Gene annotation
Transcriptome id Sobic.002G323600.1
Synonym Sb02g035110
Functional annotation lipase class 3 family protein, putative, expressed
UniProt C5XA54
Pfam -
Panther DB PTHR31479 PTHR31479:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G24230 : Lipase class 3-related protein
RAP-DB (Rice) LOC_Os07g34440.1 : lipase class 3 family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU4Hr1G080430.1
Wheat TraesCS4D02G332200 , TraesCS4B02G336500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G089900 4-Coumarate-CoA ligase(PubMedID : 22313236)@AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
2 Sobic.001G482000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed K00485: dimethylaniline monooxygenase (N-oxide forming)
3 Sobic.001G442500 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
4 Sobic.004G231700 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.009G076300 expressed protein -
6 Sobic.006G031200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DSBA-like thioredoxin domain containing protein, expressed -
7 Sobic.002G173500 cytokinin-O-glucosyltransferase 1, putative, expressed -
8 Sobic.010G117500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
9 Sobic.008G099300 cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed -
10 Sobic.001G131100 expressed protein -
11 Sobic.010G018600 retinol dehydrogenase, putative, expressed -
12 Sobic.003G357700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Laccase LAC7 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
13 Sobic.002G366200 NAD dependent epimerase/dehydratase family protein, putative, expressed -
14 Sobic.002G028632 - -
15 Sobic.002G030650 - -
16 Sobic.008G010500 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.001G231800 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
18 Sobic.003G280000 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.005G177100 glycosyl hydrolase, putative, expressed -
20 Sobic.005G202200 integral membrane protein, putative, expressed -


Gene co-expression network
sample Sobic002G323600 Sobic002G323600 Sobic007G089900 Sobic007G089900 Sobic002G323600--Sobic007G089900 Sobic001G482000 Sobic001G482000 Sobic002G323600--Sobic001G482000 Sobic001G442500 Sobic001G442500 Sobic002G323600--Sobic001G442500 Sobic004G231700 Sobic004G231700 Sobic002G323600--Sobic004G231700 Sobic009G076300 Sobic009G076300 Sobic002G323600--Sobic009G076300 Sobic006G031200 Sobic006G031200 Sobic002G323600--Sobic006G031200 Sobic002G173500 Sobic002G173500 Sobic002G323600--Sobic002G173500 Sobic010G117500 Sobic010G117500 Sobic002G323600--Sobic010G117500 Sobic008G099300 Sobic008G099300 Sobic002G323600--Sobic008G099300 Sobic007G089900--Sobic008G099300 Sobic010G018600 Sobic010G018600 Sobic007G089900--Sobic010G018600 Sobic007G089900--Sobic002G323600 Sobic001G443100 Sobic001G443100 Sobic007G089900--Sobic001G443100 Sobic005G069000 Sobic005G069000 Sobic007G089900--Sobic005G069000 Sobic007G193200 Sobic007G193200 Sobic007G089900--Sobic007G193200 Sobic007G089900--Sobic001G442500 Sobic005G110541 Sobic005G110541 Sobic007G089900--Sobic005G110541 Sobic009G225800 Sobic009G225800 Sobic007G089900--Sobic009G225800 Sobic007G186500 Sobic007G186500 Sobic001G482000--Sobic007G186500 Sobic005G206000 Sobic005G206000 Sobic001G482000--Sobic005G206000 Sobic010G013000 Sobic010G013000 Sobic001G482000--Sobic010G013000 Sobic010G268700 Sobic010G268700 Sobic001G482000--Sobic010G268700 Sobic008G010500 Sobic008G010500 Sobic001G482000--Sobic008G010500 Sobic001G482000--Sobic009G076300 Sobic001G301000 Sobic001G301000 Sobic001G482000--Sobic001G301000 Sobic001G231800 Sobic001G231800 Sobic001G482000--Sobic001G231800 Sobic002G025500 Sobic002G025500 Sobic001G482000--Sobic002G025500 Sobic001G353200 