Gene annotation
Transcriptome id Sobic.006G009600.1
Synonym Sb06g000980
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5YBQ4
Pfam PF08224
Panther DB PTHR33377 PTHR33377:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g02970.1 : expressed protein
MaizeGDB (Corn) Zm00025a045636
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G422400 amino acid permease family protein, putative, expressed -
2 Sobic.003G192600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like kinase ARK1AS, putative, expressed -
3 Sobic.004G085500 OsFBK3 - F-box domain and kelch repeat containing protein, expressed -
4 Sobic.001G272900 avr9/Cf-9 rapidly elicited protein 74, putative, expressed -
5 Sobic.005G076500 RGH1A, putative, expressed -
6 Sobic.007G089900 4-Coumarate-CoA ligase(PubMedID : 22313236)@AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
7 Sobic.010G001300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein transferase (At)(PubMedID : 27208977)@transferase family protein, putative, expressed -
8 Sobic.006G168100 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
9 Sobic.010G019800 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
10 Sobic.001G326400 cytochrome P450, putative, expressed -
11 Sobic.001G261600 cellulase, putative, expressed -
12 Sobic.006G228200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like kinase, putative, expressed -
13 Sobic.006G031200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DSBA-like thioredoxin domain containing protein, expressed -
14 Sobic.008G009100 SAG20, putative, expressed -
15 Sobic.005G126200 Leucine-rich repeat protein 1(PubMedID : 31721651)@BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
16 Sobic.001G291600 - -
17 Sobic.003G031100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
18 Sobic.005G216100 Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
19 Sobic.002G323600 lipase class 3 family protein, putative, expressed -
20 Sobic.007G158500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@patatin, putative, expressed -


Gene co-expression network
sample Sobic006G009600 Sobic006G009600 Sobic003G422400 Sobic003G422400 Sobic006G009600--Sobic003G422400 Sobic003G192600 Sobic003G192600 Sobic006G009600--Sobic003G192600 Sobic004G085500 Sobic004G085500 Sobic006G009600--Sobic004G085500 Sobic001G272900 Sobic001G272900 Sobic006G009600--Sobic001G272900 Sobic005G076500 Sobic005G076500 Sobic006G009600--Sobic005G076500 Sobic007G089900 Sobic007G089900 Sobic006G009600--Sobic007G089900 Sobic010G001300 Sobic010G001300 Sobic006G009600--Sobic010G001300 Sobic006G168100 Sobic006G168100 Sobic006G009600--Sobic006G168100 Sobic010G019800 Sobic010G019800 Sobic006G009600--Sobic010G019800 Sobic003G422400--Sobic006G009600 Sobic005G126200 Sobic005G126200 Sobic003G422400--Sobic005G126200 Sobic009G102300 Sobic009G102300 Sobic003G422400--Sobic009G102300 Sobic001G099400 Sobic001G099400 Sobic003G422400--Sobic001G099400 Sobic003G422400--Sobic010G019800 Sobic005G060900 Sobic005G060900 Sobic003G422400--Sobic005G060900 Sobic001G328000 Sobic001G328000 Sobic003G422400--Sobic001G328000 Sobic003G031100 Sobic003G031100 Sobic003G422400--Sobic003G031100 Sobic010G084000 Sobic010G084000 Sobic003G422400--Sobic010G084000 Sobic004G323900 Sobic004G323900 Sobic003G192600--Sobic004G323900 Sobic003G017601 Sobic003G017601 Sobic003G192600--Sobic003G017601 Sobic005G110541 Sobic005G110541 Sobic003G192600--Sobic005G110541 Sobic005G071900 Sobic005G071900 Sobic003G192600--Sobic005G071900 Sobic010G122000 Sobic010G122000 Sobic003G192600--Sobic010G122000 Sobic005G110511 Sobic005G110511 Sobic003G192600--Sobic005G110511 Sobic001G353200 Sobic001G353200 Sobic003G192600--Sobic001G353200 Sobic004G161900 Sobic004G161900 Sobic003G192600--Sobic004G161900 Sobic003G079100 Sobic003G079100 Sobic003G192600--Sobic003G079100 Sobic006G101900 Sobic006G101900 Sobic004G085500--Sobic006G101900 Sobic009G225800 