Gene annotation
Transcriptome id Sobic.002G424500.5,Sobic.002G424500.3,Sobic.002G424500.2,Sobic.002G424500.4,Sobic.002G424500.1,Sobic.002G424500.6
Synonym CIPK3, Sb02g043520, SbCIPK28, CBL-interacting protein kinases, SnRK3.17
Functional annotation Interacting factor of CBLs (PubMedID : 19860013)
CAMK_KIN1/SNF1/Nim1_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C4P7S8 , A0A1W0W7Z9 , A0A1B6QGE9
Pfam PF03822 PF00069
Panther DB PTHR24343 PTHR24343:SF185
NCBI CDD KOG0583; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0007165; signal transduction GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G26980 : Ca2+regulated serine-threonine protein kinase family protein,CBL-interacting protein kinase 3
RAP-DB (Rice) LOC_Os03g20380.1 : CAMK_KIN1/SNF1/Nim1_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a049219 , Zm00025a015010
Brachypodium -
Barley -
Wheat TraesCS4A02G126800 , TraesCS4A02G126800 , TraesCS4A02G126800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G325500 ankyrin repeat family protein, putative, expressed -
2 Sobic.007G005100 L-asparaginase precursor protein, putative, expressed K13051: ASRGL1, L-asparaginase / beta-aspartyl-peptidase
3 Sobic.007G061600 expressed protein -
4 Sobic.004G037100 cycloartenol synthase, putative, expressed K01853: cycloartenol synthase
5 Sobic.002G168400 RGH2B, putative, expressed -
6 Sobic.008G033800 ABCG protein(PubMedID : 21265893)@pleiotropic drug resistance protein 15, putative, expressed -
7 Sobic.K010100 expressed protein -
8 Sobic.010G192700 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
9 Sobic.003G348900 disease resistance-responsive family protein, putative, expressed -
10 Sobic.004G191901 - K09264: MADS-box transcription factor, plant
11 Sobic.003G249500 expressed protein -
12 Sobic.001G029500 GDP-mannose transporter, putative, expressed K15356: VRG4, GDP-mannose transporter
13 Sobic.004G106500 hydroquinone glucosyltransferase, putative, expressed -
14 Sobic.004G046400 rhodanese-like domain containing protein, putative, expressed -
15 Sobic.010G073000 expressed protein -
16 Sobic.004G243200 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
17 Sobic.005G057401 - -
18 Sobic.005G048400 NBS-LRR disease resistance protein, putative, expressed K13457: RPM1, disease resistance protein RPM1
19 Sobic.010G130400 SAM dependent carboxyl methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
20 Sobic.003G008200 thioesterase family protein, putative, expressed -


Gene co-expression network
sample Sobic002G424500 Sobic002G424500 Sobic002G325500 Sobic002G325500 Sobic002G424500--Sobic002G325500 Sobic007G005100 Sobic007G005100 Sobic002G424500--Sobic007G005100 Sobic007G061600 Sobic007G061600 Sobic002G424500--Sobic007G061600 Sobic004G037100 Sobic004G037100 Sobic002G424500--Sobic004G037100 Sobic002G168400 Sobic002G168400 Sobic002G424500--Sobic002G168400 Sobic008G033800 Sobic008G033800 Sobic002G424500--Sobic008G033800 SobicK010100 SobicK010100 Sobic002G424500--SobicK010100 Sobic010G192700 Sobic010G192700 Sobic002G424500--Sobic010G192700 Sobic003G348900 Sobic003G348900 Sobic002G424500--Sobic003G348900 Sobic001G035300 Sobic001G035300 Sobic002G325500--Sobic001G035300 Sobic002G325500--Sobic002G424500 Sobic002G325500--Sobic007G005100 Sobic004G106500 Sobic004G106500 Sobic002G325500--Sobic004G106500 Sobic001G228900 Sobic001G228900 Sobic002G325500--Sobic001G228900 Sobic002G325500--Sobic007G061600 Sobic008G078800 Sobic008G078800 Sobic002G325500--Sobic008G078800 Sobic008G019900 Sobic008G019900 Sobic002G325500--Sobic008G019900 Sobic002G325500--SobicK010100 Sobic004G187600 Sobic004G187600 Sobic007G005100--Sobic004G187600 Sobic001G070100 Sobic001G070100 Sobic007G005100--Sobic001G070100 Sobic004G089100 Sobic004G089100 Sobic007G005100--Sobic004G089100 