Sobic001G353200 Sobic001G442500--Sobic001G353200 Sobic009G204900 Sobic009G204900 Sobic001G442500--Sobic009G204900 Sobic006G101900 Sobic006G101900 Sobic001G442500--Sobic006G101900 Sobic001G162200 Sobic001G162200 Sobic001G442500--Sobic001G162200 Sobic001G442500--Sobic007G089900 Sobic003G280000 Sobic003G280000 Sobic001G442500--Sobic003G280000 Sobic001G421000 Sobic001G421000 Sobic001G442500--Sobic001G421000 Sobic005G202300 Sobic005G202300 Sobic001G442500--Sobic005G202300 Sobic010G187500 Sobic010G187500 Sobic001G442500--Sobic010G187500 Sobic001G059600 Sobic001G059600 Sobic004G231700--Sobic001G059600 Sobic003G341500 Sobic003G341500 Sobic004G231700--Sobic003G341500 Sobic003G020200 Sobic003G020200 Sobic004G231700--Sobic003G020200 Sobic002G050300 Sobic002G050300 Sobic004G231700--Sobic002G050300 Sobic003G053600 Sobic003G053600 Sobic004G231700--Sobic003G053600 Sobic010G093300 Sobic010G093300 Sobic004G231700--Sobic010G093300 Sobic003G353200 Sobic003G353200 Sobic004G231700--Sobic003G353200 Sobic004G231700--Sobic003G280000 Sobic009G162300 Sobic009G162300 Sobic004G231700--Sobic009G162300 Sobic004G008300 Sobic004G008300 Sobic009G076300--Sobic004G008300 Sobic003G204300 Sobic003G204300 Sobic009G076300--Sobic003G204300 Sobic003G204400 Sobic003G204400 Sobic009G076300--Sobic003G204400 Sobic009G004950 Sobic009G004950 Sobic009G076300--Sobic009G004950 Sobic007G066508 Sobic007G066508 Sobic009G076300--Sobic007G066508 Sobic005G220300 Sobic005G220300 Sobic009G076300--Sobic005G220300 Sobic002G009100 Sobic002G009100 Sobic009G076300--Sobic002G009100 Sobic008G109200 Sobic008G109200 Sobic006G031200--Sobic008G109200 Sobic002G067300 Sobic002G067300 Sobic006G031200--Sobic002G067300 Sobic006G021900 Sobic006G021900 Sobic006G031200--Sobic006G021900 Sobic005G093400 Sobic005G093400 Sobic006G031200--Sobic005G093400 Sobic003G428900 Sobic003G428900 Sobic006G031200--Sobic003G428900 Sobic001G331000 Sobic001G331000 Sobic006G031200--Sobic001G331000 Sobic006G228200 Sobic006G228200 Sobic006G031200--Sobic006G228200 Sobic006G014000 Sobic006G014000 Sobic006G031200--Sobic006G014000 Sobic004G349300 Sobic004G349300 Sobic006G031200--Sobic004G349300 Sobic002G030650 Sobic002G030650 Sobic002G173500--Sobic002G030650 Sobic002G173500--Sobic010G187500 Sobic002G173500--Sobic005G110541 Sobic008G058400 Sobic008G058400 Sobic002G173500--Sobic008G058400 Sobic001G388000 Sobic001G388000 Sobic002G173500--Sobic001G388000 Sobic003G270400 Sobic003G270400 Sobic002G173500--Sobic003G270400 Sobic002G173500--Sobic005G069000 Sobic003G023600 Sobic003G023600 Sobic002G173500--Sobic003G023600 Sobic009G006300 Sobic009G006300 Sobic002G173500--Sobic009G006300 Sobic010G117500--Sobic003G204400 Sobic010G117500--Sobic004G008300 Sobic004G008900 Sobic004G008900 Sobic010G117500--Sobic004G008900 Sobic010G117500--Sobic003G204300 Sobic010G117500--Sobic009G076300 Sobic010G117800 Sobic010G117800 Sobic010G117500--Sobic010G117800 Sobic005G216200 Sobic005G216200 Sobic010G117500--Sobic005G216200 Sobic006G168100 Sobic006G168100 Sobic010G117500--Sobic006G168100 Sobic003G097400 Sobic003G097400 Sobic010G117500--Sobic003G097400 Sobic008G099232 Sobic008G099232 Sobic008G099300--Sobic008G099232 Sobic005G217766 Sobic005G217766 Sobic008G099300--Sobic005G217766 Sobic002G111900 Sobic002G111900 Sobic008G099300--Sobic002G111900 Sobic008G099300--Sobic009G225800 Sobic010G010000 Sobic010G010000 Sobic008G099300--Sobic010G010000 Sobic007G220400 Sobic007G220400 Sobic008G099300--Sobic007G220400 Sobic009G065700 Sobic009G065700 Sobic008G099300--Sobic009G065700 Sobic001G414800 Sobic001G414800 Sobic008G099300--Sobic001G414800 Sobic004G119800 Sobic004G119800 Sobic008G099300--Sobic004G119800
Octagon: transcription factors


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