Sobic009G225800 Sobic004G085500--Sobic009G225800 Sobic004G085500--Sobic010G001300 Sobic009G084400 Sobic009G084400 Sobic004G085500--Sobic009G084400 Sobic005G134200 Sobic005G134200 Sobic004G085500--Sobic005G134200 Sobic005G093500 Sobic005G093500 Sobic004G085500--Sobic005G093500 Sobic004G187600 Sobic004G187600 Sobic004G085500--Sobic004G187600 Sobic009G106500 Sobic009G106500 Sobic004G085500--Sobic009G106500 Sobic004G008600 Sobic004G008600 Sobic004G085500--Sobic004G008600 Sobic009G084300 Sobic009G084300 Sobic001G272900--Sobic009G084300 Sobic007G120000 Sobic007G120000 Sobic001G272900--Sobic007G120000 Sobic003G106300 Sobic003G106300 Sobic001G272900--Sobic003G106300 Sobic003G263300 Sobic003G263300 Sobic001G272900--Sobic003G263300 Sobic001G272900--Sobic010G001300 Sobic003G080900 Sobic003G080900 Sobic001G272900--Sobic003G080900 Sobic001G326400 Sobic001G326400 Sobic001G272900--Sobic001G326400 Sobic003G076700 Sobic003G076700 Sobic001G272900--Sobic003G076700 Sobic009G040175 Sobic009G040175 Sobic001G272900--Sobic009G040175 Sobic010G015800 Sobic010G015800 Sobic005G076500--Sobic010G015800 Sobic009G033100 Sobic009G033100 Sobic005G076500--Sobic009G033100 Sobic008G099600 Sobic008G099600 Sobic005G076500--Sobic008G099600 Sobic005G076500--Sobic010G019800 Sobic002G303100 Sobic002G303100 Sobic005G076500--Sobic002G303100 Sobic005G096000 Sobic005G096000 Sobic005G076500--Sobic005G096000 Sobic006G201700 Sobic006G201700 Sobic005G076500--Sobic006G201700 Sobic010G122200 Sobic010G122200 Sobic005G076500--Sobic010G122200 Sobic010G123400 Sobic010G123400 Sobic005G076500--Sobic010G123400 Sobic008G099300 Sobic008G099300 Sobic007G089900--Sobic008G099300 Sobic010G018600 Sobic010G018600 Sobic007G089900--Sobic010G018600 Sobic002G323600 Sobic002G323600 Sobic007G089900--Sobic002G323600 Sobic001G443100 Sobic001G443100 Sobic007G089900--Sobic001G443100 Sobic005G069000 Sobic005G069000 Sobic007G089900--Sobic005G069000 Sobic007G193200 Sobic007G193200 Sobic007G089900--Sobic007G193200 Sobic001G442500 Sobic001G442500 Sobic007G089900--Sobic001G442500 Sobic007G089900--Sobic005G110541 Sobic007G089900--Sobic009G225800 Sobic001G218500 Sobic001G218500 Sobic010G001300--Sobic001G218500 Sobic004G014600 Sobic004G014600 Sobic010G001300--Sobic004G014600 Sobic007G135100 Sobic007G135100 Sobic010G001300--Sobic007G135100 Sobic004G119800 Sobic004G119800 Sobic010G001300--Sobic004G119800 Sobic002G195600 Sobic002G195600 Sobic010G001300--Sobic002G195600 Sobic006G196400 Sobic006G196400 Sobic010G001300--Sobic006G196400 Sobic006G092700 Sobic006G092700 Sobic010G001300--Sobic006G092700 Sobic010G097200 Sobic010G097200 Sobic010G001300--Sobic010G097200 Sobic001G209300 Sobic001G209300 Sobic010G001300--Sobic001G209300 Sobic005G217766 Sobic005G217766 Sobic006G168100--Sobic005G217766 Sobic001G218400 Sobic001G218400 Sobic006G168100--Sobic001G218400 Sobic003G020500 Sobic003G020500 Sobic006G168100--Sobic003G020500 Sobic001G299100 Sobic001G299100 Sobic006G168100--Sobic001G299100 Sobic002G111900 Sobic002G111900 Sobic006G168100--Sobic002G111900 Sobic004G121600 Sobic004G121600 Sobic006G168100--Sobic004G121600 Sobic002G183750 Sobic002G183750 Sobic006G168100--Sobic002G183750 Sobic003G441601 Sobic003G441601 Sobic006G168100--Sobic003G441601 Sobic008G033700 Sobic008G033700 Sobic006G168100--Sobic008G033700 Sobic010G019800--Sobic010G084000 Sobic010G256800 Sobic010G256800 Sobic010G019800--Sobic010G256800 Sobic002G301500 Sobic002G301500 Sobic010G019800--Sobic002G301500 Sobic005G129400 Sobic005G129400 Sobic010G019800--Sobic005G129400 Sobic010G021000 Sobic010G021000 Sobic010G019800--Sobic010G021000 Sobic010G019800--Sobic010G123400 Sobic001G057200 Sobic001G057200 Sobic010G019800--Sobic001G057200 Sobic001G123000 Sobic001G123000 Sobic010G019800--Sobic001G123000 Sobic001G540100 Sobic001G540100 Sobic010G019800--Sobic001G540100
Octagon: transcription factors


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