Gene annotation
Transcriptome id Sobic.005G060900.2,Sobic.005G060900.4,Sobic.005G060900.3,Sobic.005G060900.1
Synonym Sb05g004935
Functional annotation leucine rich repeat protein, putative, expressed
UniProt A0A1B6PQF4
Pfam PF08263 PF13855
Panther DB PTHR27004 PTHR27004:SF31
NCBI CDD KOG0472; Leucine-rich repeat protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G34930 : disease resistance family protein / LRR family protein
RAP-DB (Rice) LOC_Os01g41770.1 : leucine rich repeat protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G132100 CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
2 Sobic.005G210300 - -
3 Sobic.010G020200 SCP-like extracellular protein, expressed -
4 Sobic.005G054300 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
5 Sobic.001G359400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
6 Sobic.010G028950 - -
7 Sobic.010G042900 expressed protein -
8 Sobic.010G144000 AP-3 complex subunit delta, putative, expressed K12396: AP-3 complex subunit delta
9 Sobic.010G106800 cytochrome P450, putative, expressed -
10 Sobic.005G072000 expressed protein K13457: RPM1, disease resistance protein RPM1
11 Sobic.001G181800 MBTB51 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
12 Sobic.005G210350 - -
13 Sobic.005G054600 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
14 Sobic.005G054000 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
15 Sobic.003G287100 NADPH reductase, putative, expressed -
16 Sobic.008G133300 unc-93 homolog A, putative, expressed -
17 Sobic.003G422400 amino acid permease family protein, putative, expressed -
18 Sobic.002G022900 OsWAK92 - OsWAK receptor-like protein kinase, expressed K04730: interleukin-1 receptor-associated kinase 1
19 Sobic.009G117400 protein kinase domain containing protein, expressed -
20 Sobic.009G117300 protein kinase APK1B, chloroplast precursor, putative, expressed -


Gene co-expression network
sample Sobic005G060900 Sobic005G060900 Sobic006G132100 Sobic006G132100 Sobic005G060900--Sobic006G132100 Sobic005G210300 Sobic005G210300 Sobic005G060900--Sobic005G210300 Sobic010G020200 Sobic010G020200 Sobic005G060900--Sobic010G020200 Sobic005G054300 Sobic005G054300 Sobic005G060900--Sobic005G054300 Sobic001G359400 Sobic001G359400 Sobic005G060900--Sobic001G359400 Sobic010G028950 Sobic010G028950 Sobic005G060900--Sobic010G028950 Sobic010G042900 Sobic010G042900 Sobic005G060900--Sobic010G042900 Sobic010G144000 Sobic010G144000 Sobic005G060900--Sobic010G144000 Sobic010G106800 Sobic010G106800 Sobic005G060900--Sobic010G106800 Sobic006G132100--Sobic010G042900 Sobic001G221100 Sobic001G221100 Sobic006G132100--Sobic001G221100 Sobic004G164650 Sobic004G164650 Sobic006G132100--Sobic004G164650 Sobic005G012000 Sobic005G012000 Sobic006G132100--Sobic005G012000 Sobic009G117300 Sobic009G117300 Sobic006G132100--Sobic009G117300 Sobic008G126200 Sobic008G126200 Sobic006G132100--Sobic008G126200 Sobic009G117400 Sobic009G117400 Sobic006G132100--Sobic009G117400 Sobic003G422000 Sobic003G422000 Sobic006G132100--Sobic003G422000 Sobic001G347600 Sobic001G347600 Sobic006G132100--Sobic001G347600 Sobic001G271000 Sobic001G271000 Sobic005G210300--Sobic001G271000 Sobic009G101600 Sobic009G101600 Sobic005G210300--Sobic009G101600 Sobic005G210300--Sobic005G054300 Sobic009G026400 Sobic009G026400 Sobic005G210300--Sobic009G026400 Sobic005G142200 Sobic005G142200 Sobic005G210300--Sobic005G142200 Sobic005G054600 Sobic005G054600 Sobic005G210300--Sobic005G054600 Sobic002G060500 Sobic002G060500 Sobic005G210300--Sobic002G060500 Sobic005G085100 