Gene annotation
Transcriptome id Sobic.004G012000.1
Synonym FEY, FEY3, Sb04g001190
Functional annotation oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed
UniProt C5XSB1
Pfam PF08659
Panther DB PTHR24320 PTHR24320:SF73
NCBI CDD KOG1208; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G27760 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os02g02470.1 : oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a018709 , Zm00025a035061
Brachypodium KQJ92908 , KQJ92909
Barley -
Wheat TraesCS6B02G060600 , TraesCS6A02G045200 , TraesCS6D02G051500
Populus -


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cDNA sequences
Sobic.004G012000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G154700 OsFBX407 - F-box domain containing protein, expressed -
2 Sobic.004G088400 GTPase-activating protein, putative, expressed -
3 Sobic.001G296500 ARABIDILLO-1, putative, expressed -
4 Sobic.008G117200 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
5 Sobic.003G336800 expressed protein -
6 Sobic.003G239900 ketol-acid reductoisomerase, chloroplast precursor, putative, expressed K00053: ketol-acid reductoisomerase
7 Sobic.004G026100 tRNA methyltransferase, putative, expressed K03439: trmB, METTL1, tRNA (guanine-N7-)-methyltransferase
8 Sobic.002G197100 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
9 Sobic.007G095200 ATPase, AFG1 family domain containing protein, expressed K18798: AFG1, peroxisome-assembly ATPase
10 Sobic.006G028200 glycine-rich protein, putative, expressed -
11 Sobic.004G048000 DUF292 domain containing protein, expressed -
12 Sobic.007G079200 exonuclease, putative, expressed -
13 Sobic.003G401000 adaptin, putative, expressed K12400: AP-4 complex subunit epsilon-1
14 Sobic.006G217200 PPR repeat domain containing protein, putative, expressed -
15 Sobic.002G158700 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6
16 Sobic.002G177400 expressed protein -
17 Sobic.006G046700 vacuolar protein sorting-associated protein 11, putative, expressed -
18 Sobic.004G031700 expressed protein -
19 Sobic.001G192900 DNA excision repair protein ERCC-1, putative, expressed K10849: DNA excision repair protein ERCC-1
20 Sobic.004G270000 coatomer subunit delta, putative, expressed -


