Gene annotation
Transcriptome id Sobic.007G071950.1
Synonym -
Functional annotation -
UniProt A0A1Z5R9D1
Pfam PF00560
Panther DB PTHR23155 PTHR23155:SF557
NCBI CDD KOG4579; Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G69550 : disease resistance protein (TIR-NBS-LRR class)
RAP-DB (Rice) LOC_Os11g10760.1 : NBS-LRR disease resistance protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT71835
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G072000 disease resistance protein RGA3, putative, expressed -
2 Sobic.009G117400 protein kinase domain containing protein, expressed -
3 Sobic.008G055432 - -
4 Sobic.009G040700 "OsPPKL2(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659919)@serine/threonine protein phosphatase, putative, expressed K01090: protein phosphatase
5 Sobic.001G464200 flap endonuclease, putative, expressed K10846: ERCC5, XPG, DNA excision repair protein ERCC-5
6 Sobic.006G009400 G-patch domain containing protein, expressed -
7 Sobic.010G263800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein(PubMedID : 28640841)@UPF0183 protein, putative, expressed -
8 Sobic.005G141801 - -
9 Sobic.004G256600 KH domain containing protein, putative, expressed K14945: protein quaking
10 Sobic.002G158700 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6
11 Sobic.001G111900 - -
12 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
13 Sobic.004G005400 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed K12854: SNRNP200, pre-mRNA-splicing helicase BRR2
14 Sobic.010G056000 GAGA-binding protein, putative, expressed -
15 Sobic.004G271900 RMD5 homolog A, putative, expressed -
16 Sobic.005G015100 OsFBX291 - F-box domain containing protein, expressed -
17 Sobic.007G031800 expressed protein -
18 Sobic.003G176400 - -
19 Sobic.001G454401 - -
20 Sobic.009G117300 protein kinase APK1B, chloroplast precursor, putative, expressed -


Gene co-expression network
sample Sobic007G071950 Sobic007G071950 Sobic007G072000 Sobic007G072000 Sobic007G071950--Sobic007G072000 Sobic009G117400 Sobic009G117400 Sobic007G071950--Sobic009G117400 Sobic008G055432 Sobic008G055432 Sobic007G071950--Sobic008G055432 Sobic009G040700 Sobic009G040700 Sobic007G071950--Sobic009G040700 Sobic001G464200 Sobic001G464200 Sobic007G071950--Sobic001G464200 Sobic006G009400 Sobic006G009400 Sobic007G071950--Sobic006G009400 Sobic010G263800 Sobic010G263800 Sobic007G071950--Sobic010G263800 Sobic005G141801 Sobic005G141801 Sobic007G071950--Sobic005G141801 Sobic004G256600 Sobic004G256600 Sobic007G071950--Sobic004G256600 Sobic007G072000--Sobic007G071950 Sobic007G072000--Sobic009G040700 Sobic005G013000 Sobic005G013000 Sobic007G072000--Sobic005G013000 Sobic007G072000--Sobic008G055432 Sobic001G454401 Sobic001G454401 Sobic007G072000--Sobic001G454401 Sobic003G056100 Sobic003G056100 Sobic007G072000--Sobic003G056100 Sobic007G072000--Sobic001G464200 Sobic003G258400 Sobic003G258400 Sobic007G072000--Sobic003G258400 Sobic007G072000--Sobic009G117400 Sobic009G117300 Sobic009G117300 Sobic009G117400--Sobic009G117300 Sobic004G271900 Sobic004G271900 Sobic009G117400--Sobic004G271900 Sobic009G117400--Sobic010G263800 Sobic007G205800 Sobic007G205800 Sobic009G117400--Sobic007G205800 Sobic009G117400--Sobic004G256600 Sobic008G034600 Sobic008G034600 Sobic009G117400--Sobic008G034600 Sobic001G347600 Sobic001G347600 Sobic009G117400--Sobic001G347600 Sobic004G057400 