Gene annotation
Transcriptome id Sobic.007G125100.1
Synonym Sb07g020180
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
expressed protein
UniProt A0A1Z5R9I3
Pfam PF06880
Panther DB PTHR31050 PTHR31050:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G13520 : Protein of unknown function (DUF1262)
RAP-DB (Rice) LOC_Os08g31850.1 : expressed protein
MaizeGDB (Corn) Zm00025a031025
Brachypodium KQJ98258
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G267100 zinc finger family protein, putative, expressed -
2 Sobic.004G297600 triacylglycerol lipase like protein, putative, expressed -
3 Sobic.001G482600 "TIFY 11b(Ortholog in rice:Hakata et al., 2012)"(PubMedID : 31659847)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
4 Sobic.003G008300 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
5 Sobic.010G163150 - -
6 Sobic.003G253200 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
7 Sobic.003G118900 disease resistance protein RGA2, putative, expressed -
8 Sobic.001G071300 expressed protein -
9 Sobic.007G077300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
10 Sobic.006G257700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heavy metal transport/detoxification protein, putative, expressed -
11 Sobic.004G246300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@membrane attack complex component/perforin/complement C9, putative, expressed -
12 Sobic.001G195100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
13 Sobic.001G213500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.004G140000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@basic helix-loop-helix family protein, putative, expressed -
15 Sobic.001G314800 hydrolase, alpha/beta fold family protein, putative, expressed -
16 Sobic.003G360200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@homeobox domain containing protein, expressed -
17 Sobic.003G310500 DUF567 domain containing protein, putative, expressed -
18 Sobic.007G124400 UNE2, putative, expressed -
19 Sobic.003G125500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@TKL_IRAK_CR4L.2 - The CR4L subfamily has homology with Crinkly4, expressed -
20 Sobic.001G319200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic007G125100 Sobic007G125100 Sobic010G267100 Sobic010G267100 Sobic007G125100--Sobic010G267100 Sobic004G297600 Sobic004G297600 Sobic007G125100--Sobic004G297600 Sobic001G482600 Sobic001G482600 Sobic007G125100--Sobic001G482600 Sobic003G008300 Sobic003G008300 Sobic007G125100--Sobic003G008300 Sobic010G163150 Sobic010G163150 Sobic007G125100--Sobic010G163150 Sobic003G253200 Sobic003G253200 Sobic007G125100--Sobic003G253200 Sobic003G118900 Sobic003G118900 Sobic007G125100--Sobic003G118900 Sobic001G071300 Sobic001G071300 Sobic007G125100--Sobic001G071300 Sobic007G077300 Sobic007G077300 Sobic007G125100--Sobic007G077300 Sobic001G432700 Sobic001G432700 Sobic010G267100--Sobic001G432700 Sobic004G302200 Sobic004G302200 Sobic010G267100--Sobic004G302200 Sobic003G360200 Sobic003G360200 Sobic010G267100--Sobic003G360200 Sobic010G192900 Sobic010G192900 Sobic010G267100--Sobic010G192900 Sobic007G108700 Sobic007G108700 Sobic010G267100--Sobic007G108700 Sobic002G356500 Sobic002G356500 Sobic010G267100--Sobic002G356500 Sobic003G125500 Sobic003G125500 Sobic010G267100--Sobic003G125500 Sobic006G009000 Sobic006G009000 Sobic010G267100--Sobic006G009000 Sobic003G024900 Sobic003G024900 Sobic010G267100--Sobic003G024900 Sobic006G257700 Sobic006G257700 Sobic004G297600--Sobic006G257700 Sobic010G102000 Sobic010G102000 Sobic004G297600--Sobic010G102000 Sobic009G010400 Sobic009G010400 Sobic004G297600--Sobic009G010400 Sobic001G195100 Sobic001G195100 Sobic004G297600--Sobic001G195100 Sobic001G314800 Sobic001G314800 Sobic004G297600--Sobic001G314800 Sobic010G105300 