Sobic005G048400 Sobic005G048400 Sobic007G005100--Sobic005G048400 Sobic007G005100--Sobic002G325500 Sobic002G028566 Sobic002G028566 Sobic007G005100--Sobic002G028566 Sobic007G005100--Sobic008G078800 Sobic007G005100--Sobic007G061600 Sobic010G032500 Sobic010G032500 Sobic007G005100--Sobic010G032500 Sobic007G061600--Sobic007G005100 Sobic006G246500 Sobic006G246500 Sobic007G061600--Sobic006G246500 Sobic007G061600--Sobic002G424500 Sobic007G061600--Sobic002G325500 Sobic007G061600--Sobic005G048400 Sobic002G281100 Sobic002G281100 Sobic007G061600--Sobic002G281100 Sobic003G008200 Sobic003G008200 Sobic007G061600--Sobic003G008200 Sobic004G188100 Sobic004G188100 Sobic007G061600--Sobic004G188100 Sobic001G506500 Sobic001G506500 Sobic007G061600--Sobic001G506500 Sobic004G037100--Sobic002G168400 Sobic004G191901 Sobic004G191901 Sobic004G037100--Sobic004G191901 Sobic009G092300 Sobic009G092300 Sobic004G037100--Sobic009G092300 Sobic003G249500 Sobic003G249500 Sobic004G037100--Sobic003G249500 Sobic009G074200 Sobic009G074200 Sobic004G037100--Sobic009G074200 Sobic001G494200 Sobic001G494200 Sobic004G037100--Sobic001G494200 Sobic001G487900 Sobic001G487900 Sobic004G037100--Sobic001G487900 Sobic007G137501 Sobic007G137501 Sobic004G037100--Sobic007G137501 Sobic002G138400 Sobic002G138400 Sobic004G037100--Sobic002G138400 Sobic002G168400--Sobic004G037100 Sobic004G046400 Sobic004G046400 Sobic002G168400--Sobic004G046400 Sobic002G168400--Sobic002G424500 Sobic002G168400--Sobic004G191901 Sobic002G168400--Sobic003G249500 Sobic003G212300 Sobic003G212300 Sobic002G168400--Sobic003G212300 Sobic002G168400--Sobic002G325500 Sobic002G168400--Sobic004G106500 Sobic001G299200 Sobic001G299200 Sobic002G168400--Sobic001G299200 Sobic007G138600 Sobic007G138600 Sobic008G033800--Sobic007G138600 Sobic006G135701 Sobic006G135701 Sobic008G033800--Sobic006G135701 Sobic002G220400 Sobic002G220400 Sobic008G033800--Sobic002G220400 Sobic001G450900 Sobic001G450900 Sobic008G033800--Sobic001G450900 Sobic008G033800--Sobic004G191901 Sobic001G118050 Sobic001G118050 Sobic008G033800--Sobic001G118050 Sobic006G206600 Sobic006G206600 Sobic008G033800--Sobic006G206600 Sobic004G019550 Sobic004G019550 Sobic008G033800--Sobic004G019550 Sobic009G218700 Sobic009G218700 Sobic008G033800--Sobic009G218700 Sobic003G080600 Sobic003G080600 SobicK010100--Sobic003G080600 Sobic002G165020 Sobic002G165020 SobicK010100--Sobic002G165020 Sobic010G219800 Sobic010G219800 SobicK010100--Sobic010G219800 Sobic002G235800 Sobic002G235800 SobicK010100--Sobic002G235800 Sobic005G161900 Sobic005G161900 SobicK010100--Sobic005G161900 SobicK010100--Sobic004G106500 SobicK010100--Sobic002G424500 SobicK010100--Sobic002G325500 SobicK010100--Sobic006G246500 Sobic010G229300 Sobic010G229300 Sobic010G192700--Sobic010G229300 Sobic003G186066 Sobic003G186066 Sobic010G192700--Sobic003G186066 Sobic003G120900 Sobic003G120900 Sobic010G192700--Sobic003G120900 Sobic002G153600 Sobic002G153600 Sobic010G192700--Sobic002G153600 Sobic010G192700--Sobic003G348900 Sobic006G232100 Sobic006G232100 Sobic010G192700--Sobic006G232100 Sobic006G112000 Sobic006G112000 Sobic010G192700--Sobic006G112000 Sobic010G192700--Sobic003G008200 Sobic001G097800 Sobic001G097800 Sobic010G192700--Sobic001G097800 Sobic003G348900--Sobic006G112000 Sobic003G348900--Sobic008G033800 Sobic001G207301 Sobic001G207301 Sobic003G348900--Sobic001G207301 Sobic004G291300 Sobic004G291300 Sobic003G348900--Sobic004G291300 Sobic006G205800 Sobic006G205800 Sobic003G348900--Sobic006G205800 Sobic003G348900--Sobic004G191901 Sobic002G076350 Sobic002G076350 Sobic003G348900--Sobic002G076350 Sobic006G146700 Sobic006G146700 Sobic003G348900--Sobic006G146700 Sobic001G136850 Sobic001G136850 Sobic003G348900--Sobic001G136850
Octagon: transcription factors


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