sobic008G079800 Sobic005G219700 Sobic005G219700 Sobic010G234300--Sobic005G219700 Sobic010G234300--Sobic009G106500 Sobic003G082700 Sobic003G082700 Sobic010G234300--Sobic003G082700 Sobic002G207000 Sobic002G207000 Sobic010G234300--Sobic002G207000 Sobic007G064900 Sobic007G064900 Sobic010G234300--Sobic007G064900 Sobic004G161900 Sobic004G161900 Sobic003G368000--Sobic004G161900 Sobic008G037900 Sobic008G037900 Sobic003G368000--Sobic008G037900 Sobic003G099000 Sobic003G099000 Sobic003G368000--Sobic003G099000 Sobic010G045400 Sobic010G045400 Sobic003G368000--Sobic010G045400 Sobic003G017601 Sobic003G017601 Sobic003G368000--Sobic003G017601 Sobic010G097200 Sobic010G097200 Sobic003G368000--Sobic010G097200 Sobic010G191700 Sobic010G191700 Sobic003G368000--Sobic010G191700 Sobic003G079100 Sobic003G079100 Sobic003G368000--Sobic003G079100 Sobic002G391400 Sobic002G391400 Sobic003G368000--Sobic002G391400 Sobic009G130200--Sobic005G033000 Sobic009G079200 Sobic009G079200 Sobic009G130200--Sobic009G079200 Sobic002G096000 Sobic002G096000 Sobic009G130200--Sobic002G096000 Sobic009G130200--Sobic006G133300 Sobic001G238100 Sobic001G238100 Sobic009G130200--Sobic001G238100 Sobic006G059800 Sobic006G059800 Sobic009G130200--Sobic006G059800 Sobic009G130200--Sobic001G443100 Sobic005G226350 Sobic005G226350 Sobic009G130200--Sobic005G226350 Sobic002G334000 Sobic002G334000 Sobic009G130200--Sobic002G334000 Sobic005G216500 Sobic005G216500 Sobic008G084900--Sobic005G216500 Sobic008G084900--Sobic004G008600 Sobic010G269000 Sobic010G269000 Sobic008G084900--Sobic010G269000 Sobic002G238700 Sobic002G238700 Sobic008G084900--Sobic002G238700 Sobic002G019100 Sobic002G019100 Sobic008G084900--Sobic002G019100 Sobic006G009700 Sobic006G009700 Sobic008G084900--Sobic006G009700 Sobic008G084900--Sobic005G134200 Sobic002G115600 Sobic002G115600 Sobic008G084900--Sobic002G115600 Sobic002G003400 Sobic002G003400 Sobic008G084900--Sobic002G003400
Octagon: transcription factors


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