Sobic010G105300 Sobic004G297600--Sobic010G105300 Sobic001G489500 Sobic001G489500 Sobic004G297600--Sobic001G489500 Sobic002G341900 Sobic002G341900 Sobic004G297600--Sobic002G341900 Sobic001G064900 Sobic001G064900 Sobic004G297600--Sobic001G064900 Sobic001G482600--Sobic007G077300 Sobic001G482600--Sobic006G257700 Sobic001G482600--Sobic010G102000 Sobic010G209100 Sobic010G209100 Sobic001G482600--Sobic010G209100 Sobic007G077200 Sobic007G077200 Sobic001G482600--Sobic007G077200 Sobic009G217500 Sobic009G217500 Sobic001G482600--Sobic009G217500 Sobic006G273800 Sobic006G273800 Sobic001G482600--Sobic006G273800 Sobic001G406300 Sobic001G406300 Sobic001G482600--Sobic001G406300 Sobic007G077100 Sobic007G077100 Sobic001G482600--Sobic007G077100 Sobic001G513100 Sobic001G513100 Sobic003G008300--Sobic001G513100 Sobic002G058600 Sobic002G058600 Sobic003G008300--Sobic002G058600 Sobic002G366700 Sobic002G366700 Sobic003G008300--Sobic002G366700 Sobic003G008300--Sobic003G118900 Sobic002G349300 Sobic002G349300 Sobic003G008300--Sobic002G349300 Sobic002G046700 Sobic002G046700 Sobic003G008300--Sobic002G046700 Sobic002G339400 Sobic002G339400 Sobic003G008300--Sobic002G339400 Sobic010G099600 Sobic010G099600 Sobic003G008300--Sobic010G099600 Sobic007G038900 Sobic007G038900 Sobic003G008300--Sobic007G038900 Sobic001G146400 Sobic001G146400 Sobic010G163150--Sobic001G146400 Sobic002G386200 Sobic002G386200 Sobic010G163150--Sobic002G386200 Sobic010G018300 Sobic010G018300 Sobic010G163150--Sobic010G018300 Sobic009G067400 Sobic009G067400 Sobic010G163150--Sobic009G067400 Sobic010G163150--Sobic004G297600 Sobic009G214300 Sobic009G214300 Sobic010G163150--Sobic009G214300 Sobic010G210600 Sobic010G210600 Sobic010G163150--Sobic010G210600 Sobic004G181300 Sobic004G181300 Sobic010G163150--Sobic004G181300 Sobic003G258700 Sobic003G258700 Sobic010G163150--Sobic003G258700 Sobic001G319200 Sobic001G319200 Sobic003G253200--Sobic001G319200 Sobic002G214500 Sobic002G214500 Sobic003G253200--Sobic002G214500 Sobic006G274500 Sobic006G274500 Sobic003G253200--Sobic006G274500 Sobic010G275001 Sobic010G275001 Sobic003G253200--Sobic010G275001 Sobic001G331000 Sobic001G331000 Sobic003G253200--Sobic001G331000 Sobic004G333300 Sobic004G333300 Sobic003G253200--Sobic004G333300 Sobic001G156600 Sobic001G156600 Sobic003G253200--Sobic001G156600 Sobic003G253200--Sobic003G125500 Sobic009G115600 Sobic009G115600 Sobic003G253200--Sobic009G115600 Sobic003G118900--Sobic003G008300 Sobic007G131800 Sobic007G131800 Sobic003G118900--Sobic007G131800 Sobic003G118900--Sobic001G513100 Sobic006G166700 Sobic006G166700 Sobic003G118900--Sobic006G166700 Sobic010G087200 Sobic010G087200 Sobic003G118900--Sobic010G087200 Sobic001G020500 Sobic001G020500 Sobic003G118900--Sobic001G020500 Sobic002G001300 Sobic002G001300 Sobic003G118900--Sobic002G001300 Sobic003G118900--Sobic002G366700 Sobic003G118900--Sobic002G339400 Sobic005G165900 Sobic005G165900 Sobic001G071300--Sobic005G165900 Sobic004G220600 Sobic004G220600 Sobic001G071300--Sobic004G220600 Sobic004G169900 Sobic004G169900 Sobic001G071300--Sobic004G169900 Sobic001G071300--Sobic003G258700 Sobic002G216500 Sobic002G216500 Sobic001G071300--Sobic002G216500 Sobic001G071300--Sobic009G214300 Sobic003G138400 Sobic003G138400 Sobic001G071300--Sobic003G138400 Sobic003G376200 Sobic003G376200 Sobic001G071300--Sobic003G376200 Sobic001G071300--Sobic009G010400 Sobic007G077300--Sobic001G482600 Sobic007G077300--Sobic006G257700 Sobic007G077300--Sobic001G064900 Sobic007G077300--Sobic001G406300 Sobic007G077300--Sobic004G297600 Sobic007G077300--Sobic010G163150 Sobic007G077300--Sobic006G273800 Sobic001G095700 Sobic001G095700 Sobic007G077300--Sobic001G095700 Sobic007G077300--Sobic010G102000
Octagon: transcription factors


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