Gene annotation
Transcriptome id Sobic.010G219800.1
Synonym 3, VSR6, VSR3, BP80-3, Sb10g026544
Functional annotation vacuolar-sorting receptor precursor, putative, expressed
UniProt A0A194YLT5
Pfam PF02225
Panther DB PTHR22765 PTHR22765:SF56
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G30900 : VACUOLAR SORTING RECEPTOR 6
RAP-DB (Rice) LOC_Os06g45380.1 : vacuolar-sorting receptor precursor, putative, expressed
MaizeGDB (Corn) Zm00025a051737
Brachypodium KQK16993
Barley HORVU2Hr1G017770.2 , HORVU2Hr1G017770.3 , HORVU2Hr1G017770.1 , HORVU2Hr1G017770.4 , HORVU2Hr1G017770.5 , HORVU2Hr1G017770.8 , HORVU2Hr1G017770.9 , HORVU7Hr1G109180.1 , HORVU7Hr1G109180.2 , HORVU7Hr1G109180.3 , HORVU7Hr1G109180.4 , HORVU2Hr1G017770.11 , HORVU2Hr1G017770.14 , HORVU2Hr1G017770.15 , HORVU2Hr1G017770.16 , HORVU2Hr1G017770.17 , HORVU2Hr1G017770.18 , HORVU2Hr1G017770.19
Wheat TraesCS2D02G105100 , TraesCS2D02G423700 , TraesCS7D02G471300 , TraesCS7D02G145700 , TraesCS7D02G145700 , TraesCS7D02G145700 , TraesCS7D02G145700 , TraesCS7B02G387100 , TraesCS2B02G122400 , TraesCS2A02G105500 , TraesCS7A02G483700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.K010100 expressed protein -
2 Sobic.005G161900 cytochrome P450, putative, expressed K05917: sterol 14alpha-demethylase
3 Sobic.010G035900 expressed protein -
4 Sobic.004G106500 hydroquinone glucosyltransferase, putative, expressed -
5 Sobic.009G162700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@exostosin family domain containing protein, expressed -
6 Sobic.007G148300 ferric reductase, putative, expressed K13447: respiratory burst oxidase
7 Sobic.005G110508 - -
8 Sobic.005G091900 serpin domain containing protein, putative, expressed K13963: serpin B
9 Sobic.006G246500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
10 Sobic.010G022400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
11 Sobic.002G081850 - -
12 Sobic.009G027800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase C, putative, expressed K05857: phosphatidylinositol phospholipase C, delta
13 Sobic.004G187600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
14 Sobic.002G235800 expressed protein -
15 Sobic.006G108300 expressed protein -
16 Sobic.009G015166 - -
17 Sobic.002G081800 RGH1A, putative, expressed -
18 Sobic.001G506700 exostosin family domain containing protein, expressed -
19 Sobic.001G132800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAMK_CAMK_like.21 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
20 Sobic.004G312500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@nitrate reductase, putative, expressed K10534: nitrate reductase (NAD(P)H)


Gene co-expression network
sample Sobic010G219800 Sobic010G219800 SobicK010100 SobicK010100 Sobic010G219800--SobicK010100 Sobic005G161900 Sobic005G161900 Sobic010G219800--Sobic005G161900 Sobic010G035900 Sobic010G035900 Sobic010G219800--Sobic010G035900 Sobic004G106500 Sobic004G106500 Sobic010G219800--Sobic004G106500 Sobic009G162700 Sobic009G162700 Sobic010G219800--Sobic009G162700 Sobic007G148300 Sobic007G148300 Sobic010G219800--Sobic007G148300 Sobic005G110508 Sobic005G110508 Sobic010G219800--Sobic005G110508 Sobic005G091900 Sobic005G091900 Sobic010G219800--Sobic005G091900 Sobic006G246500 Sobic006G246500 Sobic010G219800--Sobic006G246500 Sobic003G080600 Sobic003G080600 SobicK010100--Sobic003G080600 Sobic002G165020 Sobic002G165020 SobicK010100--Sobic002G165020 SobicK010100--Sobic010G219800 Sobic002G235800 Sobic002G235800 SobicK010100--Sobic002G235800 SobicK010100--Sobic005G161900 SobicK010100--Sobic004G106500 Sobic002G424500 Sobic002G424500 SobicK010100--Sobic002G424500 Sobic002G325500 Sobic002G325500 SobicK010100--Sobic002G325500 SobicK010100--Sobic006G246500 Sobic004G156250 Sobic004G156250 Sobic005G161900--Sobic004G156250 Sobic004G034200 Sobic004G034200 Sobic005G161900--Sobic004G034200 Sobic004G108800 Sobic004G108800 Sobic005G161900--Sobic004G108800 Sobic005G161900--SobicK010100 Sobic001G131001 Sobic001G131001 Sobic005G161900--Sobic001G131001 Sobic001G238500 Sobic001G238500 