Gene annotation
Transcriptome id Sobic.003G422400.1
Synonym BAT1, Sb03g045530
Functional annotation amino acid permease family protein, putative, expressed
UniProt C5XHS6
Pfam PF00324
Panther DB PTHR11785 PTHR11785:SF356
NCBI CDD KOG1289; Amino acid transporters
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0015171amino acid transmembrane transporter activity GO:0003333amino acid transmembrane transport


Orthologs (automatic annotation)
TAIR AT2G01170 : bidirectional amino acid transporter 1
RAP-DB (Rice) LOC_Os01g71740.1 : amino acid permease family protein, putative, expressed
MaizeGDB (Corn) Zm00025a026049 , Zm00025a026047 , Zm00025a038470 , Zm00025a028664 , Zm00025a026059
Brachypodium KQK11517 , KQK11518 , KQK03895 , KQK08653 , PNT73590 , PNT72362 , PNT72363 , PNT72361
Barley HORVU3Hr1G105870.8 , HORVU3Hr1G105870.9 , HORVU3Hr1G105870.4 , HORVU3Hr1G105870.5 , HORVU3Hr1G105870.6 , HORVU3Hr1G105870.7 , HORVU3Hr1G105870.1 , HORVU3Hr1G105870.2 , HORVU3Hr1G105870.3 , HORVU3Hr1G105870.14 , HORVU3Hr1G105870.15 , HORVU3Hr1G105870.12 , HORVU3Hr1G105870.13 , HORVU3Hr1G105870.10 , HORVU3Hr1G105870.11 , HORVU3Hr1G105920.6 , HORVU3Hr1G105920.7 , HORVU3Hr1G105920.4 , HORVU3Hr1G105920.5 , HORVU3Hr1G105920.2 , HORVU3Hr1G105920.3 , HORVU3Hr1G105920.1 , HORVU3Hr1G105920.8 , HORVU3Hr1G105920.9 , HORVU3Hr1G105920.11
Wheat TraesCS3D02G480000 , TraesCS3B02G532100 , TraesCS3A02G484900 , TraesCS3A02G217200 , TraesCS3D02G480100 , TraesCS3D02G219100 , TraesCS3A02G484600 , TraesCS3B02G531900 , TraesCS3A02G484700 , TraesCS3B02G247500 , TraesCS3B02G531700 , TraesCS3D02G479800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G009600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.005G126200 Leucine-rich repeat protein 1(PubMedID : 31721651)@BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
3 Sobic.009G102300 hydrolase, acting on glycosyl bonds, putative, expressed K01227: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
4 Sobic.001G099400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@proton-dependent oligopeptide transport, putative, expressed -
5 Sobic.010G019800 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
6 Sobic.005G060900 leucine rich repeat protein, putative, expressed -
7 Sobic.001G328000 phenazine biosynthesis protein, putative, expressed -
8 Sobic.003G031100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
9 Sobic.010G084000 OsPOP13 - Putative Prolyl Oligopeptidase homologue, expressed -
10 Sobic.002G024400 OsSCP28 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
11 Sobic.009G220800 NBS-LRR disease resistance protein, putative, expressed -
12 Sobic.006G226800 enzyme relate to 3-deoxyanthocyanidine pathway P/tan gene(PubMedID : 26994288)@leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
13 Sobic.009G073500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
14 Sobic.005G131700 - -
15 Sobic.008G182600 thaumatin, putative, expressed -
16 Sobic.002G303700 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
17 Sobic.008G146700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
18 Sobic.001G261600 cellulase, putative, expressed -
19 Sobic.005G216100 Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
20 Sobic.002G065800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic003G422400 Sobic003G422400 Sobic006G009600 Sobic006G009600 Sobic003G422400--Sobic006G009600 Sobic005G126200 Sobic005G126200 Sobic003G422400--Sobic005G126200 Sobic009G102300 Sobic009G102300 Sobic003G422400--Sobic009G102300 Sobic001G099400 Sobic001G099400 Sobic003G422400--Sobic001G099400 Sobic010G019800 Sobic010G019800 Sobic003G422400--Sobic010G019800 Sobic005G060900 Sobic005G060900 Sobic003G422400--Sobic005G060900 Sobic001G328000 Sobic001G328000 Sobic003G422400--Sobic001G328000 Sobic003G031100 Sobic003G031100 Sobic003G422400--Sobic003G031100 Sobic010G084000 Sobic010G084000 Sobic003G422400--Sobic010G084000 Sobic006G009600--Sobic003G422400 Sobic003G192600 Sobic003G192600 Sobic006G009600--Sobic003G192600 Sobic004G085500 Sobic004G085500 Sobic006G009600--Sobic004G085500 Sobic001G272900 Sobic001G272900 Sobic006G009600--Sobic001G272900 Sobic005G076500 Sobic005G076500 Sobic006G009600--Sobic005G076500 Sobic007G089900 Sobic007G089900 Sobic006G009600--Sobic007G089900 Sobic010G001300 Sobic010G001300 Sobic006G009600--Sobic010G001300 Sobic006G168100 Sobic006G168100 Sobic006G009600--Sobic006G168100 