Gene annotation
Transcriptome id Sobic.007G072000.1
Synonym Sb07g005720
Functional annotation disease resistance protein RGA3, putative, expressed
UniProt C5YIG0
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF557
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14470 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os11g10770.1 : disease resistance protein RGA3, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS7D02G065200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G071950 - -
2 Sobic.009G040700 "OsPPKL2(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659919)@serine/threonine protein phosphatase, putative, expressed K01090: protein phosphatase
3 Sobic.005G013000 OsFBX181 - F-box domain containing protein, expressed -
4 Sobic.008G055432 - -
5 Sobic.001G454401 - -
6 Sobic.003G056100 transcription initiation factor, putative, expressed K03129: transcription initiation factor TFIID subunit 4
7 Sobic.001G464200 flap endonuclease, putative, expressed K10846: ERCC5, XPG, DNA excision repair protein ERCC-5
8 Sobic.003G258400 splicing factor-related, putative, expressed -
9 Sobic.009G117400 protein kinase domain containing protein, expressed -
10 Sobic.003G113200 5-nucleotidase domain-containing protein, putative, expressed -
11 Sobic.007G031800 expressed protein -
12 Sobic.004G256600 KH domain containing protein, putative, expressed K14945: protein quaking
13 Sobic.005G019600 rp3 protein, putative, expressed -
14 Sobic.003G258900 ZOS3-17 - C2H2 zinc finger protein, expressed K12827: SF3A3, SAP61, splicing factor 3A subunit 3
15 Sobic.006G145000 disease resistance RPP13-like protein 1, putative, expressed -
16 Sobic.001G028900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
17 Sobic.001G111900 - -
18 Sobic.006G237400 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
19 Sobic.002G158700 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6
20 Sobic.010G026400 BUD13, putative, expressed K13106: BUD13, pre-mRNA-splicing factor CWC26


Gene co-expression network
sample Sobic007G072000 Sobic007G072000 Sobic007G071950 Sobic007G071950 Sobic007G072000--Sobic007G071950 Sobic009G040700 Sobic009G040700 Sobic007G072000--Sobic009G040700 Sobic005G013000 Sobic005G013000 Sobic007G072000--Sobic005G013000 Sobic008G055432 Sobic008G055432 Sobic007G072000--Sobic008G055432 Sobic001G454401 Sobic001G454401 Sobic007G072000--Sobic001G454401 Sobic003G056100 Sobic003G056100 Sobic007G072000--Sobic003G056100 Sobic001G464200 Sobic001G464200 Sobic007G072000--Sobic001G464200 Sobic003G258400 Sobic003G258400 Sobic007G072000--Sobic003G258400 Sobic009G117400 Sobic009G117400 Sobic007G072000--Sobic009G117400 Sobic007G071950--Sobic007G072000 Sobic007G071950--Sobic009G117400 Sobic007G071950--Sobic008G055432 Sobic007G071950--Sobic009G040700 Sobic007G071950--Sobic001G464200 Sobic006G009400 Sobic006G009400 Sobic007G071950--Sobic006G009400 Sobic010G263800 Sobic010G263800 Sobic007G071950--Sobic010G263800 Sobic005G141801 Sobic005G141801 Sobic007G071950--Sobic005G141801 Sobic004G256600 Sobic004G256600 Sobic007G071950--Sobic004G256600 Sobic001G094000 Sobic001G094000 Sobic009G040700--Sobic001G094000 Sobic003G187400 Sobic003G187400 Sobic009G040700--Sobic003G187400 Sobic005G149500 Sobic005G149500 Sobic009G040700--Sobic005G149500 Sobic007G011400 Sobic007G011400 Sobic009G040700--Sobic007G011400 Sobic002G157300 Sobic002G157300 Sobic009G040700--Sobic002G157300 Sobic001G477800 Sobic001G477800 Sobic009G040700--Sobic001G477800 Sobic006G145000 Sobic006G145000 Sobic009G040700--Sobic006G145000 