Gene annotation
Transcriptome id Sobic.009G130200.1
Synonym Sb09g019670
Functional annotation endo-1,3
1,4-beta-D-glucanase precursor, putative, expressed
UniProt C5YXM5
Pfam PF01738
Panther DB PTHR17630 PTHR17630:SF57
NCBI CDD KOG3043; Predicted hydrolase related to dienelactone hydrolase
KEGG Orthology -
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT3G23570 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os05g33200.1 : endo-1,3;1,4-beta-D-glucanase precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU1Hr1G061970.3 , HORVU1Hr1G061970.6 , HORVU1Hr1G061970.4 , HORVU1Hr1G061970.5 , HORVU1Hr1G061970.11 , HORVU1Hr1G061970.12 , HORVU1Hr1G061970.13 , HORVU1Hr1G061970.16 , HORVU1Hr1G061970.15
Wheat TraesCS1D02G249700 , TraesCS1A02G250100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G033000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
2 Sobic.009G079200 expressed protein -
3 Sobic.002G096000 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
4 Sobic.006G133300 expressed protein -
5 Sobic.001G238100 expansin precursor, putative, expressed -
6 Sobic.006G059800 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
7 Sobic.001G443100 Oxidoreductase superfamily protein("PubMedID : 26759170,PubMedID : 24597475")@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
8 Sobic.005G226350 - -
9 Sobic.002G334000 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
10 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -
11 Sobic.007G206800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like protein kinase, putative, expressed -
12 Sobic.005G212800 carboxyl-terminal peptidase, putative, expressed -
13 Sobic.010G269000 bZIP transcription factor domain containing protein, expressed -
14 Sobic.005G120900 expressed protein -
15 Sobic.005G035900 PAN domain-containing protein At5g03700 precursor, putative, expressed -
16 Sobic.007G214500 sucrose transporters(PubMedID : 23805151)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Sugar transporter(PubMedID : 27330561)@sucrose transporter BoSUT1, putative, expressed K15378: solute carrier family 45, member 1/2/4
17 Sobic.001G234100 expressed protein -
18 Sobic.008G109300 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
19 Sobic.009G259800 zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
20 Sobic.005G101000 - -


Gene co-expression network
sample Sobic009G130200 Sobic009G130200 Sobic005G033000 Sobic005G033000 Sobic009G130200--Sobic005G033000 Sobic009G079200 Sobic009G079200 Sobic009G130200--Sobic009G079200 Sobic002G096000 Sobic002G096000 Sobic009G130200--Sobic002G096000 Sobic006G133300 Sobic006G133300 Sobic009G130200--Sobic006G133300 Sobic001G238100 Sobic001G238100 Sobic009G130200--Sobic001G238100 Sobic006G059800 Sobic006G059800 Sobic009G130200--Sobic006G059800 Sobic001G443100 Sobic001G443100 Sobic009G130200--Sobic001G443100 Sobic005G226350 Sobic005G226350 Sobic009G130200--Sobic005G226350 Sobic002G334000 Sobic002G334000 Sobic009G130200--Sobic002G334000 Sobic010G097200 Sobic010G097200 Sobic005G033000--Sobic010G097200 Sobic003G154500 Sobic003G154500 Sobic005G033000--Sobic003G154500 Sobic004G261500 Sobic004G261500 Sobic005G033000--Sobic004G261500 Sobic009G065700 Sobic009G065700 Sobic005G033000--Sobic009G065700 Sobic001G218400 Sobic001G218400 Sobic005G033000--Sobic001G218400 Sobic001G414800 Sobic001G414800 Sobic005G033000--Sobic001G414800 Sobic005G033000--Sobic002G096000 Sobic004G079900 Sobic004G079900 Sobic005G033000--Sobic004G079900 Sobic001G499900 Sobic001G499900 Sobic005G033000--Sobic001G499900 Sobic008G084800 Sobic008G084800 