Sobic005G161900--Sobic001G238500 Sobic004G126500 Sobic004G126500 Sobic005G161900--Sobic004G126500 Sobic005G104200 Sobic005G104200 Sobic005G161900--Sobic005G104200 Sobic003G141200 Sobic003G141200 Sobic005G161900--Sobic003G141200 Sobic005G092000 Sobic005G092000 Sobic010G035900--Sobic005G092000 Sobic001G396400 Sobic001G396400 Sobic010G035900--Sobic001G396400 Sobic001G132800 Sobic001G132800 Sobic010G035900--Sobic001G132800 Sobic008G087400 Sobic008G087400 Sobic010G035900--Sobic008G087400 Sobic009G027800 Sobic009G027800 Sobic010G035900--Sobic009G027800 Sobic005G110490 Sobic005G110490 Sobic010G035900--Sobic005G110490 Sobic007G172500 Sobic007G172500 Sobic010G035900--Sobic007G172500 Sobic002G167000 Sobic002G167000 Sobic010G035900--Sobic002G167000 Sobic004G172100 Sobic004G172100 Sobic010G035900--Sobic004G172100 Sobic008G019900 Sobic008G019900 Sobic004G106500--Sobic008G019900 Sobic004G187600 Sobic004G187600 Sobic004G106500--Sobic004G187600 Sobic008G078800 Sobic008G078800 Sobic004G106500--Sobic008G078800 Sobic004G106500--Sobic002G325500 Sobic004G037100 Sobic004G037100 Sobic004G106500--Sobic004G037100 Sobic004G046400 Sobic004G046400 Sobic004G106500--Sobic004G046400 Sobic004G106500--Sobic002G165020 Sobic006G266800 Sobic006G266800 Sobic004G106500--Sobic006G266800 Sobic007G005100 Sobic007G005100 Sobic004G106500--Sobic007G005100 Sobic003G387500 Sobic003G387500 Sobic009G162700--Sobic003G387500 Sobic006G144600 Sobic006G144600 Sobic009G162700--Sobic006G144600 Sobic001G406700 Sobic001G406700 Sobic009G162700--Sobic001G406700 Sobic010G232500 Sobic010G232500 Sobic009G162700--Sobic010G232500 Sobic002G167600 Sobic002G167600 Sobic009G162700--Sobic002G167600 Sobic002G205500 Sobic002G205500 Sobic009G162700--Sobic002G205500 Sobic001G224300 Sobic001G224300 Sobic009G162700--Sobic001G224300 Sobic008G137000 Sobic008G137000 Sobic009G162700--Sobic008G137000 Sobic002G352000 Sobic002G352000 Sobic009G162700--Sobic002G352000 Sobic007G148300--Sobic005G110508 Sobic001G526500 Sobic001G526500 Sobic007G148300--Sobic001G526500 Sobic005G079400 Sobic005G079400 Sobic007G148300--Sobic005G079400 Sobic003G052100 Sobic003G052100 Sobic007G148300--Sobic003G052100 Sobic001G402400 Sobic001G402400 Sobic007G148300--Sobic001G402400 Sobic008G014700 Sobic008G014700 Sobic007G148300--Sobic008G014700 Sobic005G066300 Sobic005G066300 Sobic007G148300--Sobic005G066300 Sobic004G312500 Sobic004G312500 Sobic007G148300--Sobic004G312500 Sobic009G015166 Sobic009G015166 Sobic007G148300--Sobic009G015166 Sobic005G110511 Sobic005G110511 Sobic005G110508--Sobic005G110511 Sobic005G066500 Sobic005G066500 Sobic005G110508--Sobic005G066500 Sobic005G110508--Sobic004G312500 Sobic005G110508--Sobic005G066300 Sobic005G066366 Sobic005G066366 Sobic005G110508--Sobic005G066366 Sobic005G071900 Sobic005G071900 Sobic005G110508--Sobic005G071900 Sobic002G411000 Sobic002G411000 Sobic005G110508--Sobic002G411000 Sobic005G197350 Sobic005G197350 Sobic005G110508--Sobic005G197350 Sobic005G110508--Sobic005G079400 Sobic005G115300 Sobic005G115300 Sobic005G091900--Sobic005G115300 Sobic005G175900 Sobic005G175900 Sobic005G091900--Sobic005G175900 Sobic001G506700 Sobic001G506700 Sobic005G091900--Sobic001G506700 Sobic001G503000 Sobic001G503000 Sobic005G091900--Sobic001G503000 Sobic008G084900 Sobic008G084900 Sobic005G091900--Sobic008G084900 Sobic001G149400 Sobic001G149400 Sobic005G091900--Sobic001G149400 Sobic005G018200 Sobic005G018200 Sobic005G091900--Sobic005G018200 Sobic002G019100 Sobic002G019100 Sobic005G091900--Sobic002G019100 Sobic005G091900--Sobic006G266800 Sobic007G061600 Sobic007G061600 Sobic006G246500--Sobic007G061600 Sobic006G246500--SobicK010100 Sobic006G246500--Sobic002G325500 Sobic005G048400 Sobic005G048400 Sobic006G246500--Sobic005G048400 Sobic002G199200 Sobic002G199200 Sobic006G246500--Sobic002G199200 Sobic006G246500--Sobic003G141200 Sobic006G246500--Sobic010G219800 Sobic003G094700 Sobic003G094700 Sobic006G246500--Sobic003G094700 Sobic001G326400 Sobic001G326400 Sobic006G246500--Sobic001G326400
Octagon: transcription factors


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