Gene annotation
Transcriptome id Sobic.001G482600.1
Synonym JAZ2, TIFY10B
Functional annotation "TIFY 11b(Ortholog in rice:Hakata et al., 2012)" (PubMedID : 31659847)
ZIM domain containing protein, putative, expressed
UniProt A0A1B6QQ60
Pfam PF09425 PF06200
Panther DB PTHR33077 PTHR33077:SF4
NCBI CDD -
KEGG Orthology K13464; jasmonate ZIM domain-containing protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G19180 : jasmonate-zim-domain protein 1
RAP-DB (Rice) LOC_Os03g08330.1 : ZIM domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a053283 , Zm00025a000928
Brachypodium KQK23309
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G482600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G077300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
2 Sobic.006G257700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heavy metal transport/detoxification protein, putative, expressed -
3 Sobic.010G102000 U-box protein CMPG1, putative, expressed -
4 Sobic.010G209100 WRKY28, expressed -
5 Sobic.007G077200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
6 Sobic.009G217500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.18 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
7 Sobic.006G273800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
8 Sobic.001G406300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
9 Sobic.007G077100 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
10 Sobic.007G077001 - -
11 Sobic.003G234000 DUF1645 domain containing protein, putative, expressed -
12 Sobic.010G083600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1645 domain containing protein, putative, expressed -
13 Sobic.004G305000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
14 Sobic.001G095700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
15 Sobic.007G051800 down-regulated TF in developmental senescence(PubMedID : 27586543)@basic helix-loop-helix family protein, putative, expressed -
16 Sobic.003G353800 avr9/Cf-9 rapidly elicited protein, putative, expressed -
17 Sobic.010G023200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.004G297600 triacylglycerol lipase like protein, putative, expressed -
19 Sobic.001G064900 syntaxin, putative, expressed K08486: syntaxin 1B/2/3
20 Sobic.003G341100 WRKY24, expressed K13424: WRKY transcription factor 33


Gene co-expression network
sample Sobic001G482600 Sobic001G482600 Sobic007G077300 Sobic007G077300 Sobic001G482600--Sobic007G077300 Sobic006G257700 Sobic006G257700 Sobic001G482600--Sobic006G257700 Sobic010G102000 Sobic010G102000 Sobic001G482600--Sobic010G102000 Sobic010G209100 Sobic010G209100 Sobic001G482600--Sobic010G209100 Sobic007G077200 Sobic007G077200 Sobic001G482600--Sobic007G077200 Sobic009G217500 Sobic009G217500 Sobic001G482600--Sobic009G217500 Sobic006G273800 Sobic006G273800 Sobic001G482600--Sobic006G273800 Sobic001G406300 Sobic001G406300 Sobic001G482600--Sobic001G406300 Sobic007G077100 Sobic007G077100 Sobic001G482600--Sobic007G077100 Sobic007G077300--Sobic001G482600 Sobic007G077300--Sobic006G257700 Sobic001G064900 Sobic001G064900 Sobic007G077300--Sobic001G064900 Sobic007G077300--Sobic001G406300 Sobic004G297600 Sobic004G297600 Sobic007G077300--Sobic004G297600 Sobic010G163150 Sobic010G163150 Sobic007G077300--Sobic010G163150 Sobic007G077300--Sobic006G273800 Sobic001G095700 Sobic001G095700 Sobic007G077300--Sobic001G095700 Sobic007G077300--Sobic010G102000 Sobic006G257700--Sobic001G064900 Sobic009G010400 