Gene annotation
Transcriptome id Sobic.008G133300.1,Sobic.008G133300.3
Synonym Sb08g018540
Functional annotation unc-93 homolog A, putative, expressed
UniProt C5YPW8 , A0A1Z5R7B0
Pfam PF05978
Panther DB PTHR19444 PTHR19444:SF13
NCBI CDD KOG3097; Predicted membrane protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G09470 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os12g37939.1 : unc-93 homolog A, putative, expressed
MaizeGDB (Corn) Zm00025a004202
Brachypodium KQJ86213 , KQJ86214 , PNT62477
Barley HORVU5Hr1G021780.11 , HORVU5Hr1G021780.10 , HORVU5Hr1G021780.12 , HORVU5Hr1G021780.9 , HORVU5Hr1G021780.8 , HORVU5Hr1G021780.1 , HORVU5Hr1G021780.3 , HORVU5Hr1G021780.5 , HORVU5Hr1G021780.4 , HORVU5Hr1G021780.7 , HORVU5Hr1G021780.6
Wheat TraesCS5D02G095800 , TraesCS5B02G089400 , TraesCS5B02G089400 , TraesCS5A02G083600 , TraesCS5A02G083600 , TraesCS5D02G095800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G313400 expressed protein -
2 Sobic.007G225200 2-nitropropane dioxygenase family, putative, expressed -
3 Sobic.007G203500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor, putative, expressed -
4 Sobic.002G303000 disease resistant protein, identical, putative, expressed -
5 Sobic.001G359400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
6 Sobic.009G121100 expressed protein -
7 Sobic.005G007800 F-box/LRR-repeat protein 3, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
8 Sobic.009G040700 "OsPPKL2(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659919)@serine/threonine protein phosphatase, putative, expressed K01090: protein phosphatase
9 Sobic.006G028200 glycine-rich protein, putative, expressed -
10 Sobic.004G012000 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed -
11 Sobic.010G078100 pantothenate kinase, putative, expressed K09680: type II pantothenate kinase
12 Sobic.003G370200 ion channel DMI1, chloroplast precursor, putative, expressed -
13 Sobic.008G133400 unc-93 homolog A, putative, expressed -
14 Sobic.004G048000 DUF292 domain containing protein, expressed -
15 Sobic.003G401000 adaptin, putative, expressed K12400: AP-4 complex subunit epsilon-1
16 Sobic.007G071950 - -
17 Sobic.005G019200 rp3 protein, putative, expressed -
18 Sobic.008G024600 expressed protein -
19 Sobic.010G276800 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
20 Sobic.007G072000 disease resistance protein RGA3, putative, expressed -


Gene co-expression network
sample Sobic008G133300 Sobic008G133300 Sobic003G313400 Sobic003G313400 Sobic008G133300--Sobic003G313400 Sobic007G225200 Sobic007G225200 Sobic008G133300--Sobic007G225200 Sobic007G203500 Sobic007G203500 Sobic008G133300--Sobic007G203500 Sobic002G303000 Sobic002G303000 Sobic008G133300--Sobic002G303000 Sobic001G359400 Sobic001G359400 Sobic008G133300--Sobic001G359400 Sobic009G121100 Sobic009G121100 Sobic008G133300--Sobic009G121100 Sobic005G007800 Sobic005G007800 Sobic008G133300--Sobic005G007800 Sobic009G040700 Sobic009G040700 Sobic008G133300--Sobic009G040700 Sobic006G028200 Sobic006G028200 Sobic008G133300--Sobic006G028200 Sobic004G358400 Sobic004G358400 Sobic003G313400--Sobic004G358400 Sobic003G313400--Sobic007G203500 Sobic004G002400 Sobic004G002400 Sobic003G313400--Sobic004G002400 Sobic003G331400 Sobic003G331400 Sobic003G313400--Sobic003G331400 Sobic004G354400 Sobic004G354400 Sobic003G313400--Sobic004G354400 Sobic004G002100 Sobic004G002100 Sobic003G313400--Sobic004G002100 Sobic009G229600 Sobic009G229600 Sobic003G313400--Sobic009G229600 Sobic005G026200 Sobic005G026200 Sobic003G313400--Sobic005G026200 Sobic006G245400 Sobic006G245400 Sobic003G313400--Sobic006G245400 Sobic002G058400 Sobic002G058400 Sobic007G225200--Sobic002G058400 Sobic005G013000 Sobic005G013000 Sobic007G225200--Sobic005G013000 Sobic003G267800 Sobic003G267800 