Gene annotation
Transcriptome id Sobic.006G101900.1
Synonym Sb06g018540
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
transporter family protein, putative, expressed
UniProt A0A1B6PL94
Pfam PF07690
Panther DB PTHR23500 PTHR23500:SF73
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G34580 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os04g37980.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a056183 , Zm00025a011155 , Zm00025a011156 , Zm00025a011150 , Zm00025a050081
Brachypodium KQJ82923 , KQJ95161 , PNT61205 , PNT61204 , PNT61207 , PNT61206 , PNT61203 , KQJ82916 , KQJ82917 , KQJ82915 , KQJ82918 , KQJ82919 , KQK21214
Barley HORVU2Hr1G079620.1 , HORVU2Hr1G079620.3 , HORVU2Hr1G079620.2 , HORVU6Hr1G084290.1 , HORVU6Hr1G084290.3 , HORVU6Hr1G084290.2 , HORVU6Hr1G084290.23 , HORVU6Hr1G084290.24 , HORVU6Hr1G084290.25 , HORVU2Hr1G064160.1 , HORVU2Hr1G064160.3 , HORVU2Hr1G064160.5 , HORVU2Hr1G064160.4 , HORVU2Hr1G064160.6 , HORVU2Hr1G064160.9 , HORVU5Hr1G000380.1 , HORVU2Hr1G079700.4 , HORVU2Hr1G079700.3 , HORVU2Hr1G079700.2 , HORVU2Hr1G079700.1 , HORVU4Hr1G084740.1 , HORVU4Hr1G084740.3 , HORVU4Hr1G084740.2 , HORVU4Hr1G084740.4 , HORVU2Hr1G079790.1 , HORVU2Hr1G079790.2 , HORVU2Hr1G079790.3 , HORVU2Hr1G079790.4 , HORVU2Hr1G079790.5 , HORVU2Hr1G079790.6 , HORVU2Hr1G079790.7 , HORVU2Hr1G079790.8 , HORVU2Hr1G079790.9 , HORVU2Hr1G064160.11 , HORVU2Hr1G064160.10 , HORVU2Hr1G064160.12 , HORVU6Hr1G084290.14 , HORVU6Hr1G084290.7 , HORVU6Hr1G084290.9 , HORVU6Hr1G084290.8
Wheat TraesCS2B02G338400 , TraesCS5B02G001000 , TraesCS2A02G341400 , TraesCS2A02G340600 , TraesCS7B02G185800 , TraesCS7D02G286600 , TraesCS2D02G318200 , TraesCS5D02G001600 , TraesCS2D02G264200 , TraesCS5A02G515200 , TraesCS2B02G339100 , TraesCS4D02G341400 , TraesCS4B02G346400 , TraesCS2A02G259500 , TraesCS2B02G282400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G414800 dirigent, putative, expressed -
2 Sobic.005G097400 cell death associated protein, putative, expressed -
3 Sobic.001G499900 expansin precursor, putative, expressed -
4 Sobic.006G133300 expressed protein -
5 Sobic.009G225800 expressed protein -
6 Sobic.010G191600 cytochrome P450, putative, expressed -
7 Sobic.001G507100 dirigent, putative, expressed -
8 Sobic.008G022100 nucleoside-triphosphatase, putative, expressed K14641: apyrase
9 Sobic.003G167300 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.009G065700 - -
11 Sobic.007G206800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like protein kinase, putative, expressed -
12 Sobic.006G106900 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
13 Sobic.002G391400 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.005G217766 - -
15 Sobic.006G205700 glycosyl hydrolases family 16, putative, expressed -
16 Sobic.002G111900 receptor-like kinase, putative, expressed -
17 Sobic.001G416100 - -
18 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
19 Sobic.005G033000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
20 Sobic.005G046400 - -


Gene co-expression network
sample Sobic006G101900 Sobic006G101900 Sobic001G414800 Sobic001G414800 Sobic006G101900--Sobic001G414800 Sobic005G097400 Sobic005G097400 Sobic006G101900--Sobic005G097400 Sobic001G499900 Sobic001G499900 Sobic006G101900--Sobic001G499900 Sobic006G133300 Sobic006G133300 Sobic006G101900--Sobic006G133300 Sobic009G225800 Sobic009G225800 Sobic006G101900--Sobic009G225800 Sobic010G191600 Sobic010G191600 Sobic006G101900--Sobic010G191600 Sobic001G507100 Sobic001G507100 Sobic006G101900--Sobic001G507100 Sobic008G022100 Sobic008G022100 Sobic006G101900--Sobic008G022100 Sobic003G167300 Sobic003G167300 Sobic006G101900--Sobic003G167300 Sobic006G106900 Sobic006G106900 