Gene annotation
Transcriptome id Sobic.002G096000.2,Sobic.002G096000.6,Sobic.002G096000.5,Sobic.002G096000.1,Sobic.002G096000.4
Synonym Sb02g007930
Functional annotation copper methylamine oxidase precursor, putative, expressed
UniProt A0A1W0W364 , A0A1W0W332 , A0A1W0W341 , A0A1B6QA55
Pfam PF02728 PF02727 PF01179 PF01179 PF02728 PF01179
Panther DB PTHR10638 PTHR10638:SF37
NCBI CDD -
KEGG Orthology K00276; AOC3, AOC2, primary-amine oxidase
Gene Ontology GO:0009308; amine metabolic process GO:0008131primary amine oxidase activity GO:0005507copper ion binding


Orthologs (automatic annotation)
TAIR AT1G31690 : Copper amine oxidase family protein
RAP-DB (Rice) LOC_Os06g23114.1 : copper methylamine oxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a014956
Brachypodium KQK15622
Barley HORVU4Hr1G074620.1 , HORVU4Hr1G074620.3 , HORVU4Hr1G074620.2 , HORVU4Hr1G074620.5 , HORVU4Hr1G074620.4 , HORVU4Hr1G074530.1 , HORVU4Hr1G074530.2 , HORVU4Hr1G074530.5 , HORVU4Hr1G074530.4 , HORVU4Hr1G074530.7 , HORVU4Hr1G074530.6 , HORVU4Hr1G074530.8
Wheat TraesCS4D02G281700 , TraesCS4B02G282700 , TraesCS4A02G020900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G065700 - -
2 Sobic.004G079900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@copper-transporting ATPase, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
3 Sobic.001G218400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MATH domain containing protein, expressed -
4 Sobic.005G035900 PAN domain-containing protein At5g03700 precursor, putative, expressed -
5 Sobic.005G101000 - -
6 Sobic.003G154500 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -
8 Sobic.010G010000 plant protein of unknown function domain containing protein, expressed -
9 Sobic.006G059800 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
10 Sobic.001G181600 dehydrogenase/reductase, putative, expressed -
11 Sobic.005G205400 - -
12 Sobic.001G499900 expansin precursor, putative, expressed -
13 Sobic.001G395900 Nicotianamine synthase 4("PubMedID : 26759170,PubMedID : 24597475")@nicotianamine synthase, putative, expressed K05953: nicotianamine synthase
14 Sobic.008G058600 protein kinase family protein, putative, expressed -
15 Sobic.002G111900 receptor-like kinase, putative, expressed -
16 Sobic.005G033000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
17 Sobic.004G261500 phosphoribosyl transferase, putative, expressed -
18 Sobic.007G202480 - -
19 Sobic.001G234100 expressed protein -
20 Sobic.007G140000 wall-associated receptor kinase-like 22 precursor, putative, expressed -