Sobic005G085100 Sobic005G210300--Sobic005G085100 Sobic004G092300 Sobic004G092300 Sobic005G210300--Sobic004G092300 Sobic010G020200--Sobic005G210300 Sobic008G182400 Sobic008G182400 Sobic010G020200--Sobic008G182400 Sobic008G182800 Sobic008G182800 Sobic010G020200--Sobic008G182800 Sobic010G020200--Sobic003G422000 Sobic006G117400 Sobic006G117400 Sobic010G020200--Sobic006G117400 Sobic009G181200 Sobic009G181200 Sobic010G020200--Sobic009G181200 Sobic004G036200 Sobic004G036200 Sobic010G020200--Sobic004G036200 Sobic010G172800 Sobic010G172800 Sobic010G020200--Sobic010G172800 Sobic010G240400 Sobic010G240400 Sobic010G020200--Sobic010G240400 Sobic005G054300--Sobic005G054600 Sobic005G054000 Sobic005G054000 Sobic005G054300--Sobic005G054000 Sobic005G054300--Sobic009G026400 Sobic005G054300--Sobic009G101600 Sobic005G054300--Sobic005G142200 Sobic002G062300 Sobic002G062300 Sobic005G054300--Sobic002G062300 Sobic005G212600 Sobic005G212600 Sobic005G054300--Sobic005G212600 Sobic001G305400 Sobic001G305400 Sobic005G054300--Sobic001G305400 Sobic002G221200 Sobic002G221200 Sobic005G054300--Sobic002G221200 Sobic009G235900 Sobic009G235900 Sobic001G359400--Sobic009G235900 Sobic010G078100 Sobic010G078100 Sobic001G359400--Sobic010G078100 Sobic005G007800 Sobic005G007800 Sobic001G359400--Sobic005G007800 Sobic001G359400--Sobic010G042900 Sobic002G303000 Sobic002G303000 Sobic001G359400--Sobic002G303000 Sobic002G009600 Sobic002G009600 Sobic001G359400--Sobic002G009600 Sobic001G359400--Sobic001G347600 Sobic001G373100 Sobic001G373100 Sobic001G359400--Sobic001G373100 Sobic008G160700 Sobic008G160700 Sobic001G359400--Sobic008G160700 Sobic010G028950--Sobic005G212600 Sobic008G009500 Sobic008G009500 Sobic010G028950--Sobic008G009500 Sobic003G208700 Sobic003G208700 Sobic010G028950--Sobic003G208700 Sobic010G028950--Sobic010G144000 Sobic005G203400 Sobic005G203400 Sobic010G028950--Sobic005G203400 Sobic010G028950--Sobic002G062300 Sobic004G076732 Sobic004G076732 Sobic010G028950--Sobic004G076732 Sobic001G253100 Sobic001G253100 Sobic010G028950--Sobic001G253100 Sobic010G028950--Sobic004G092300 Sobic003G093600 Sobic003G093600 Sobic010G042900--Sobic003G093600 Sobic007G023700 Sobic007G023700 Sobic010G042900--Sobic007G023700 Sobic010G042900--Sobic001G347600 Sobic010G042900--Sobic005G007800 Sobic004G034400 Sobic004G034400 Sobic010G042900--Sobic004G034400 Sobic001G028700 Sobic001G028700 Sobic010G042900--Sobic001G028700 Sobic010G042900--Sobic009G235900 Sobic010G042900--Sobic009G117400 Sobic006G129700 Sobic006G129700 Sobic010G042900--Sobic006G129700 Sobic003G436900 Sobic003G436900 Sobic010G144000--Sobic003G436900 Sobic010G144000--Sobic005G142200 Sobic010G144000--Sobic002G221200 Sobic004G317600 Sobic004G317600 Sobic010G144000--Sobic004G317600 Sobic004G121000 Sobic004G121000 Sobic010G144000--Sobic004G121000 Sobic001G240400 Sobic001G240400 Sobic010G144000--Sobic001G240400 Sobic010G144000--Sobic004G092300 Sobic010G144000--Sobic001G305400 Sobic008G045600 Sobic008G045600 Sobic010G144000--Sobic008G045600 Sobic005G043400 Sobic005G043400 Sobic010G106800--Sobic005G043400 Sobic010G106800--Sobic009G101600 Sobic010G068200 Sobic010G068200 Sobic010G106800--Sobic010G068200 Sobic010G106800--Sobic001G271000 Sobic005G043800 Sobic005G043800 Sobic010G106800--Sobic005G043800 Sobic005G148400 Sobic005G148400 Sobic010G106800--Sobic005G148400 Sobic010G106800--Sobic008G045600 Sobic010G106800--Sobic005G210300 Sobic004G196500 Sobic004G196500 Sobic010G106800--Sobic004G196500
Octagon: transcription factors


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