Sobic001G414800--Sobic006G106900 Sobic001G414800--Sobic001G507100 Sobic001G414800--Sobic010G191600 Sobic007G206800 Sobic007G206800 Sobic001G414800--Sobic007G206800 Sobic003G064800 Sobic003G064800 Sobic001G414800--Sobic003G064800 Sobic005G217766 Sobic005G217766 Sobic001G414800--Sobic005G217766 Sobic001G414800--Sobic005G097400 Sobic007G086300 Sobic007G086300 Sobic001G414800--Sobic007G086300 Sobic001G414800--Sobic008G022100 Sobic005G097400--Sobic010G191600 Sobic002G118801 Sobic002G118801 Sobic005G097400--Sobic002G118801 Sobic006G205700 Sobic006G205700 Sobic005G097400--Sobic006G205700 Sobic001G539200 Sobic001G539200 Sobic005G097400--Sobic001G539200 Sobic004G106100 Sobic004G106100 Sobic005G097400--Sobic004G106100 Sobic005G097400--Sobic001G414800 Sobic002G391400 Sobic002G391400 Sobic005G097400--Sobic002G391400 Sobic005G097400--Sobic003G167300 Sobic005G097400--Sobic007G086300 Sobic001G499900--Sobic003G167300 Sobic002G392000 Sobic002G392000 Sobic001G499900--Sobic002G392000 Sobic010G241900 Sobic010G241900 Sobic001G499900--Sobic010G241900 Sobic007G220400 Sobic007G220400 Sobic001G499900--Sobic007G220400 Sobic001G499900--Sobic008G022100 Sobic001G499900--Sobic007G206800 Sobic010G191700 Sobic010G191700 Sobic001G499900--Sobic010G191700 Sobic009G065700 Sobic009G065700 Sobic001G499900--Sobic009G065700 Sobic006G047200 Sobic006G047200 Sobic001G499900--Sobic006G047200 Sobic006G133300--Sobic001G499900 Sobic006G133300--Sobic010G191600 Sobic006G133300--Sobic007G206800 Sobic006G133300--Sobic002G391400 Sobic006G133300--Sobic009G065700 Sobic006G133300--Sobic005G217766 Sobic006G133300--Sobic001G414800 Sobic006G133300--Sobic003G167300 Sobic006G133300--Sobic010G191700 Sobic009G225800--Sobic006G047200 Sobic009G225800--Sobic002G392000 Sobic006G171100 Sobic006G171100 Sobic009G225800--Sobic006G171100 Sobic009G225800--Sobic010G241900 Sobic009G136800 Sobic009G136800 Sobic009G225800--Sobic009G136800 Sobic005G035900 Sobic005G035900 Sobic009G225800--Sobic005G035900 Sobic002G391300 Sobic002G391300 Sobic009G225800--Sobic002G391300 Sobic005G046400 Sobic005G046400 Sobic009G225800--Sobic005G046400 Sobic009G225800--Sobic001G499900 Sobic010G191600--Sobic005G217766 Sobic010G191600--Sobic005G097400 Sobic002G111900 Sobic002G111900 Sobic010G191600--Sobic002G111900 Sobic010G191600--Sobic002G391400 Sobic010G191600--Sobic006G205700 Sobic001G218400 Sobic001G218400 Sobic010G191600--Sobic001G218400 Sobic010G191600--Sobic010G191700 Sobic003G441800 Sobic003G441800 Sobic010G191600--Sobic003G441800 Sobic010G191600--Sobic007G206800 Sobic001G507100--Sobic001G414800 Sobic001G507100--Sobic006G106900 Sobic001G507100--Sobic003G064800 Sobic004G306900 Sobic004G306900 Sobic001G507100--Sobic004G306900 Sobic001G507100--Sobic007G086300 Sobic001G507100--Sobic004G106100 Sobic006G133200 Sobic006G133200 Sobic001G507100--Sobic006G133200 Sobic003G319400 Sobic003G319400 Sobic001G507100--Sobic003G319400 Sobic005G202300 Sobic005G202300 Sobic001G507100--Sobic005G202300 Sobic008G022100--Sobic003G167300 Sobic008G022100--Sobic001G499900 Sobic008G022100--Sobic001G414800 Sobic008G022100--Sobic006G205700 Sobic008G022100--Sobic007G206800 Sobic008G022100--Sobic007G220400 Sobic008G022100--Sobic002G391400 Sobic008G022100--Sobic005G097400 Sobic008G022100--Sobic010G241900 Sobic003G167300--Sobic001G499900 Sobic003G167300--Sobic006G205700 Sobic003G167300--Sobic008G022100 Sobic003G167300--Sobic009G065700 Sobic003G167300--Sobic003G441800 Sobic003G167300--Sobic002G391400 Sobic003G167300--Sobic010G241900 Sobic001G348400 Sobic001G348400 Sobic003G167300--Sobic001G348400 Sobic003G095100 Sobic003G095100 Sobic003G167300--Sobic003G095100
Octagon: transcription factors


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