Gene co-expression network
sample Sobic002G096000 Sobic002G096000 Sobic009G065700 Sobic009G065700 Sobic002G096000--Sobic009G065700 Sobic004G079900 Sobic004G079900 Sobic002G096000--Sobic004G079900 Sobic001G218400 Sobic001G218400 Sobic002G096000--Sobic001G218400 Sobic005G035900 Sobic005G035900 Sobic002G096000--Sobic005G035900 Sobic005G101000 Sobic005G101000 Sobic002G096000--Sobic005G101000 Sobic003G154500 Sobic003G154500 Sobic002G096000--Sobic003G154500 Sobic006G047200 Sobic006G047200 Sobic002G096000--Sobic006G047200 Sobic010G010000 Sobic010G010000 Sobic002G096000--Sobic010G010000 Sobic006G059800 Sobic006G059800 Sobic002G096000--Sobic006G059800 Sobic003G167300 Sobic003G167300 Sobic009G065700--Sobic003G167300 Sobic003G441800 Sobic003G441800 Sobic009G065700--Sobic003G441800 Sobic002G111900 Sobic002G111900 Sobic009G065700--Sobic002G111900 Sobic009G065700--Sobic010G010000 Sobic002G289500 Sobic002G289500 Sobic009G065700--Sobic002G289500 Sobic001G499900 Sobic001G499900 Sobic009G065700--Sobic001G499900 Sobic003G441601 Sobic003G441601 Sobic009G065700--Sobic003G441601 Sobic010G241900 Sobic010G241900 Sobic009G065700--Sobic010G241900 Sobic001G348400 Sobic001G348400 Sobic009G065700--Sobic001G348400 Sobic001G153100 Sobic001G153100 Sobic004G079900--Sobic001G153100 Sobic004G261500 Sobic004G261500 Sobic004G079900--Sobic004G261500 Sobic008G058600 Sobic008G058600 Sobic004G079900--Sobic008G058600 Sobic004G079900--Sobic006G047200 Sobic004G079900--Sobic009G065700 Sobic004G079900--Sobic005G101000 Sobic006G171100 Sobic006G171100 Sobic004G079900--Sobic006G171100 Sobic001G181600 Sobic001G181600 Sobic004G079900--Sobic001G181600 Sobic004G079900--Sobic010G010000 Sobic006G097900 Sobic006G097900 Sobic001G218400--Sobic006G097900 Sobic004G121600 Sobic004G121600 Sobic001G218400--Sobic004G121600 Sobic001G218400--Sobic001G181600 Sobic001G218400--Sobic003G441800 Sobic010G191600 Sobic010G191600 Sobic001G218400--Sobic010G191600 Sobic001G218400--Sobic003G154500 Sobic003G441700 Sobic003G441700 Sobic001G218400--Sobic003G441700 Sobic001G218400--Sobic010G010000 Sobic005G119900 Sobic005G119900 Sobic001G218400--Sobic005G119900 Sobic005G035900--Sobic006G047200 Sobic005G035900--Sobic010G241900 Sobic005G035900--Sobic002G111900 Sobic007G220400 Sobic007G220400 Sobic005G035900--Sobic007G220400 Sobic005G035900--Sobic006G059800 Sobic002G392000 Sobic002G392000 Sobic005G035900--Sobic002G392000 Sobic005G134200 Sobic005G134200 Sobic005G035900--Sobic005G134200 Sobic005G035900--Sobic006G171100 Sobic002G391300 Sobic002G391300 Sobic005G035900--Sobic002G391300 Sobic001G234100 Sobic001G234100 Sobic005G101000--Sobic001G234100 Sobic001G395900 Sobic001G395900 Sobic005G101000--Sobic001G395900 Sobic005G101000--Sobic008G058600 Sobic008G084800 Sobic008G084800 Sobic005G101000--Sobic008G084800 Sobic005G101000--Sobic006G047200 Sobic005G212800 Sobic005G212800 Sobic005G101000--Sobic005G212800 Sobic005G205400 Sobic005G205400 Sobic005G101000--Sobic005G205400 Sobic004G299500 Sobic004G299500 Sobic005G101000--Sobic004G299500 Sobic007G202480 Sobic007G202480 Sobic005G101000--Sobic007G202480 Sobic003G154500--Sobic001G181600 Sobic003G154500--Sobic005G119900 Sobic003G154500--Sobic001G395900 Sobic006G230200 Sobic006G230200 Sobic003G154500--Sobic006G230200 Sobic003G154500--Sobic007G202480 Sobic009G055300 Sobic009G055300 Sobic003G154500--Sobic009G055300 Sobic006G230100 Sobic006G230100 Sobic003G154500--Sobic006G230100 Sobic003G154500--Sobic001G218400 Sobic003G154500--Sobic004G261500 Sobic006G047200--Sobic005G035900 Sobic006G047200--Sobic005G205400 Sobic006G047200--Sobic008G084800 Sobic006G047200--Sobic002G392000 Sobic006G047200--Sobic001G234100 Sobic006G047200--Sobic005G101000 Sobic009G136800 Sobic009G136800 Sobic006G047200--Sobic009G136800 Sobic006G047200--Sobic010G241900 Sobic006G047200--Sobic005G134200 Sobic010G010000--Sobic006G171100 Sobic010G010000--Sobic002G111900 Sobic010G010000--Sobic003G441601 Sobic010G010000--Sobic002G391300 Sobic010G010000--Sobic009G136800 Sobic010G010000--Sobic009G055300 Sobic010G010000--Sobic002G289500 Sobic005G226400 Sobic005G226400 Sobic010G010000--Sobic005G226400 Sobic002G063700 Sobic002G063700 Sobic010G010000--Sobic002G063700 Sobic006G059800--Sobic002G111900 Sobic006G059800--Sobic006G047200 Sobic006G059800--Sobic005G035900 Sobic006G059800--Sobic002G391300 Sobic006G059800--Sobic002G392000 Sobic006G059800--Sobic010G010000 Sobic010G191700 Sobic010G191700 Sobic006G059800--Sobic010G191700 Sobic006G059800--Sobic006G171100 Sobic006G059800--Sobic010G241900
Octagon: transcription factors


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