Sobic004G057400 Sobic009G117400--Sobic004G057400 Sobic006G209500 Sobic006G209500 Sobic009G117400--Sobic006G209500 Sobic008G055366 Sobic008G055366 Sobic008G055432--Sobic008G055366 Sobic008G055432--Sobic007G071950 Sobic008G055432--Sobic005G141801 Sobic001G272532 Sobic001G272532 Sobic008G055432--Sobic001G272532 Sobic005G055150 Sobic005G055150 Sobic008G055432--Sobic005G055150 Sobic010G225226 Sobic010G225226 Sobic008G055432--Sobic010G225226 Sobic008G055432--Sobic006G009400 Sobic010G057700 Sobic010G057700 Sobic008G055432--Sobic010G057700 Sobic005G221425 Sobic005G221425 Sobic008G055432--Sobic005G221425 Sobic001G094000 Sobic001G094000 Sobic009G040700--Sobic001G094000 Sobic003G187400 Sobic003G187400 Sobic009G040700--Sobic003G187400 Sobic005G149500 Sobic005G149500 Sobic009G040700--Sobic005G149500 Sobic007G011400 Sobic007G011400 Sobic009G040700--Sobic007G011400 Sobic002G157300 Sobic002G157300 Sobic009G040700--Sobic002G157300 Sobic001G477800 Sobic001G477800 Sobic009G040700--Sobic001G477800 Sobic006G145000 Sobic006G145000 Sobic009G040700--Sobic006G145000 Sobic004G196700 Sobic004G196700 Sobic009G040700--Sobic004G196700 Sobic008G078100 Sobic008G078100 Sobic009G040700--Sobic008G078100 Sobic002G158700 Sobic002G158700 Sobic001G464200--Sobic002G158700 Sobic001G544200 Sobic001G544200 Sobic001G464200--Sobic001G544200 Sobic004G031700 Sobic004G031700 Sobic001G464200--Sobic004G031700 Sobic001G464200--Sobic001G477800 Sobic006G128900 Sobic006G128900 Sobic001G464200--Sobic006G128900 Sobic002G144966 Sobic002G144966 Sobic001G464200--Sobic002G144966 Sobic001G511500 Sobic001G511500 Sobic001G464200--Sobic001G511500 Sobic001G464200--Sobic010G263800 Sobic003G445400 Sobic003G445400 Sobic001G464200--Sobic003G445400 Sobic006G009400--Sobic010G263800 Sobic006G009400--Sobic005G055150 Sobic002G313300 Sobic002G313300 Sobic006G009400--Sobic002G313300 Sobic001G543900 Sobic001G543900 Sobic006G009400--Sobic001G543900 Sobic005G110427 Sobic005G110427 Sobic006G009400--Sobic005G110427 Sobic006G009400--Sobic001G477800 Sobic007G073400 Sobic007G073400 Sobic006G009400--Sobic007G073400 Sobic007G178700 Sobic007G178700 Sobic006G009400--Sobic007G178700 Sobic006G262200 Sobic006G262200 Sobic006G009400--Sobic006G262200 Sobic010G263800--Sobic006G009400 Sobic010G263800--Sobic007G011400 Sobic002G077200 Sobic002G077200 Sobic010G263800--Sobic002G077200 Sobic010G263800--Sobic002G313300 Sobic010G263800--Sobic002G157300 Sobic010G263800--Sobic007G205800 Sobic010G263800--Sobic009G117400 Sobic010G263800--Sobic001G347600 Sobic010G263800--Sobic008G034600 Sobic005G141801--Sobic005G055150 Sobic005G141801--Sobic006G009400 Sobic010G074500 Sobic010G074500 Sobic005G141801--Sobic010G074500 Sobic001G111900 Sobic001G111900 Sobic005G141801--Sobic001G111900 Sobic005G141801--Sobic010G263800 Sobic005G141801--Sobic006G262200 Sobic005G141801--Sobic005G110427 Sobic002G051450 Sobic002G051450 Sobic005G141801--Sobic002G051450 Sobic005G141801--Sobic009G117400 Sobic004G256600--Sobic003G258400 Sobic004G256600--Sobic004G271900 Sobic004G256600--Sobic010G263800 Sobic004G256600--Sobic009G040700 Sobic005G187200 Sobic005G187200 Sobic004G256600--Sobic005G187200 Sobic004G256600--Sobic006G009400 Sobic009G231300 Sobic009G231300 Sobic004G256600--Sobic009G231300 Sobic004G256600--Sobic009G117400 Sobic004G256600--Sobic002G077200
Octagon: transcription factors


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