Gene co-expression network
sample Sobic004G012000 Sobic004G012000 Sobic005G154700 Sobic005G154700 Sobic004G012000--Sobic005G154700 Sobic004G088400 Sobic004G088400 Sobic004G012000--Sobic004G088400 Sobic001G296500 Sobic001G296500 Sobic004G012000--Sobic001G296500 Sobic008G117200 Sobic008G117200 Sobic004G012000--Sobic008G117200 Sobic003G336800 Sobic003G336800 Sobic004G012000--Sobic003G336800 Sobic003G239900 Sobic003G239900 Sobic004G012000--Sobic003G239900 Sobic004G026100 Sobic004G026100 Sobic004G012000--Sobic004G026100 Sobic002G197100 Sobic002G197100 Sobic004G012000--Sobic002G197100 Sobic007G095200 Sobic007G095200 Sobic004G012000--Sobic007G095200 Sobic005G154700--Sobic004G012000 Sobic005G154700--Sobic004G026100 Sobic004G197900 Sobic004G197900 Sobic005G154700--Sobic004G197900 Sobic009G040800 Sobic009G040800 Sobic005G154700--Sobic009G040800 Sobic005G015100 Sobic005G015100 Sobic005G154700--Sobic005G015100 Sobic005G127300 Sobic005G127300 Sobic005G154700--Sobic005G127300 Sobic009G000400 Sobic009G000400 Sobic005G154700--Sobic009G000400 Sobic010G235600 Sobic010G235600 Sobic005G154700--Sobic010G235600 Sobic007G079200 Sobic007G079200 Sobic005G154700--Sobic007G079200 Sobic002G177400 Sobic002G177400 Sobic004G088400--Sobic002G177400 Sobic007G008800 Sobic007G008800 Sobic004G088400--Sobic007G008800 Sobic004G088400--Sobic003G336800 Sobic004G088400--Sobic008G117200 Sobic003G026300 Sobic003G026300 Sobic004G088400--Sobic003G026300 Sobic003G346000 Sobic003G346000 Sobic004G088400--Sobic003G346000 Sobic008G129700 Sobic008G129700 Sobic004G088400--Sobic008G129700 Sobic007G116400 Sobic007G116400 Sobic004G088400--Sobic007G116400 Sobic009G030300 Sobic009G030300 Sobic004G088400--Sobic009G030300 Sobic003G401000 Sobic003G401000 Sobic001G296500--Sobic003G401000 Sobic001G094000 Sobic001G094000 Sobic001G296500--Sobic001G094000 Sobic003G084900 Sobic003G084900 Sobic001G296500--Sobic003G084900 Sobic001G296500--Sobic003G336800 Sobic010G166000 Sobic010G166000 Sobic001G296500--Sobic010G166000 Sobic004G031700 Sobic004G031700 Sobic001G296500--Sobic004G031700 Sobic002G158700 Sobic002G158700 Sobic001G296500--Sobic002G158700 Sobic001G514000 Sobic001G514000 Sobic001G296500--Sobic001G514000 Sobic002G157300 Sobic002G157300 Sobic001G296500--Sobic002G157300 Sobic010G263800 Sobic010G263800 Sobic008G117200--Sobic010G263800 Sobic008G034600 Sobic008G034600 Sobic008G117200--Sobic008G034600 Sobic008G117200--Sobic001G094000 Sobic008G117200--Sobic004G088400 Sobic008G117200--Sobic002G177400 Sobic002G421700 Sobic002G421700 Sobic008G117200--Sobic002G421700 Sobic008G117200--Sobic007G116400 Sobic007G011400 Sobic007G011400 Sobic008G117200--Sobic007G011400 Sobic001G477800 Sobic001G477800 Sobic008G117200--Sobic001G477800 Sobic003G336800--Sobic004G088400 Sobic003G336800--Sobic008G129700 Sobic002G061400 Sobic002G061400 Sobic003G336800--Sobic002G061400 Sobic010G174800 Sobic010G174800 Sobic003G336800--Sobic010G174800 Sobic003G336800--Sobic001G296500 Sobic010G202600 Sobic010G202600 Sobic003G336800--Sobic010G202600 Sobic010G199800 Sobic010G199800 Sobic003G336800--Sobic010G199800 Sobic006G128800 Sobic006G128800 Sobic003G336800--Sobic006G128800 Sobic003G336800--Sobic007G008800 Sobic003G239900--Sobic008G117200 Sobic003G267800 Sobic003G267800 Sobic003G239900--Sobic003G267800 Sobic009G175900 Sobic009G175900 Sobic003G239900--Sobic009G175900 Sobic006G217200 Sobic006G217200 Sobic003G239900--Sobic006G217200 Sobic008G078100 Sobic008G078100 Sobic003G239900--Sobic008G078100 Sobic001G371000 Sobic001G371000 Sobic003G239900--Sobic001G371000 Sobic003G239900--Sobic002G421700 Sobic001G039700 Sobic001G039700 Sobic003G239900--Sobic001G039700 Sobic003G239900--Sobic004G031700 Sobic004G026100--Sobic001G371000 Sobic004G026100--Sobic005G154700 Sobic003G248500 Sobic003G248500 Sobic004G026100--Sobic003G248500 Sobic004G026100--Sobic009G030300 Sobic005G009200 Sobic005G009200 Sobic004G026100--Sobic005G009200 Sobic004G026100--Sobic002G421700 Sobic004G026100--Sobic009G040800 Sobic004G026100--Sobic008G117200 Sobic004G026100--Sobic004G197900 Sobic004G007300 Sobic004G007300 Sobic002G197100--Sobic004G007300 Sobic006G173100 Sobic006G173100 Sobic002G197100--Sobic006G173100 Sobic004G345700 Sobic004G345700 Sobic002G197100--Sobic004G345700 Sobic001G176200 Sobic001G176200 Sobic002G197100--Sobic001G176200 Sobic001G090400 Sobic001G090400 Sobic002G197100--Sobic001G090400 Sobic001G425000 Sobic001G425000 Sobic002G197100--Sobic001G425000 Sobic002G197100--Sobic003G248500 Sobic002G197100--Sobic001G514000 Sobic002G370900 Sobic002G370900 Sobic002G197100--Sobic002G370900 Sobic006G046700 Sobic006G046700 Sobic007G095200--Sobic006G046700 Sobic007G095200--Sobic003G336800 Sobic007G185900 Sobic007G185900 Sobic007G095200--Sobic007G185900 Sobic001G405300 Sobic001G405300 Sobic007G095200--Sobic001G405300 Sobic006G028200 Sobic006G028200 Sobic007G095200--Sobic006G028200 Sobic005G059100 Sobic005G059100 Sobic007G095200--Sobic005G059100 Sobic007G095200--Sobic001G296500 Sobic007G095200--Sobic004G012000 Sobic007G026000 Sobic007G026000 Sobic007G095200--Sobic007G026000
Octagon: transcription factors


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