Sobic009G010400 Sobic006G257700--Sobic009G010400 Sobic006G257700--Sobic010G102000 Sobic006G257700--Sobic004G297600 Sobic006G257700--Sobic001G095700 Sobic001G287600 Sobic001G287600 Sobic006G257700--Sobic001G287600 Sobic010G023200 Sobic010G023200 Sobic006G257700--Sobic010G023200 Sobic006G257700--Sobic007G077300 Sobic006G259000 Sobic006G259000 Sobic006G257700--Sobic006G259000 Sobic010G102000--Sobic009G217500 Sobic010G105300 Sobic010G105300 Sobic010G102000--Sobic010G105300 Sobic003G341100 Sobic003G341100 Sobic010G102000--Sobic003G341100 Sobic002G232800 Sobic002G232800 Sobic010G102000--Sobic002G232800 Sobic010G102000--Sobic001G064900 Sobic007G145700 Sobic007G145700 Sobic010G102000--Sobic007G145700 Sobic010G102000--Sobic010G023200 Sobic010G102000--Sobic007G077100 Sobic010G102000--Sobic006G273800 Sobic001G259600 Sobic001G259600 Sobic010G209100--Sobic001G259600 Sobic001G341600 Sobic001G341600 Sobic010G209100--Sobic001G341600 Sobic001G077400 Sobic001G077400 Sobic010G209100--Sobic001G077400 Sobic010G209100--Sobic007G077200 Sobic002G036100 Sobic002G036100 Sobic010G209100--Sobic002G036100 Sobic004G280900 Sobic004G280900 Sobic010G209100--Sobic004G280900 Sobic005G109000 Sobic005G109000 Sobic010G209100--Sobic005G109000 Sobic002G140300 Sobic002G140300 Sobic010G209100--Sobic002G140300 Sobic010G209100--Sobic009G217500 Sobic007G077200--Sobic001G259600 Sobic007G077200--Sobic007G077100 Sobic007G077200--Sobic010G209100 Sobic007G077200--Sobic010G023200 Sobic007G077200--Sobic009G217500 Sobic003G324400 Sobic003G324400 Sobic007G077200--Sobic003G324400 Sobic001G035000 Sobic001G035000 Sobic007G077200--Sobic001G035000 Sobic001G040200 Sobic001G040200 Sobic007G077200--Sobic001G040200 Sobic006G263600 Sobic006G263600 Sobic007G077200--Sobic006G263600 Sobic009G217500--Sobic006G273800 Sobic009G217500--Sobic007G077100 Sobic009G217500--Sobic003G341100 Sobic009G217500--Sobic010G023200 Sobic009G217500--Sobic010G102000 Sobic003G416500 Sobic003G416500 Sobic009G217500--Sobic003G416500 Sobic009G217500--Sobic001G341600 Sobic009G217500--Sobic001G035000 Sobic009G217500--Sobic001G064900 Sobic006G273800--Sobic009G217500 Sobic006G273800--Sobic010G023200 Sobic006G273800--Sobic007G077100 Sobic006G273800--Sobic003G341100 Sobic001G370600 Sobic001G370600 Sobic006G273800--Sobic001G370600 Sobic006G273800--Sobic003G416500 Sobic006G273800--Sobic001G064900 Sobic006G273800--Sobic001G035000 Sobic010G234000 Sobic010G234000 Sobic006G273800--Sobic010G234000 Sobic010G023300 Sobic010G023300 Sobic001G406300--Sobic010G023300 Sobic002G294600 Sobic002G294600 Sobic001G406300--Sobic002G294600 Sobic004G065900 Sobic004G065900 Sobic001G406300--Sobic004G065900 Sobic002G185200 Sobic002G185200 Sobic001G406300--Sobic002G185200 Sobic007G051800 Sobic007G051800 Sobic001G406300--Sobic007G051800 Sobic001G406300--Sobic001G095700 Sobic009G157100 Sobic009G157100 Sobic001G406300--Sobic009G157100 Sobic007G143400 Sobic007G143400 Sobic001G406300--Sobic007G143400 Sobic006G210300 Sobic006G210300 Sobic001G406300--Sobic006G210300 Sobic007G077100--Sobic010G023200 Sobic007G077100--Sobic009G217500 Sobic007G077100--Sobic006G273800 Sobic007G077100--Sobic003G416500 Sobic007G077100--Sobic003G341100 Sobic007G077100--Sobic006G259000 Sobic007G077100--Sobic007G077200 Sobic010G071000 Sobic010G071000 Sobic007G077100--Sobic010G071000 Sobic001G489500 Sobic001G489500 Sobic007G077100--Sobic001G489500
Octagon: transcription factors


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