Sobic004G196700 Sobic004G196700 Sobic009G040700--Sobic004G196700 Sobic008G078100 Sobic008G078100 Sobic009G040700--Sobic008G078100 Sobic002G158700 Sobic002G158700 Sobic005G013000--Sobic002G158700 Sobic006G128900 Sobic006G128900 Sobic005G013000--Sobic006G128900 Sobic008G024600 Sobic008G024600 Sobic005G013000--Sobic008G024600 Sobic005G013000--Sobic009G040700 Sobic001G544200 Sobic001G544200 Sobic005G013000--Sobic001G544200 Sobic005G013000--Sobic001G464200 Sobic001G111900 Sobic001G111900 Sobic005G013000--Sobic001G111900 Sobic005G013000--Sobic008G078100 Sobic003G445400 Sobic003G445400 Sobic005G013000--Sobic003G445400 Sobic008G055366 Sobic008G055366 Sobic008G055432--Sobic008G055366 Sobic008G055432--Sobic007G071950 Sobic008G055432--Sobic005G141801 Sobic001G272532 Sobic001G272532 Sobic008G055432--Sobic001G272532 Sobic005G055150 Sobic005G055150 Sobic008G055432--Sobic005G055150 Sobic010G225226 Sobic010G225226 Sobic008G055432--Sobic010G225226 Sobic008G055432--Sobic006G009400 Sobic010G057700 Sobic010G057700 Sobic008G055432--Sobic010G057700 Sobic005G221425 Sobic005G221425 Sobic008G055432--Sobic005G221425 Sobic001G454401--Sobic001G111900 Sobic001G454401--Sobic006G009400 Sobic006G262200 Sobic006G262200 Sobic001G454401--Sobic006G262200 Sobic009G127900 Sobic009G127900 Sobic001G454401--Sobic009G127900 Sobic005G110427 Sobic005G110427 Sobic001G454401--Sobic005G110427 Sobic001G454401--Sobic005G055150 Sobic001G454401--Sobic006G145000 Sobic002G144966 Sobic002G144966 Sobic001G454401--Sobic002G144966 Sobic001G454401--Sobic005G141801 Sobic001G125200 Sobic001G125200 Sobic003G056100--Sobic001G125200 Sobic002G006900 Sobic002G006900 Sobic003G056100--Sobic002G006900 Sobic008G067600 Sobic008G067600 Sobic003G056100--Sobic008G067600 Sobic001G512700 Sobic001G512700 Sobic003G056100--Sobic001G512700 Sobic001G497300 Sobic001G497300 Sobic003G056100--Sobic001G497300 Sobic002G315200 Sobic002G315200 Sobic003G056100--Sobic002G315200 Sobic009G104201 Sobic009G104201 Sobic003G056100--Sobic009G104201 Sobic003G087400 Sobic003G087400 Sobic003G056100--Sobic003G087400 Sobic007G217000 Sobic007G217000 Sobic003G056100--Sobic007G217000 Sobic001G464200--Sobic002G158700 Sobic001G464200--Sobic001G544200 Sobic004G031700 Sobic004G031700 Sobic001G464200--Sobic004G031700 Sobic001G464200--Sobic001G477800 Sobic001G464200--Sobic006G128900 Sobic001G464200--Sobic002G144966 Sobic001G511500 Sobic001G511500 Sobic001G464200--Sobic001G511500 Sobic001G464200--Sobic010G263800 Sobic001G464200--Sobic003G445400 Sobic002G077200 Sobic002G077200 Sobic003G258400--Sobic002G077200 Sobic003G258400--Sobic004G256600 Sobic009G087800 Sobic009G087800 Sobic003G258400--Sobic009G087800 Sobic009G231300 Sobic009G231300 Sobic003G258400--Sobic009G231300 Sobic009G180200 Sobic009G180200 Sobic003G258400--Sobic009G180200 Sobic004G271900 Sobic004G271900 Sobic003G258400--Sobic004G271900 Sobic007G205800 Sobic007G205800 Sobic003G258400--Sobic007G205800 Sobic003G093600 Sobic003G093600 Sobic003G258400--Sobic003G093600 Sobic009G110366 Sobic009G110366 Sobic003G258400--Sobic009G110366 Sobic009G117300 Sobic009G117300 Sobic009G117400--Sobic009G117300 Sobic009G117400--Sobic004G271900 Sobic009G117400--Sobic010G263800 Sobic009G117400--Sobic007G205800 Sobic009G117400--Sobic004G256600 Sobic008G034600 Sobic008G034600 Sobic009G117400--Sobic008G034600 Sobic001G347600 Sobic001G347600 Sobic009G117400--Sobic001G347600 Sobic004G057400 Sobic004G057400 Sobic009G117400--Sobic004G057400 Sobic006G209500 Sobic006G209500 Sobic009G117400--Sobic006G209500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.