Gene annotation
Transcriptome id Sobic.006G132100.2
Synonym ATCHITIV, Sb06g021210, EP3, ATEP3, CHIV
Functional annotation CHIT3 - Chitinase family protein precursor, expressed
UniProt A0A1Z5RDM9
Pfam PF00182
Panther DB PTHR22595 PTHR22595:SF60
NCBI CDD KOG4742; Predicted chitinase
KEGG Orthology K01183; chitinase
Gene Ontology GO:0016998; cell wall macromolecule catabolic process GO:0006032chitin catabolic process GO:0004568chitinase activity


Orthologs (automatic annotation)
TAIR AT3G54420 : homolog of carrot EP3-3 chitinase
RAP-DB (Rice) LOC_Os04g41620.1 : CHIT2 - Chitinase family protein precursor, expressed
MaizeGDB (Corn) Zm00025a010855 , Zm00025a010854 , Zm00025a010853 , Zm00025a056371
Brachypodium KQK04002
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G042900 expressed protein -
2 Sobic.001G221100 ubiquitin family protein, putative, expressed K08770: ubiquitin C
3 Sobic.004G164650 - -
4 Sobic.005G012000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
5 Sobic.009G117300 protein kinase APK1B, chloroplast precursor, putative, expressed -
6 Sobic.008G126200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin binding protein, putative, expressed -
7 Sobic.009G117400 protein kinase domain containing protein, expressed -
8 Sobic.003G422000 "Glucan endo-1,3-beta-d-glucosidase"(PubMedID : 24906815)@"beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
9 Sobic.001G347600 paramyosin, putative, expressed -
10 Sobic.008G108900 GRF zinc finger family protein, expressed -
11 Sobic.005G212600 NBS-LRR disease resistance protein, putative, expressed -
12 Sobic.005G054300 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
13 Sobic.009G235900 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
14 Sobic.001G192900 DNA excision repair protein ERCC-1, putative, expressed K10849: DNA excision repair protein ERCC-1
15 Sobic.006G132200 CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
16 Sobic.010G028950 - -
17 Sobic.005G054600 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
18 Sobic.002G039500 expressed protein -
19 Sobic.002G062300 expressed protein -
20 Sobic.007G023700 MA3 domain containing protein, expressed -