Sobic009G079200--Sobic008G084800 Sobic006G047200 Sobic006G047200 Sobic009G079200--Sobic006G047200 Sobic009G079200--Sobic001G499900 Sobic009G079200--Sobic001G238100 Sobic005G212800 Sobic005G212800 Sobic009G079200--Sobic005G212800 Sobic009G079200--Sobic002G334000 Sobic006G178300 Sobic006G178300 Sobic009G079200--Sobic006G178300 Sobic001G234100 Sobic001G234100 Sobic009G079200--Sobic001G234100 Sobic001G521600 Sobic001G521600 Sobic009G079200--Sobic001G521600 Sobic002G096000--Sobic009G065700 Sobic002G096000--Sobic004G079900 Sobic002G096000--Sobic001G218400 Sobic005G035900 Sobic005G035900 Sobic002G096000--Sobic005G035900 Sobic005G101000 Sobic005G101000 Sobic002G096000--Sobic005G101000 Sobic002G096000--Sobic003G154500 Sobic002G096000--Sobic006G047200 Sobic010G010000 Sobic010G010000 Sobic002G096000--Sobic010G010000 Sobic002G096000--Sobic006G059800 Sobic006G133300--Sobic001G499900 Sobic010G191600 Sobic010G191600 Sobic006G133300--Sobic010G191600 Sobic007G206800 Sobic007G206800 Sobic006G133300--Sobic007G206800 Sobic002G391400 Sobic002G391400 Sobic006G133300--Sobic002G391400 Sobic006G133300--Sobic009G065700 Sobic005G217766 Sobic005G217766 Sobic006G133300--Sobic005G217766 Sobic006G133300--Sobic001G414800 Sobic003G167300 Sobic003G167300 Sobic006G133300--Sobic003G167300 Sobic010G191700 Sobic010G191700 Sobic006G133300--Sobic010G191700 Sobic001G238100--Sobic002G334000 Sobic003G046700 Sobic003G046700 Sobic001G238100--Sobic003G046700 Sobic006G135500 Sobic006G135500 Sobic001G238100--Sobic006G135500 Sobic001G238100--Sobic007G206800 Sobic001G238100--Sobic001G499900 Sobic009G032900 Sobic009G032900 Sobic001G238100--Sobic009G032900 Sobic001G506100 Sobic001G506100 Sobic001G238100--Sobic001G506100 Sobic007G220400 Sobic007G220400 Sobic001G238100--Sobic007G220400 Sobic002G392100 Sobic002G392100 Sobic001G238100--Sobic002G392100 Sobic002G111900 Sobic002G111900 Sobic006G059800--Sobic002G111900 Sobic006G059800--Sobic006G047200 Sobic006G059800--Sobic005G035900 Sobic002G391300 Sobic002G391300 Sobic006G059800--Sobic002G391300 Sobic002G392000 Sobic002G392000 Sobic006G059800--Sobic002G392000 Sobic006G059800--Sobic010G010000 Sobic006G059800--Sobic010G191700 Sobic006G171100 Sobic006G171100 Sobic006G059800--Sobic006G171100 Sobic010G241900 Sobic010G241900 Sobic006G059800--Sobic010G241900 Sobic001G443100--Sobic004G261500 Sobic001G395900 Sobic001G395900 Sobic001G443100--Sobic001G395900 Sobic001G443100--Sobic005G101000 Sobic002G082000 Sobic002G082000 Sobic001G443100--Sobic002G082000 Sobic006G230100 Sobic006G230100 Sobic001G443100--Sobic006G230100 Sobic001G443100--Sobic003G154500 Sobic001G443100--Sobic005G033000 Sobic006G230200 Sobic006G230200 Sobic001G443100--Sobic006G230200 Sobic008G058600 Sobic008G058600 Sobic001G443100--Sobic008G058600 Sobic005G226350--Sobic007G220400 Sobic010G128300 Sobic010G128300 Sobic005G226350--Sobic010G128300 Sobic005G226350--Sobic010G241900 Sobic010G269000 Sobic010G269000 Sobic005G226350--Sobic010G269000 Sobic005G226350--Sobic010G191700 Sobic005G134200 Sobic005G134200 Sobic005G226350--Sobic005G134200 Sobic005G226350--Sobic002G111900 Sobic005G226400 Sobic005G226400 Sobic005G226350--Sobic005G226400 Sobic004G008600 Sobic004G008600 Sobic005G226350--Sobic004G008600 Sobic002G334000--Sobic007G206800 Sobic002G334000--Sobic003G046700 Sobic002G334000--Sobic010G191700 Sobic002G334000--Sobic002G391400 Sobic002G334000--Sobic010G241900 Sobic002G334000--Sobic007G220400 Sobic002G334000--Sobic001G238100 Sobic002G334000--Sobic005G226350 Sobic002G334000--Sobic010G128300
Octagon: transcription factors


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