Sobic007G225200--Sobic003G267800 Sobic009G135800 Sobic009G135800 Sobic007G225200--Sobic009G135800 Sobic007G225200--Sobic009G040700 Sobic003G258900 Sobic003G258900 Sobic007G225200--Sobic003G258900 Sobic001G017600 Sobic001G017600 Sobic007G225200--Sobic001G017600 Sobic002G396000 Sobic002G396000 Sobic007G225200--Sobic002G396000 Sobic002G158700 Sobic002G158700 Sobic007G225200--Sobic002G158700 Sobic010G017800 Sobic010G017800 Sobic007G203500--Sobic010G017800 Sobic003G126600 Sobic003G126600 Sobic007G203500--Sobic003G126600 Sobic003G401000 Sobic003G401000 Sobic007G203500--Sobic003G401000 Sobic006G052500 Sobic006G052500 Sobic007G203500--Sobic006G052500 Sobic001G539016 Sobic001G539016 Sobic007G203500--Sobic001G539016 Sobic007G203500--Sobic003G313400 Sobic009G257800 Sobic009G257800 Sobic007G203500--Sobic009G257800 Sobic007G203500--Sobic009G229600 Sobic010G106900 Sobic010G106900 Sobic007G203500--Sobic010G106900 Sobic010G078100 Sobic010G078100 Sobic002G303000--Sobic010G078100 Sobic002G303000--Sobic009G121100 Sobic008G160700 Sobic008G160700 Sobic002G303000--Sobic008G160700 Sobic003G407300 Sobic003G407300 Sobic002G303000--Sobic003G407300 Sobic002G303000--Sobic009G040700 Sobic002G303000--Sobic005G007800 Sobic004G196700 Sobic004G196700 Sobic002G303000--Sobic004G196700 Sobic009G235900 Sobic009G235900 Sobic002G303000--Sobic009G235900 Sobic008G024600 Sobic008G024600 Sobic002G303000--Sobic008G024600 Sobic001G359400--Sobic009G235900 Sobic001G359400--Sobic010G078100 Sobic001G359400--Sobic005G007800 Sobic010G042900 Sobic010G042900 Sobic001G359400--Sobic010G042900 Sobic001G359400--Sobic002G303000 Sobic002G009600 Sobic002G009600 Sobic001G359400--Sobic002G009600 Sobic001G347600 Sobic001G347600 Sobic001G359400--Sobic001G347600 Sobic001G373100 Sobic001G373100 Sobic001G359400--Sobic001G373100 Sobic001G359400--Sobic008G160700 Sobic006G214500 Sobic006G214500 Sobic009G121100--Sobic006G214500 Sobic009G121100--Sobic003G407300 Sobic003G019100 Sobic003G019100 Sobic009G121100--Sobic003G019100 Sobic001G156100 Sobic001G156100 Sobic009G121100--Sobic001G156100 Sobic001G443900 Sobic001G443900 Sobic009G121100--Sobic001G443900 Sobic001G373200 Sobic001G373200 Sobic009G121100--Sobic001G373200 Sobic009G121100--Sobic010G078100 Sobic004G295800 Sobic004G295800 Sobic009G121100--Sobic004G295800 Sobic009G121100--Sobic002G303000 Sobic005G007800--Sobic009G235900 Sobic005G007800--Sobic010G042900 Sobic005G007800--Sobic002G303000 Sobic003G145900 Sobic003G145900 Sobic005G007800--Sobic003G145900 Sobic005G007800--Sobic001G359400 Sobic005G007800--Sobic009G040700 Sobic004G143700 Sobic004G143700 Sobic005G007800--Sobic004G143700 Sobic005G007800--Sobic010G078100 Sobic001G424700 Sobic001G424700 Sobic005G007800--Sobic001G424700 Sobic001G094000 Sobic001G094000 Sobic009G040700--Sobic001G094000 Sobic003G187400 Sobic003G187400 Sobic009G040700--Sobic003G187400 Sobic005G149500 Sobic005G149500 Sobic009G040700--Sobic005G149500 Sobic007G011400 Sobic007G011400 Sobic009G040700--Sobic007G011400 Sobic002G157300 Sobic002G157300 Sobic009G040700--Sobic002G157300 Sobic001G477800 Sobic001G477800 Sobic009G040700--Sobic001G477800 Sobic006G145000 Sobic006G145000 Sobic009G040700--Sobic006G145000 Sobic009G040700--Sobic004G196700 Sobic008G078100 Sobic008G078100 Sobic009G040700--Sobic008G078100 Sobic006G028200--Sobic003G401000 Sobic006G028200--Sobic001G094000 Sobic006G028200--Sobic009G040700 Sobic010G189000 Sobic010G189000 Sobic006G028200--Sobic010G189000 Sobic006G028200--Sobic003G187400 Sobic006G046700 Sobic006G046700 Sobic006G028200--Sobic006G046700 Sobic001G296500 Sobic001G296500 Sobic006G028200--Sobic001G296500 Sobic003G036900 Sobic003G036900 Sobic006G028200--Sobic003G036900 Sobic006G028200--Sobic001G477800
Octagon: transcription factors


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