Sobic006G009600--Sobic010G019800 Sobic005G131700 Sobic005G131700 Sobic005G126200--Sobic005G131700 Sobic008G182600 Sobic008G182600 Sobic005G126200--Sobic008G182600 Sobic009G073500 Sobic009G073500 Sobic005G126200--Sobic009G073500 Sobic008G182800 Sobic008G182800 Sobic005G126200--Sobic008G182800 Sobic006G226800 Sobic006G226800 Sobic005G126200--Sobic006G226800 Sobic005G126200--Sobic003G031100 Sobic001G145700 Sobic001G145700 Sobic005G126200--Sobic001G145700 Sobic006G117400 Sobic006G117400 Sobic005G126200--Sobic006G117400 Sobic009G181200 Sobic009G181200 Sobic005G126200--Sobic009G181200 Sobic010G045400 Sobic010G045400 Sobic009G102300--Sobic010G045400 Sobic006G230300 Sobic006G230300 Sobic009G102300--Sobic006G230300 Sobic002G114800 Sobic002G114800 Sobic009G102300--Sobic002G114800 Sobic008G004100 Sobic008G004100 Sobic009G102300--Sobic008G004100 Sobic009G246100 Sobic009G246100 Sobic009G102300--Sobic009G246100 Sobic003G215200 Sobic003G215200 Sobic009G102300--Sobic003G215200 Sobic006G130501 Sobic006G130501 Sobic009G102300--Sobic006G130501 Sobic004G161900 Sobic004G161900 Sobic009G102300--Sobic004G161900 Sobic010G218300 Sobic010G218300 Sobic009G102300--Sobic010G218300 Sobic002G065800 Sobic002G065800 Sobic001G099400--Sobic002G065800 Sobic008G182400 Sobic008G182400 Sobic001G099400--Sobic008G182400 Sobic002G065500 Sobic002G065500 Sobic001G099400--Sobic002G065500 Sobic002G065600 Sobic002G065600 Sobic001G099400--Sobic002G065600 Sobic010G172800 Sobic010G172800 Sobic001G099400--Sobic010G172800 Sobic005G126100 Sobic005G126100 Sobic001G099400--Sobic005G126100 Sobic001G099400--Sobic006G117400 Sobic005G145950 Sobic005G145950 Sobic001G099400--Sobic005G145950 Sobic004G197100 Sobic004G197100 Sobic001G099400--Sobic004G197100 Sobic010G019800--Sobic010G084000 Sobic010G256800 Sobic010G256800 Sobic010G019800--Sobic010G256800 Sobic002G301500 Sobic002G301500 Sobic010G019800--Sobic002G301500 Sobic005G129400 Sobic005G129400 Sobic010G019800--Sobic005G129400 Sobic010G021000 Sobic010G021000 Sobic010G019800--Sobic010G021000 Sobic010G123400 Sobic010G123400 Sobic010G019800--Sobic010G123400 Sobic001G057200 Sobic001G057200 Sobic010G019800--Sobic001G057200 Sobic001G123000 Sobic001G123000 Sobic010G019800--Sobic001G123000 Sobic001G540100 Sobic001G540100 Sobic010G019800--Sobic001G540100 Sobic006G132100 Sobic006G132100 Sobic005G060900--Sobic006G132100 Sobic005G210300 Sobic005G210300 Sobic005G060900--Sobic005G210300 Sobic010G020200 Sobic010G020200 Sobic005G060900--Sobic010G020200 Sobic005G054300 Sobic005G054300 Sobic005G060900--Sobic005G054300 Sobic001G359400 Sobic001G359400 Sobic005G060900--Sobic001G359400 Sobic010G028950 Sobic010G028950 Sobic005G060900--Sobic010G028950 Sobic010G042900 Sobic010G042900 Sobic005G060900--Sobic010G042900 Sobic010G144000 Sobic010G144000 Sobic005G060900--Sobic010G144000 Sobic010G106800 Sobic010G106800 Sobic005G060900--Sobic010G106800 Sobic009G220800 Sobic009G220800 Sobic001G328000--Sobic009G220800 Sobic001G328000--Sobic002G114800 Sobic007G092600 Sobic007G092600 Sobic001G328000--Sobic007G092600 Sobic007G128600 Sobic007G128600 Sobic001G328000--Sobic007G128600 Sobic005G024900 Sobic005G024900 Sobic001G328000--Sobic005G024900 Sobic003G106300 Sobic003G106300 Sobic001G328000--Sobic003G106300 Sobic001G328000--Sobic001G540100 Sobic009G177400 Sobic009G177400 Sobic001G328000--Sobic009G177400 Sobic005G075600 Sobic005G075600 Sobic001G328000--Sobic005G075600 Sobic001G018400 Sobic001G018400 Sobic003G031100--Sobic001G018400 Sobic003G031100--Sobic005G126200 Sobic005G171100 Sobic005G171100 Sobic003G031100--Sobic005G171100 Sobic007G074400 Sobic007G074400 Sobic003G031100--Sobic007G074400 Sobic002G024400 Sobic002G024400 Sobic003G031100--Sobic002G024400 Sobic003G031100--Sobic009G073500 Sobic007G058900 Sobic007G058900 Sobic003G031100--Sobic007G058900 Sobic003G031100--Sobic005G131700 Sobic008G146700 Sobic008G146700 Sobic003G031100--Sobic008G146700 Sobic001G120300 Sobic001G120300 Sobic010G084000--Sobic001G120300 Sobic010G084000--Sobic010G256800 Sobic003G370200 Sobic003G370200 Sobic010G084000--Sobic003G370200 Sobic010G084000--Sobic010G021000 Sobic010G084000--Sobic010G019800 Sobic010G084000--Sobic002G301500 Sobic008G133400 Sobic008G133400 Sobic010G084000--Sobic008G133400 Sobic010G106900 Sobic010G106900 Sobic010G084000--Sobic010G106900 Sobic010G084000--Sobic001G057200
Octagon: transcription factors


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