Gene co-expression network
sample Sobic006G132100 Sobic006G132100 Sobic010G042900 Sobic010G042900 Sobic006G132100--Sobic010G042900 Sobic001G221100 Sobic001G221100 Sobic006G132100--Sobic001G221100 Sobic004G164650 Sobic004G164650 Sobic006G132100--Sobic004G164650 Sobic005G012000 Sobic005G012000 Sobic006G132100--Sobic005G012000 Sobic009G117300 Sobic009G117300 Sobic006G132100--Sobic009G117300 Sobic008G126200 Sobic008G126200 Sobic006G132100--Sobic008G126200 Sobic009G117400 Sobic009G117400 Sobic006G132100--Sobic009G117400 Sobic003G422000 Sobic003G422000 Sobic006G132100--Sobic003G422000 Sobic001G347600 Sobic001G347600 Sobic006G132100--Sobic001G347600 Sobic003G093600 Sobic003G093600 Sobic010G042900--Sobic003G093600 Sobic007G023700 Sobic007G023700 Sobic010G042900--Sobic007G023700 Sobic010G042900--Sobic001G347600 Sobic005G007800 Sobic005G007800 Sobic010G042900--Sobic005G007800 Sobic004G034400 Sobic004G034400 Sobic010G042900--Sobic004G034400 Sobic001G028700 Sobic001G028700 Sobic010G042900--Sobic001G028700 Sobic009G235900 Sobic009G235900 Sobic010G042900--Sobic009G235900 Sobic010G042900--Sobic009G117400 Sobic006G129700 Sobic006G129700 Sobic010G042900--Sobic006G129700 Sobic001G039700 Sobic001G039700 Sobic001G221100--Sobic001G039700 Sobic009G032300 Sobic009G032300 Sobic001G221100--Sobic009G032300 Sobic001G221100--Sobic010G042900 Sobic003G145900 Sobic003G145900 Sobic001G221100--Sobic003G145900 Sobic004G027100 Sobic004G027100 Sobic001G221100--Sobic004G027100 Sobic001G221100--Sobic004G034400 Sobic004G330900 Sobic004G330900 Sobic001G221100--Sobic004G330900 Sobic005G014950 Sobic005G014950 Sobic001G221100--Sobic005G014950 Sobic002G197100 Sobic002G197100 Sobic001G221100--Sobic002G197100 Sobic007G115000 Sobic007G115000 Sobic004G164650--Sobic007G115000 Sobic002G285200 Sobic002G285200 Sobic004G164650--Sobic002G285200 Sobic005G212600 Sobic005G212600 Sobic004G164650--Sobic005G212600 Sobic004G076732 Sobic004G076732 Sobic004G164650--Sobic004G076732 Sobic001G253100 Sobic001G253100 Sobic004G164650--Sobic001G253100 Sobic008G108900 Sobic008G108900 Sobic004G164650--Sobic008G108900 Sobic004G195700 Sobic004G195700 Sobic004G164650--Sobic004G195700 Sobic006G132200 Sobic006G132200 Sobic004G164650--Sobic006G132200 Sobic003G424100 Sobic003G424100 Sobic004G164650--Sobic003G424100 Sobic003G044900 Sobic003G044900 Sobic005G012000--Sobic003G044900 Sobic002G039500 Sobic002G039500 Sobic005G012000--Sobic002G039500 Sobic006G184300 Sobic006G184300 Sobic005G012000--Sobic006G184300 Sobic005G012000--Sobic007G023700 Sobic005G012000--Sobic003G093600 Sobic005G012000--Sobic008G126200 Sobic006G194150 Sobic006G194150 Sobic005G012000--Sobic006G194150 Sobic002G221700 Sobic002G221700 Sobic005G012000--Sobic002G221700 Sobic007G073400 Sobic007G073400 Sobic005G012000--Sobic007G073400 Sobic009G117300--Sobic009G117400 Sobic004G271900 Sobic004G271900 Sobic009G117300--Sobic004G271900 Sobic009G225200 Sobic009G225200 Sobic009G117300--Sobic009G225200 Sobic010G263800 Sobic010G263800 Sobic009G117300--Sobic010G263800 Sobic004G057400 Sobic004G057400 Sobic009G117300--Sobic004G057400 Sobic008G034600 Sobic008G034600 Sobic009G117300--Sobic008G034600 Sobic006G209500 Sobic006G209500 Sobic009G117300--Sobic006G209500 Sobic004G256600 Sobic004G256600 Sobic009G117300--Sobic004G256600 Sobic007G205800 Sobic007G205800 Sobic009G117300--Sobic007G205800 Sobic008G126200--Sobic006G184300 SobicK024000 SobicK024000 Sobic008G126200--SobicK024000 Sobic002G270300 Sobic002G270300 Sobic008G126200--Sobic002G270300 Sobic008G126200--Sobic007G023700 Sobic008G009500 Sobic008G009500 Sobic008G126200--Sobic008G009500 Sobic008G126200--Sobic001G347600 Sobic008G126200--Sobic005G012000 Sobic008G126200--Sobic003G093600 Sobic002G108800 Sobic002G108800 Sobic008G126200--Sobic002G108800 Sobic009G117400--Sobic009G117300 Sobic009G117400--Sobic004G271900 Sobic009G117400--Sobic010G263800 Sobic009G117400--Sobic007G205800 Sobic009G117400--Sobic004G256600 Sobic009G117400--Sobic008G034600 Sobic009G117400--Sobic001G347600 Sobic009G117400--Sobic004G057400 Sobic009G117400--Sobic006G209500 Sobic003G422000--Sobic008G108900 Sobic003G422000--Sobic006G132200 Sobic002G062300 Sobic002G062300 Sobic003G422000--Sobic002G062300 Sobic007G059300 Sobic007G059300 Sobic003G422000--Sobic007G059300 Sobic009G113600 Sobic009G113600 Sobic003G422000--Sobic009G113600 Sobic002G051400 Sobic002G051400 Sobic003G422000--Sobic002G051400 Sobic003G422000--Sobic005G212600 Sobic003G422000--Sobic007G115000 Sobic007G094600 Sobic007G094600 Sobic003G422000--Sobic007G094600 Sobic001G347600--Sobic010G263800 Sobic001G347600--Sobic007G023700 Sobic004G143700 Sobic004G143700 Sobic001G347600--Sobic004G143700 Sobic002G077200 Sobic002G077200 Sobic001G347600--Sobic002G077200 Sobic001G347600--Sobic009G117400 Sobic007G035600 Sobic007G035600 Sobic001G347600--Sobic007G035600 Sobic001G347600--Sobic007G073400 Sobic001G347600--Sobic007G205800 SobicK016900 SobicK016900 Sobic001G347600--SobicK016900
Octagon: transcription factors


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